RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 COQ4Q9Y3A0 265 aa10.15□□□□□ -0.78
SND1-213ENST00000486037 CENPEQ02224 2701 aa10.15□□□□□ -0.78
SND1-213ENST00000486037 GJB6O95452 261 aa10.14□□□□□ -0.79
SND1-213ENST00000486037 C4BPAP04003 597 aaKnown RBP10.14□□□□□ -0.79
SND1-213ENST00000486037 CYBBP04839 570 aa10.14□□□□□ -0.79
SND1-213ENST00000486037 GP1BAP07359 652 aa10.14□□□□□ -0.79
SND1-213ENST00000486037 TPM1P09493 284 aa10.14□□□□□ -0.79
SND1-213ENST00000486037 DLDP09622 509 aaKnown RBP10.14□□□□□ -0.79
SND1-213ENST00000486037 THEGLP0DJG4 465 aa10.14□□□□□ -0.79
SND1-213ENST00000486037 PABPC1P11940 636 aaKnown RBP10.14□□□□□ -0.79
SND1-213ENST00000486037 TNNI1P19237 187 aa10.14□□□□□ -0.79
SND1-213ENST00000486037 FECHP22830 423 aa10.14□□□□□ -0.79
SND1-213ENST00000486037 ADORA2BP29275 332 aa10.14□□□□□ -0.79
SND1-213ENST00000486037 SLC8A1P32418 973 aa10.14□□□□□ -0.79
SND1-213ENST00000486037 PSMD8P48556 350 aa10.14□□□□□ -0.79
SND1-213ENST00000486037 POLR2FP61218 127 aaKnown RBP10.14□□□□□ -0.79
SND1-213ENST00000486037 ZBED6P86452 979 aa10.14□□□□□ -0.79
SND1-213ENST00000486037 ZACNQ401N2 412 aa10.14□□□□□ -0.79
SND1-213ENST00000486037 SLC45A4Q5BKX6 768 aa10.14□□□□□ -0.79
SND1-213ENST00000486037 C9orf64Q5T6V5 341 aa10.14□□□□□ -0.79
SND1-213ENST00000486037 E4F1Q66K89 784 aaPredicted RBP10.14□□□□□ -0.79
SND1-213ENST00000486037 KRT39Q6A163 491 aa10.14□□□□□ -0.79
SND1-213ENST00000486037 GUSBP11Q6P575 273 aa10.14□□□□□ -0.79
SND1-213ENST00000486037 TRIM65Q6PJ69 517 aa10.14□□□□□ -0.79
SND1-213ENST00000486037 CLEC20AQ6ZU45 233 aa10.14□□□□□ -0.79
SND1-213ENST00000486037 SV2AQ7L0J3 742 aa10.14□□□□□ -0.79
SND1-213ENST00000486037 VASH2Q86V25 355 aa10.14□□□□□ -0.79
SND1-213ENST00000486037 WDR49Q8IV35 697 aa10.14□□□□□ -0.79
SND1-213ENST00000486037 ZNF564Q8TBZ8 553 aaPredicted RBP10.14□□□□□ -0.79
SND1-213ENST00000486037 TAS1R2Q8TE23 839 aa10.14□□□□□ -0.79
SND1-213ENST00000486037 WFIKKN2Q8TEU8 576 aa10.14□□□□□ -0.79
SND1-213ENST00000486037 IQCDQ96DY2 449 aa10.14□□□□□ -0.79
SND1-213ENST00000486037 MRGPRX3Q96LB0 322 aa10.14□□□□□ -0.79
SND1-213ENST00000486037 FAM129BQ96TA1 746 aa10.14□□□□□ -0.79
SND1-213ENST00000486037 DNAJC7Q99615 494 aa10.14□□□□□ -0.79
SND1-213ENST00000486037 MYOCQ99972 504 aa10.14□□□□□ -0.79
SND1-213ENST00000486037 OMDQ99983 421 aa10.14□□□□□ -0.79
SND1-213ENST00000486037 ABCG4Q9H172 646 aa10.14□□□□□ -0.79
SND1-213ENST00000486037 LRRC4CQ9HCJ2 640 aa10.14□□□□□ -0.79
SND1-213ENST00000486037 NLRC4Q9NPP4 1024 aa10.14□□□□□ -0.79
SND1-213ENST00000486037 GEMIN8Q9NWZ8 242 aaKnown RBP10.14□□□□□ -0.79
SND1-213ENST00000486037 FZD4Q9ULV1 537 aa10.14□□□□□ -0.79
SND1-213ENST00000486037 PLAAQ9Y263 795 aa10.14□□□□□ -0.79
SND1-213ENST00000486037 LUC7L2Q9Y383 392 aaKnown RBP10.14□□□□□ -0.79
SND1-213ENST00000486037 PCDHGA4Q9Y5G9 962 aa10.14□□□□□ -0.79
SND1-213ENST00000486037 FHOD1Q9Y613 1164 aa10.14□□□□□ -0.79
SND1-213ENST00000486037 NYNRINQ9P2P1 1898 aaKnown RBP10.13□□□□□ -0.79
SND1-213ENST00000486037 SLC12A8A0AV02 714 aa10.13□□□□□ -0.79
SND1-213ENST00000486037 TTC34A8MYJ7 566 aa10.13□□□□□ -0.79
SND1-213ENST00000486037 K7ESM1 405 aa10.13□□□□□ -0.79
SND1-213ENST00000486037 RTN2O75298 545 aa10.13□□□□□ -0.79
SND1-213ENST00000486037 PIAS2O75928 621 aa10.13□□□□□ -0.79
SND1-213ENST00000486037 VNN1O95497 513 aa10.13□□□□□ -0.79
SND1-213ENST00000486037 RNF224P0DH78 156 aa10.13□□□□□ -0.79
SND1-213ENST00000486037 SKILP12757 684 aa10.13□□□□□ -0.79
SND1-213ENST00000486037 UCHL3P15374 230 aa10.13□□□□□ -0.79
SND1-213ENST00000486037 SLC5A2P31639 672 aa10.13□□□□□ -0.79
SND1-213ENST00000486037 DRD3P35462 400 aa10.13□□□□□ -0.79
SND1-213ENST00000486037 CTSOP43234 321 aaPredicted RBP10.13□□□□□ -0.79
SND1-213ENST00000486037 E2F5Q15329 346 aa10.13□□□□□ -0.79
SND1-213ENST00000486037 SURF1Q15526 300 aa10.13□□□□□ -0.79
SND1-213ENST00000486037 CDKN3Q16667 212 aa10.13□□□□□ -0.79
SND1-213ENST00000486037 ZNF542PQ5EBM4 170 aa10.13□□□□□ -0.79
SND1-213ENST00000486037 PERM1Q5SV97 790 aa10.13□□□□□ -0.79
SND1-213ENST00000486037 WDR59Q6PJI9 974 aa10.13□□□□□ -0.79
SND1-213ENST00000486037 ARHGEF19Q8IW93 802 aa10.13□□□□□ -0.79
SND1-213ENST00000486037 AHI1Q8N157 1196 aa10.13□□□□□ -0.79
SND1-213ENST00000486037 OR8K1Q8NGG5 319 aa10.13□□□□□ -0.79
SND1-213ENST00000486037 LIN37Q96GY3 246 aaPredicted RBP10.13□□□□□ -0.79
SND1-213ENST00000486037 LMLNQ96KR4 655 aa10.13□□□□□ -0.79
SND1-213ENST00000486037 BAG1Q99933 345 aaPredicted RBP10.13□□□□□ -0.79
SND1-213ENST00000486037 NAA15Q9BXJ9 866 aaKnown RBP10.13□□□□□ -0.79
SND1-213ENST00000486037 DCLK3Q9C098 648 aa10.13□□□□□ -0.79
SND1-213ENST00000486037 SUN2Q9UH99 717 aa10.13□□□□□ -0.79
SND1-213ENST00000486037 CYTH4Q9UIA0 394 aa10.13□□□□□ -0.79
SND1-213ENST00000486037 INTS6Q9UL03 887 aaKnown RBP10.13□□□□□ -0.79
SND1-213ENST00000486037 SCML1Q9UN30 329 aa10.13□□□□□ -0.79
SND1-213ENST00000486037 ITPR3Q14573 2671 aa10.12□□□□□ -0.79
SND1-213ENST00000486037 TBC1D3DA0A087WVF3 549 aa10.12□□□□□ -0.79
SND1-213ENST00000486037 TBC1D3IA0A087WXS9 549 aa10.12□□□□□ -0.79
SND1-213ENST00000486037 TBC1D3EA0A087X179 549 aa10.12□□□□□ -0.79
SND1-213ENST00000486037 TBC1D3KA0A087X1G2 549 aa10.12□□□□□ -0.79
SND1-213ENST00000486037 TBC1D3FA6NER0 549 aaPredicted RBP10.12□□□□□ -0.79
SND1-213ENST00000486037 LRRC53A6NM62 1247 aa10.12□□□□□ -0.79
SND1-213ENST00000486037 TBC1D3LB9A6J9 549 aa10.12□□□□□ -0.79
SND1-213ENST00000486037 STAU1O95793 577 aaKnown RBP10.12□□□□□ -0.79
SND1-213ENST00000486037 HLA-DRAP01903 254 aa10.12□□□□□ -0.79
SND1-213ENST00000486037 ITGA2BP08514 1039 aa10.12□□□□□ -0.79
SND1-213ENST00000486037 TBC1D3HP0C7X1 549 aa10.12□□□□□ -0.79
SND1-213ENST00000486037 GOT1P17174 413 aa10.12□□□□□ -0.79
SND1-213ENST00000486037 KIF11P52732 1056 aa10.12□□□□□ -0.79
SND1-213ENST00000486037 JAM2P57087 298 aa10.12□□□□□ -0.79
SND1-213ENST00000486037 COG7P83436 770 aa10.12□□□□□ -0.79
SND1-213ENST00000486037 PDE4CQ08493 712 aa10.12□□□□□ -0.79
SND1-213ENST00000486037 CETN1Q12798 172 aa10.12□□□□□ -0.79
SND1-213ENST00000486037 HNRNPA1L2Q32P51 320 aaKnown RBP10.12□□□□□ -0.79
SND1-213ENST00000486037 MPPE1Q53F39 396 aa10.12□□□□□ -0.79
SND1-213ENST00000486037 TBC1D3GQ6DHY5 549 aa10.12□□□□□ -0.79
SND1-213ENST00000486037 TBC1D3CQ6IPX1 549 aa10.12□□□□□ -0.79
SND1-213ENST00000486037 SND1Q7KZF4 910 aaKnown RBP eCLIP10.12□□□□□ -0.795e-11■■■□□ 17.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms