RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 IL27RAQ6UWB1 636 aa7.18□□□□□ -1.26
VPS50-218ENST00000485994 DSG4Q86SJ6 1040 aa7.18□□□□□ -1.26
VPS50-218ENST00000485994 NLRP14Q86W24 1093 aa7.18□□□□□ -1.26
VPS50-218ENST00000485994 RGL4Q8IZJ4 473 aa7.18□□□□□ -1.26
VPS50-218ENST00000485994 ZNF366Q8N895 744 aa7.18□□□□□ -1.26
VPS50-218ENST00000485994 DCAF4L2Q8NA75 395 aa7.18□□□□□ -1.26
VPS50-218ENST00000485994 JOSD2Q8TAC2 188 aa7.18□□□□□ -1.26
VPS50-218ENST00000485994 FNIP1Q8TF40 1166 aa7.18□□□□□ -1.26
VPS50-218ENST00000485994 ISG20Q96AZ6 181 aaKnown RBP7.18□□□□□ -1.26
VPS50-218ENST00000485994 PSMB7Q99436 277 aa7.18□□□□□ -1.26
VPS50-218ENST00000485994 EIF3CQ99613 913 aaKnown RBP7.18□□□□□ -1.26
VPS50-218ENST00000485994 NCAPGQ9BPX3 1015 aa7.18□□□□□ -1.26
VPS50-218ENST00000485994 C11orf70Q9BRQ4 267 aa7.18□□□□□ -1.26
VPS50-218ENST00000485994 CNPY3Q9BT09 278 aa7.18□□□□□ -1.26
VPS50-218ENST00000485994 SELENOOQ9BVL4 669 aa7.18□□□□□ -1.26
VPS50-218ENST00000485994 ACE2Q9BYF1 805 aaPredicted RBP7.18□□□□□ -1.26
VPS50-218ENST00000485994 ZYG11BQ9C0D3 744 aa7.18□□□□□ -1.26
VPS50-218ENST00000485994 CEP44Q9C0F1 390 aa7.18□□□□□ -1.26
VPS50-218ENST00000485994 ISCUQ9H1K1 167 aa7.18□□□□□ -1.26
VPS50-218ENST00000485994 MAGEH1Q9H213 219 aa7.18□□□□□ -1.26
VPS50-218ENST00000485994 NEUROG2Q9H2A3 272 aa7.18□□□□□ -1.26
VPS50-218ENST00000485994 METTL5Q9NRN9 209 aaKnown RBP7.18□□□□□ -1.26
VPS50-218ENST00000485994 TMEM248Q9NWD8 314 aa7.18□□□□□ -1.26
VPS50-218ENST00000485994 FBXL12Q9NXK8 326 aa7.18□□□□□ -1.26
VPS50-218ENST00000485994 DONSONQ9NYP3 566 aa7.18□□□□□ -1.26
VPS50-218ENST00000485994 SLC25A13Q9UJS0 675 aa7.18□□□□□ -1.26
VPS50-218ENST00000485994 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.18□□□□□ -1.26
VPS50-218ENST00000485994 PCDHGB2Q9Y5G2 931 aa7.18□□□□□ -1.26
VPS50-218ENST00000485994 BZW2Q9Y6E2 419 aaKnown RBP7.18□□□□□ -1.26
VPS50-218ENST00000485994 GOLGA4Q13439 2230 aaKnown RBP7.17□□□□□ -1.26
VPS50-218ENST00000485994 A0A0D9SEW6 157 aa7.17□□□□□ -1.26
VPS50-218ENST00000485994 A0A1W2PPC4 97 aa7.17□□□□□ -1.26
VPS50-218ENST00000485994 ANKRD62A6NC57 917 aa7.17□□□□□ -1.26
VPS50-218ENST00000485994 LRRC72A6NJI9 287 aa7.17□□□□□ -1.26
VPS50-218ENST00000485994 LRRC53A6NM62 1247 aa7.17□□□□□ -1.26
VPS50-218ENST00000485994 MID1O15344 667 aa7.17□□□□□ -1.26
VPS50-218ENST00000485994 LATO43561 262 aa7.17□□□□□ -1.26
VPS50-218ENST00000485994 OPHN1O60890 802 aa7.17□□□□□ -1.26
VPS50-218ENST00000485994 SRGAP2O75044 1071 aa7.17□□□□□ -1.26
VPS50-218ENST00000485994 RTN2O75298 545 aa7.17□□□□□ -1.26
VPS50-218ENST00000485994 ZNF821O75541 412 aaPredicted RBP7.17□□□□□ -1.26
VPS50-218ENST00000485994 RHOCP08134 193 aa7.17□□□□□ -1.26
VPS50-218ENST00000485994 PLEKP08567 350 aaPredicted RBP7.17□□□□□ -1.26
VPS50-218ENST00000485994 SRCP12931 536 aa7.17□□□□□ -1.26
VPS50-218ENST00000485994 GPD1P21695 349 aa7.17□□□□□ -1.26
VPS50-218ENST00000485994 MAOBP27338 520 aa7.17□□□□□ -1.26
VPS50-218ENST00000485994 DRD3P35462 400 aa7.17□□□□□ -1.26
VPS50-218ENST00000485994 GRIA4P48058 902 aa7.17□□□□□ -1.26
VPS50-218ENST00000485994 IRAK1P51617 712 aa7.17□□□□□ -1.26
VPS50-218ENST00000485994 AFF3P51826 1226 aaKnown RBP7.17□□□□□ -1.26
VPS50-218ENST00000485994 ATXN3P54252 364 aaPredicted RBP7.17□□□□□ -1.26
VPS50-218ENST00000485994 RACK1P63244 317 aaKnown RBP7.17□□□□□ -1.26
VPS50-218ENST00000485994 ATP11AP98196 1134 aa7.17□□□□□ -1.26
VPS50-218ENST00000485994 FANCCQ00597 558 aa7.17□□□□□ -1.26
VPS50-218ENST00000485994 GNA12Q03113 381 aa7.17□□□□□ -1.26
VPS50-218ENST00000485994 MAMLD1Q13495 774 aa7.17□□□□□ -1.26
VPS50-218ENST00000485994 ACAP1Q15027 740 aa7.17□□□□□ -1.26
VPS50-218ENST00000485994 C15orf59Q2T9L4 293 aaPredicted RBP7.17□□□□□ -1.26
VPS50-218ENST00000485994 N4BP2L1Q5TBK1 243 aaPredicted RBP7.17□□□□□ -1.26
VPS50-218ENST00000485994 SH3PXD2AQ5TCZ1 1133 aa7.17□□□□□ -1.26
VPS50-218ENST00000485994 SFMBT2Q5VUG0 894 aa7.17□□□□□ -1.26
VPS50-218ENST00000485994 KIAA0895LQ68EN5 471 aa7.17□□□□□ -1.26
VPS50-218ENST00000485994 RETSATQ6NUM9 610 aa7.17□□□□□ -1.26
VPS50-218ENST00000485994 NEK5Q6P3R8 708 aa7.17□□□□□ -1.26
VPS50-218ENST00000485994 LRSAM1Q6UWE0 723 aa7.17□□□□□ -1.26
VPS50-218ENST00000485994 ARMCX6Q7L4S7 300 aa7.17□□□□□ -1.26
VPS50-218ENST00000485994 SLFN11Q7Z7L1 901 aa7.17□□□□□ -1.26
VPS50-218ENST00000485994 CIR1Q86X95 450 aaPredicted RBP7.17□□□□□ -1.26
VPS50-218ENST00000485994 FAM131BQ86XD5 332 aa7.17□□□□□ -1.26
VPS50-218ENST00000485994 PSTKQ8IV42 348 aaKnown RBP7.17□□□□□ -1.26
VPS50-218ENST00000485994 MMAAQ8IVH4 418 aaKnown RBP7.17□□□□□ -1.26
VPS50-218ENST00000485994 DRC7Q8IY82 874 aa7.17□□□□□ -1.26
VPS50-218ENST00000485994 STK40Q8N2I9 435 aa7.17□□□□□ -1.26
VPS50-218ENST00000485994 DEFB119Q8N690 84 aa7.17□□□□□ -1.26
VPS50-218ENST00000485994 EMC1Q8N766 993 aa7.17□□□□□ -1.26
VPS50-218ENST00000485994 OR2T34Q8NGX1 318 aa7.17□□□□□ -1.26
VPS50-218ENST00000485994 OR8D1Q8WZ84 308 aa7.17□□□□□ -1.26
VPS50-218ENST00000485994 BIRC7Q96CA5 298 aa7.17□□□□□ -1.26
VPS50-218ENST00000485994 OMDQ99983 421 aa7.17□□□□□ -1.26
VPS50-218ENST00000485994 ORAI3Q9BRQ5 295 aa7.17□□□□□ -1.26
VPS50-218ENST00000485994 MTG2Q9H4K7 406 aa7.17□□□□□ -1.26
VPS50-218ENST00000485994 SLC32A1Q9H598 525 aa7.17□□□□□ -1.26
VPS50-218ENST00000485994 C6orf106Q9H6K1 298 aaPredicted RBP7.17□□□□□ -1.26
VPS50-218ENST00000485994 CBX8Q9HC52 389 aa7.17□□□□□ -1.26
VPS50-218ENST00000485994 PARVAQ9NVD7 372 aa7.17□□□□□ -1.26
VPS50-218ENST00000485994 MPP6Q9NZW5 540 aa7.17□□□□□ -1.26
VPS50-218ENST00000485994 EIF2B4Q9UI10 523 aaKnown RBP7.17□□□□□ -1.26
VPS50-218ENST00000485994 VPS51Q9UID3 782 aa7.17□□□□□ -1.26
VPS50-218ENST00000485994 VPS28Q9UK41 221 aa7.17□□□□□ -1.26
VPS50-218ENST00000485994 FZD10Q9ULW2 581 aa7.17□□□□□ -1.26
VPS50-218ENST00000485994 CAPN11Q9UMQ6 739 aa7.17□□□□□ -1.26
VPS50-218ENST00000485994 CHD8Q9HCK8 2581 aa7.16□□□□□ -1.26
VPS50-218ENST00000485994 SYCE3A1L190 88 aa7.16□□□□□ -1.26
VPS50-218ENST00000485994 FAM221BA6H8Z2 402 aa7.16□□□□□ -1.26
VPS50-218ENST00000485994 TMEM191CA6NGB0 347 aa7.16□□□□□ -1.26
VPS50-218ENST00000485994 ZSCAN5CA6NGD5 496 aaPredicted RBP7.16□□□□□ -1.26
VPS50-218ENST00000485994 MEI4A8MW99 385 aa7.16□□□□□ -1.26
VPS50-218ENST00000485994 C1QTNF3-AMACRE9PGA6 284 aa7.16□□□□□ -1.26
VPS50-218ENST00000485994 DDX3XO00571 662 aaKnown RBP eCLIP7.16□□□□□ -1.26
VPS50-218ENST00000485994 VILLO15195 856 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms