RNA–Protein interactions for RNA: ENST00000485403.6

ERCC2-205, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 1,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-205ENST00000485403 XRCC4Q13426 336 aa18.9■□□□□ 0.62
ERCC2-205ENST00000485403 EIF4HQ15056 248 aaKnown RBP18.9■□□□□ 0.62
ERCC2-205ENST00000485403 PDK1Q15118 436 aa18.9■□□□□ 0.62
ERCC2-205ENST00000485403 CCDC70Q6NSX1 233 aa18.9■□□□□ 0.62
ERCC2-205ENST00000485403 C8orf74Q6P047 294 aa18.9■□□□□ 0.62
ERCC2-205ENST00000485403 ADIPOR2Q86V24 386 aa18.9■□□□□ 0.62
ERCC2-205ENST00000485403 CCDC117Q8IWD4 279 aaPredicted RBP18.9■□□□□ 0.62
ERCC2-205ENST00000485403 AHI1Q8N157 1196 aa18.9■□□□□ 0.62
ERCC2-205ENST00000485403 USP33Q8TEY7 942 aa18.9■□□□□ 0.62
ERCC2-205ENST00000485403 NDFIP2Q9NV92 336 aa18.9■□□□□ 0.62
ERCC2-205ENST00000485403 PCYOX1Q9UHG3 505 aa18.9■□□□□ 0.62
ERCC2-205ENST00000485403 AMACRQ9UHK6 382 aa18.9■□□□□ 0.62
ERCC2-205ENST00000485403 MUC22E2RYF6 1773 aaPredicted RBP18.9■□□□□ 0.62
ERCC2-205ENST00000485403 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.9■□□□□ 0.62
ERCC2-205ENST00000485403 MX2P20592 715 aa18.9■□□□□ 0.62
ERCC2-205ENST00000485403 MRPS25P82663 173 aaKnown RBP18.9■□□□□ 0.62
ERCC2-205ENST00000485403 MRPS21P82921 87 aaKnown RBP18.9■□□□□ 0.62
ERCC2-205ENST00000485403 DR1Q01658 176 aa18.9■□□□□ 0.62
ERCC2-205ENST00000485403 LMNB2Q03252 620 aa18.9■□□□□ 0.62
ERCC2-205ENST00000485403 ZNF177Q13360 481 aaPredicted RBP18.9■□□□□ 0.62
ERCC2-205ENST00000485403 SLC12A1Q13621 1099 aa18.9■□□□□ 0.62
ERCC2-205ENST00000485403 OASLQ15646 514 aaKnown RBP18.9■□□□□ 0.62
ERCC2-205ENST00000485403 MAATS1Q7Z4T9 603 aa18.9■□□□□ 0.62
ERCC2-205ENST00000485403 SETD3Q86TU7 594 aaPredicted RBP18.9■□□□□ 0.62
ERCC2-205ENST00000485403 CDKL3Q8IVW4 592 aaPredicted RBP18.9■□□□□ 0.62
ERCC2-205ENST00000485403 TP53INP2Q8IXH6 220 aa18.9■□□□□ 0.62
ERCC2-205ENST00000485403 UMODL1-AS1Q8N2C9 162 aa18.9■□□□□ 0.62
ERCC2-205ENST00000485403 GRK7Q8WTQ7 553 aa18.9■□□□□ 0.62
ERCC2-205ENST00000485403 UBXN4Q92575 508 aa18.9■□□□□ 0.62
ERCC2-205ENST00000485403 OLFM3Q96PB7 478 aa18.9■□□□□ 0.62
ERCC2-205ENST00000485403 LRRC1Q9BTT6 524 aa18.9■□□□□ 0.62
ERCC2-205ENST00000485403 C10orf88Q9H8K7 445 aa18.9■□□□□ 0.62
ERCC2-205ENST00000485403 KIAA1522Q9P206 1035 aaPredicted RBP18.9■□□□□ 0.62
ERCC2-205ENST00000485403 FEZ2Q9UHY8 353 aaPredicted RBP18.9■□□□□ 0.62
ERCC2-205ENST00000485403 INTS6Q9UL03 887 aaKnown RBP18.9■□□□□ 0.62
ERCC2-205ENST00000485403 HACD1B0YJ81 288 aa18.89■□□□□ 0.61
ERCC2-205ENST00000485403 DFFAO00273 331 aa18.89■□□□□ 0.61
ERCC2-205ENST00000485403 PPP1R12AO14974 1030 aaPredicted RBP18.89■□□□□ 0.61
ERCC2-205ENST00000485403 RAD51CO43502 376 aa18.89■□□□□ 0.61
ERCC2-205ENST00000485403 ECEL1O95672 775 aa18.89■□□□□ 0.61
ERCC2-205ENST00000485403 ITGAVP06756 1048 aa18.89■□□□□ 0.61
ERCC2-205ENST00000485403 OR1E1P30953 314 aa18.89■□□□□ 0.61
ERCC2-205ENST00000485403 NDST2P52849 883 aa18.89■□□□□ 0.61
ERCC2-205ENST00000485403 PLK1P53350 603 aa18.89■□□□□ 0.61
ERCC2-205ENST00000485403 NUBP1P53384 320 aa18.89■□□□□ 0.61
ERCC2-205ENST00000485403 TERF1P54274 439 aa18.89■□□□□ 0.61
ERCC2-205ENST00000485403 OXCT1P55809 520 aa18.89■□□□□ 0.61
ERCC2-205ENST00000485403 GALNT2Q10471 571 aa18.89■□□□□ 0.61
ERCC2-205ENST00000485403 MTAPQ13126 283 aa18.89■□□□□ 0.61
ERCC2-205ENST00000485403 DHX34Q14147 1143 aaKnown RBP18.89■□□□□ 0.61
ERCC2-205ENST00000485403 DMC1Q14565 340 aa18.89■□□□□ 0.61
ERCC2-205ENST00000485403 FUT11Q495W5 492 aa18.89■□□□□ 0.61
ERCC2-205ENST00000485403 GLE1Q53GS7 698 aaKnown RBP18.89■□□□□ 0.61
ERCC2-205ENST00000485403 EMC10Q5UCC4 262 aa18.89■□□□□ 0.61
ERCC2-205ENST00000485403 AFMIDQ63HM1 303 aa18.89■□□□□ 0.61
ERCC2-205ENST00000485403 PKN3Q6P5Z2 889 aa18.89■□□□□ 0.61
ERCC2-205ENST00000485403 B4GALNT4Q76KP1 1039 aa18.89■□□□□ 0.61
ERCC2-205ENST00000485403 GSTA5Q7RTV2 222 aa18.89■□□□□ 0.61
ERCC2-205ENST00000485403 ARHGAP12Q8IWW6 846 aa18.89■□□□□ 0.61
ERCC2-205ENST00000485403 SPEM1Q8N4L4 309 aa18.89■□□□□ 0.61
ERCC2-205ENST00000485403 MYRIPQ8NFW9 859 aa18.89■□□□□ 0.61
ERCC2-205ENST00000485403 OR52K2Q8NGK3 314 aa18.89■□□□□ 0.61
ERCC2-205ENST00000485403 TFB1MQ8WVM0 346 aaKnown RBP18.89■□□□□ 0.61
ERCC2-205ENST00000485403 QKIQ96PU8 341 aaKnown RBP eCLIP18.89■□□□□ 0.61
ERCC2-205ENST00000485403 TMEM121Q9BTD3 319 aa18.89■□□□□ 0.61
ERCC2-205ENST00000485403 SLC39A8Q9C0K1 460 aa18.89■□□□□ 0.61
ERCC2-205ENST00000485403 ELOVL2Q9NXB9 296 aa18.89■□□□□ 0.61
ERCC2-205ENST00000485403 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.89■□□□□ 0.61
ERCC2-205ENST00000485403 V9GYY5 206 aaPredicted RBP18.89■□□□□ 0.61
ERCC2-205ENST00000485403 CKAP5Q14008 2032 aa18.88■□□□□ 0.61
ERCC2-205ENST00000485403 TIMM44O43615 452 aa18.88■□□□□ 0.61
ERCC2-205ENST00000485403 RHOXF2BP0C7M4 288 aa18.88■□□□□ 0.61
ERCC2-205ENST00000485403 HNRNPLP14866 589 aaKnown RBP eCLIP18.88■□□□□ 0.61
ERCC2-205ENST00000485403 PTGIRP43119 386 aa18.88■□□□□ 0.61
ERCC2-205ENST00000485403 SEC13P55735 322 aa18.88■□□□□ 0.61
ERCC2-205ENST00000485403 PLEKHG6Q3KR16 790 aa18.88■□□□□ 0.61
ERCC2-205ENST00000485403 HSF5Q4G112 596 aaPredicted RBP18.88■□□□□ 0.61
ERCC2-205ENST00000485403 C2orf27AQ580R0 203 aa18.88■□□□□ 0.61
ERCC2-205ENST00000485403 IL17RCQ8NAC3 791 aa18.88■□□□□ 0.61
ERCC2-205ENST00000485403 DTWD2Q8NBA8 298 aa18.88■□□□□ 0.61
ERCC2-205ENST00000485403 CCNYQ8ND76 341 aa18.88■□□□□ 0.61
ERCC2-205ENST00000485403 RPLP0P6Q8NHW5 317 aa18.88■□□□□ 0.61
ERCC2-205ENST00000485403 LRRN4Q8WUT4 740 aa18.88■□□□□ 0.61
ERCC2-205ENST00000485403 TTC17Q96AE7 1141 aa18.88■□□□□ 0.61
ERCC2-205ENST00000485403 ALG14Q96F25 216 aa18.88■□□□□ 0.61
ERCC2-205ENST00000485403 RHOXF2Q9BQY4 288 aa18.88■□□□□ 0.61
ERCC2-205ENST00000485403 NOL6Q9H6R4 1146 aaKnown RBP18.88■□□□□ 0.61
ERCC2-205ENST00000485403 OR51B4Q9Y5P0 310 aa18.88■□□□□ 0.61
ERCC2-205ENST00000485403 BCLAF3A2AJT9 711 aaKnown RBP18.87■□□□□ 0.61
ERCC2-205ENST00000485403 CFAP69A5D8W1 941 aa18.87■□□□□ 0.61
ERCC2-205ENST00000485403 FAM187AA6NFU0 413 aa18.87■□□□□ 0.61
ERCC2-205ENST00000485403 RASA4BC9J798 803 aa18.87■□□□□ 0.61
ERCC2-205ENST00000485403 SGK1O00141 431 aa18.87■□□□□ 0.61
ERCC2-205ENST00000485403 TTI1O43156 1089 aa18.87■□□□□ 0.61
ERCC2-205ENST00000485403 RASA4O43374 803 aa18.87■□□□□ 0.61
ERCC2-205ENST00000485403 RAMP2O60895 175 aa18.87■□□□□ 0.61
ERCC2-205ENST00000485403 ATG13O75143 517 aa18.87■□□□□ 0.61
ERCC2-205ENST00000485403 GAS8O95995 478 aa18.87■□□□□ 0.61
ERCC2-205ENST00000485403 CSKP41240 450 aa18.87■□□□□ 0.61
ERCC2-205ENST00000485403 SLC45A4Q5BKX6 768 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms