RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-223	ENST00000485024	STAM	Q92783	540 aa		4.26	□□□□□ -1.73
VPS8-223	ENST00000485024	CTHRC1	Q96CG8	243 aa		4.26	□□□□□ -1.73
VPS8-223	ENST00000485024	AGXT2	Q9BYV1	514 aa		4.26	□□□□□ -1.73
VPS8-223	ENST00000485024	TAOK3	Q9H2K8	898 aa		4.26	□□□□□ -1.73
VPS8-223	ENST00000485024	PLEKHA2	Q9HB19	425 aa		4.26	□□□□□ -1.73
VPS8-223	ENST00000485024	PDE11A	Q9HCR9	933 aa		4.26	□□□□□ -1.73
VPS8-223	ENST00000485024	ARHGEF3	Q9NR81	526 aa		4.26	□□□□□ -1.73
VPS8-223	ENST00000485024	ALKBH4	Q9NXW9	302 aa		4.26	□□□□□ -1.73
VPS8-223	ENST00000485024	TFCP2L1	Q9NZI6	479 aa		4.26	□□□□□ -1.73
VPS8-223	ENST00000485024	TTLL3	Q9Y4R7	772 aa		4.26	□□□□□ -1.73
VPS8-223	ENST00000485024	PCDHA10	Q9Y5I2	948 aa		4.26	□□□□□ -1.73
VPS8-223	ENST00000485024	ATRN	O75882	1429 aa		4.26	□□□□□ -1.73
VPS8-223	ENST00000485024	ADAMTS12	P58397	1594 aa		4.26	□□□□□ -1.73
VPS8-223	ENST00000485024	PARD3	Q8TEW0	1356 aa		4.26	□□□□□ -1.73
VPS8-223	ENST00000485024	UTRN	P46939	3433 aa		4.25	□□□□□ -1.73
VPS8-223	ENST00000485024	CYP3A7-CYP3A51P	A0A087WV96	503 aa		4.25	□□□□□ -1.73
VPS8-223	ENST00000485024	SMIM35	A0A1B0GVV1	85 aa		4.25	□□□□□ -1.73
VPS8-223	ENST00000485024	GAGE10	A6NGK3	116 aa		4.25	□□□□□ -1.73
VPS8-223	ENST00000485024	SOCS2	O14508	198 aa		4.25	□□□□□ -1.73
VPS8-223	ENST00000485024	SPRY2	O43597	315 aa		4.25	□□□□□ -1.73
VPS8-223	ENST00000485024	TTLL1	O95922	423 aa		4.25	□□□□□ -1.73
VPS8-223	ENST00000485024	SCGB1D1	O95968	90 aa		4.25	□□□□□ -1.73
VPS8-223	ENST00000485024	TUBB4A	P04350	444 aa		4.25	□□□□□ -1.73
VPS8-223	ENST00000485024	HNRNPC	P07910	306 aa	Known RBP eCLIP	4.25	□□□□□ -1.73
VPS8-223	ENST00000485024	PDHA1	P08559	390 aa		4.25	□□□□□ -1.73
VPS8-223	ENST00000485024	TNFRSF1B	P20333	461 aa		4.25	□□□□□ -1.73
VPS8-223	ENST00000485024	CYP3A7	P24462	503 aa		4.25	□□□□□ -1.73
VPS8-223	ENST00000485024	HNRNPM	P52272	730 aa	Known RBP eCLIP	4.25	□□□□□ -1.73
VPS8-223	ENST00000485024	ARF3	P61204	181 aa	Predicted RBP	4.25	□□□□□ -1.73
VPS8-223	ENST00000485024	DCAF7	P61962	342 aa		4.25	□□□□□ -1.73
VPS8-223	ENST00000485024	ARF1	P84077	181 aa	Known RBP	4.25	□□□□□ -1.73
VPS8-223	ENST00000485024	E2F1	Q01094	437 aa		4.25	□□□□□ -1.73
VPS8-223	ENST00000485024	SP2	Q02086	613 aa		4.25	□□□□□ -1.73
VPS8-223	ENST00000485024	SEC23B	Q15437	767 aa		4.25	□□□□□ -1.73
VPS8-223	ENST00000485024	NFIL3	Q16649	462 aa		4.25	□□□□□ -1.73
VPS8-223	ENST00000485024	RUNDC3A	Q59EK9	446 aa		4.25	□□□□□ -1.73
VPS8-223	ENST00000485024	SYNE3	Q6ZMZ3	975 aa		4.25	□□□□□ -1.73
VPS8-223	ENST00000485024	ZNF804A	Q7Z570	1209 aa		4.25	□□□□□ -1.73
VPS8-223	ENST00000485024	RPAP2	Q8IXW5	612 aa	Predicted RBP	4.25	□□□□□ -1.73
VPS8-223	ENST00000485024	PDILT	Q8N807	584 aa		4.25	□□□□□ -1.73
VPS8-223	ENST00000485024	C12orf76	Q8N812	135 aa	Predicted RBP	4.25	□□□□□ -1.73
VPS8-223	ENST00000485024	ENDOV	Q8N8Q3	282 aa	Known RBP	4.25	□□□□□ -1.73
VPS8-223	ENST00000485024	TNIP2	Q8NFZ5	429 aa		4.25	□□□□□ -1.73
VPS8-223	ENST00000485024	NFKBID	Q8NI38	313 aa		4.25	□□□□□ -1.73
VPS8-223	ENST00000485024	LRRC59	Q96AG4	307 aa	Known RBP	4.25	□□□□□ -1.73
VPS8-223	ENST00000485024	ARRDC3	Q96B67	414 aa		4.25	□□□□□ -1.73
VPS8-223	ENST00000485024	WDYHV1	Q96HA8	205 aa		4.25	□□□□□ -1.73
VPS8-223	ENST00000485024	APOPT1	Q96IL0	206 aa		4.25	□□□□□ -1.73
VPS8-223	ENST00000485024	PRR25	Q96S07	402 aa		4.25	□□□□□ -1.73
VPS8-223	ENST00000485024	NUDT16L1	Q9BRJ7	211 aa	Known RBP	4.25	□□□□□ -1.73
VPS8-223	ENST00000485024	FUZ	Q9BT04	418 aa		4.25	□□□□□ -1.73
VPS8-223	ENST00000485024	HTATIP2	Q9BUP3	242 aa		4.25	□□□□□ -1.73
VPS8-223	ENST00000485024	KRT84	Q9NSB2	600 aa		4.25	□□□□□ -1.73
VPS8-223	ENST00000485024	HCN3	Q9P1Z3	774 aa		4.25	□□□□□ -1.73
VPS8-223	ENST00000485024	RAB21	Q9UL25	225 aa		4.25	□□□□□ -1.73
VPS8-223	ENST00000485024	DLC1	Q96QB1	1528 aa		4.25	□□□□□ -1.73
VPS8-223	ENST00000485024	COL16A1	Q07092	1604 aa	Predicted RBP	4.24	□□□□□ -1.73
VPS8-223	ENST00000485024	PRDM2	Q13029	1718 aa		4.24	□□□□□ -1.73
VPS8-223	ENST00000485024	WDR90	Q96KV7	1748 aa		4.24	□□□□□ -1.73
VPS8-223	ENST00000485024		A0A1W2PPH5	198 aa		4.24	□□□□□ -1.73
VPS8-223	ENST00000485024	FAM90A10P	A6NDY2	464 aa		4.24	□□□□□ -1.73
VPS8-223	ENST00000485024	PGPEP1L	A6NFU8	196 aa		4.24	□□□□□ -1.73
VPS8-223	ENST00000485024	VWC2L	B2RUY7	222 aa		4.24	□□□□□ -1.73
VPS8-223	ENST00000485024	TMEM232	C9JQI7	657 aa		4.24	□□□□□ -1.73
VPS8-223	ENST00000485024	QSOX1	O00391	747 aa		4.24	□□□□□ -1.73
VPS8-223	ENST00000485024	TCERG1	O14776	1098 aa	Known RBP	4.24	□□□□□ -1.73
VPS8-223	ENST00000485024	FIBP	O43427	364 aa		4.24	□□□□□ -1.73
VPS8-223	ENST00000485024	TIPRL	O75663	272 aa		4.24	□□□□□ -1.73
VPS8-223	ENST00000485024	URI1	O94763	535 aa	Predicted RBP	4.24	□□□□□ -1.73
VPS8-223	ENST00000485024	HEXIM1	O94992	359 aa	Known RBP	4.24	□□□□□ -1.73
VPS8-223	ENST00000485024	VNN1	O95497	513 aa		4.24	□□□□□ -1.73
VPS8-223	ENST00000485024	METTL18	O95568	372 aa		4.24	□□□□□ -1.73
VPS8-223	ENST00000485024	CSF1	P09603	554 aa		4.24	□□□□□ -1.73
VPS8-223	ENST00000485024	DRD4	P21917	467 aa		4.24	□□□□□ -1.73
VPS8-223	ENST00000485024	CCR9	P51686	369 aa		4.24	□□□□□ -1.73
VPS8-223	ENST00000485024	CLCN2	P51788	898 aa		4.24	□□□□□ -1.73
VPS8-223	ENST00000485024	JAK3	P52333	1124 aa		4.24	□□□□□ -1.73
VPS8-223	ENST00000485024	LBX1	P52954	281 aa		4.24	□□□□□ -1.73
VPS8-223	ENST00000485024	OAZ1	P54368	228 aa		4.24	□□□□□ -1.73
VPS8-223	ENST00000485024	GALNT2	Q10471	571 aa		4.24	□□□□□ -1.73
VPS8-223	ENST00000485024	ALKBH1	Q13686	389 aa	Known RBP	4.24	□□□□□ -1.73
VPS8-223	ENST00000485024	KRT32	Q14532	448 aa		4.24	□□□□□ -1.73
VPS8-223	ENST00000485024	CYP1B1	Q16678	543 aa		4.24	□□□□□ -1.73
VPS8-223	ENST00000485024	SLC9C2	Q5TAH2	1124 aa		4.24	□□□□□ -1.73
VPS8-223	ENST00000485024	GRHL2	Q6ISB3	625 aa		4.24	□□□□□ -1.73
VPS8-223	ENST00000485024	INO80C	Q6PI98	192 aa	Predicted RBP	4.24	□□□□□ -1.73
VPS8-223	ENST00000485024		Q6ZWC4	215 aa		4.24	□□□□□ -1.73
VPS8-223	ENST00000485024	TMTC3	Q6ZXV5	915 aa		4.24	□□□□□ -1.73
VPS8-223	ENST00000485024	CCDC105	Q8IYK2	499 aa		4.24	□□□□□ -1.73
VPS8-223	ENST00000485024	INTS2	Q9H0H0	1204 aa	Known RBP	4.24	□□□□□ -1.73
VPS8-223	ENST00000485024	CCDC68	Q9H2F9	335 aa		4.24	□□□□□ -1.73
VPS8-223	ENST00000485024	CDCP1	Q9H5V8	836 aa		4.24	□□□□□ -1.73
VPS8-223	ENST00000485024	SFXN1	Q9H9B4	322 aa		4.24	□□□□□ -1.73
VPS8-223	ENST00000485024	BEX4	Q9NWD9	120 aa	Predicted RBP	4.24	□□□□□ -1.73
VPS8-223	ENST00000485024	TAS2R10	Q9NYW0	307 aa		4.24	□□□□□ -1.73
VPS8-223	ENST00000485024	OSGIN2	Q9Y236	505 aa		4.24	□□□□□ -1.73
VPS8-223	ENST00000485024	ZCCHC11	Q5TAX3	1644 aa	Known RBP	4.24	□□□□□ -1.73
VPS8-223	ENST00000485024	SPATA31A1	Q5TZJ5	1347 aa		4.23	□□□□□ -1.73
VPS8-223	ENST00000485024	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	4.23	□□□□□ -1.73
VPS8-223	ENST00000485024	SHPRH	Q149N8	1683 aa		4.23	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms