RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 TBC1D31Q96DN5 1066 aa13.2□□□□□ -0.3
HDAC1-209ENST00000484305 ORAI3Q9BRQ5 295 aa13.2□□□□□ -0.3
HDAC1-209ENST00000484305 ATP13A1Q9HD20 1204 aa13.2□□□□□ -0.3
HDAC1-209ENST00000484305 PARVAQ9NVD7 372 aa13.2□□□□□ -0.3
HDAC1-209ENST00000484305 DNAI1Q9UI46 699 aa13.2□□□□□ -0.3
HDAC1-209ENST00000484305 PPM1HQ9ULR3 514 aa13.2□□□□□ -0.3
HDAC1-209ENST00000484305 FZD10Q9ULW2 581 aa13.2□□□□□ -0.3
HDAC1-209ENST00000484305 TMEM131Q92545 1883 aa13.2□□□□□ -0.3
HDAC1-209ENST00000484305 TP53BP1Q12888 1972 aaPredicted RBP13.2□□□□□ -0.3
HDAC1-209ENST00000484305 PCNX2A6NKB5 2137 aa13.19□□□□□ -0.3
HDAC1-209ENST00000484305 TMEM191CA6NGB0 347 aa13.19□□□□□ -0.3
HDAC1-209ENST00000484305 GIPC1O14908 333 aa13.19□□□□□ -0.3
HDAC1-209ENST00000484305 ALOX15BO15296 676 aa13.19□□□□□ -0.3
HDAC1-209ENST00000484305 RTN2O75298 545 aa13.19□□□□□ -0.3
HDAC1-209ENST00000484305 ZNF821O75541 412 aaPredicted RBP13.19□□□□□ -0.3
HDAC1-209ENST00000484305 CTSLP07711 333 aa13.19□□□□□ -0.3
HDAC1-209ENST00000484305 RHOQP17081 205 aa13.19□□□□□ -0.3
HDAC1-209ENST00000484305 L1CAMP32004 1257 aa13.19□□□□□ -0.3
HDAC1-209ENST00000484305 ACVRL1P37023 503 aa13.19□□□□□ -0.3
HDAC1-209ENST00000484305 MAPKAPK2P49137 400 aa13.19□□□□□ -0.3
HDAC1-209ENST00000484305 CSNK1EP49674 416 aaKnown RBP13.19□□□□□ -0.3
HDAC1-209ENST00000484305 ARF5P84085 180 aa13.19□□□□□ -0.3
HDAC1-209ENST00000484305 BNC1Q01954 994 aa13.19□□□□□ -0.3
HDAC1-209ENST00000484305 GRIK2Q13002 908 aa13.19□□□□□ -0.3
HDAC1-209ENST00000484305 POM121L1PQ3SYA9 428 aa13.19□□□□□ -0.3
HDAC1-209ENST00000484305 EFHC2Q5JST6 749 aa13.19□□□□□ -0.3
HDAC1-209ENST00000484305 KIAA0895LQ68EN5 471 aa13.19□□□□□ -0.3
HDAC1-209ENST00000484305 DSG4Q86SJ6 1040 aa13.19□□□□□ -0.3
HDAC1-209ENST00000484305 OR2A12Q8NGT7 310 aa13.19□□□□□ -0.3
HDAC1-209ENST00000484305 OR2T34Q8NGX1 318 aa13.19□□□□□ -0.3
HDAC1-209ENST00000484305 OR14C36Q8NHC7 312 aa13.19□□□□□ -0.3
HDAC1-209ENST00000484305 PIP4K2CQ8TBX8 421 aa13.19□□□□□ -0.3
HDAC1-209ENST00000484305 ACE2Q9BYF1 805 aaPredicted RBP13.19□□□□□ -0.3
HDAC1-209ENST00000484305 TRIM7Q9C029 511 aa13.19□□□□□ -0.3
HDAC1-209ENST00000484305 TNKS2Q9H2K2 1166 aa13.19□□□□□ -0.3
HDAC1-209ENST00000484305 RETREG1Q9H6L5 497 aa13.19□□□□□ -0.3
HDAC1-209ENST00000484305 EBF2Q9HAK2 575 aa13.19□□□□□ -0.3
HDAC1-209ENST00000484305 TMEM248Q9NWD8 314 aa13.19□□□□□ -0.3
HDAC1-209ENST00000484305 CNOT8Q9UFF9 292 aaKnown RBP13.19□□□□□ -0.3
HDAC1-209ENST00000484305 CAPN11Q9UMQ6 739 aa13.19□□□□□ -0.3
HDAC1-209ENST00000484305 ACTL7AQ9Y615 435 aa13.19□□□□□ -0.3
HDAC1-209ENST00000484305 LRRC72A6NJI9 287 aa13.18□□□□□ -0.3
HDAC1-209ENST00000484305 C10orf142B7Z368 130 aa13.18□□□□□ -0.3
HDAC1-209ENST00000484305 RNF103O00237 685 aa13.18□□□□□ -0.3
HDAC1-209ENST00000484305 CREB3O43889 395 aa13.18□□□□□ -0.3
HDAC1-209ENST00000484305 OPHN1O60890 802 aa13.18□□□□□ -0.3
HDAC1-209ENST00000484305 GJB3O75712 270 aa13.18□□□□□ -0.3
HDAC1-209ENST00000484305 CD160O95971 181 aa13.18□□□□□ -0.3
HDAC1-209ENST00000484305 GYPCP04921 128 aa13.18□□□□□ -0.3
HDAC1-209ENST00000484305 ADRB1P08588 477 aa13.18□□□□□ -0.3
HDAC1-209ENST00000484305 PSMA2P25787 234 aa13.18□□□□□ -0.3
HDAC1-209ENST00000484305 CD27P26842 260 aa13.18□□□□□ -0.3
HDAC1-209ENST00000484305 SERPINH1P50454 418 aaKnown RBP13.18□□□□□ -0.3
HDAC1-209ENST00000484305 NOVA1P51513 510 aaKnown RBP13.18□□□□□ -0.3
HDAC1-209ENST00000484305 CLCN6P51797 869 aa13.18□□□□□ -0.3
HDAC1-209ENST00000484305 ADPRHP54922 357 aa13.18□□□□□ -0.3
HDAC1-209ENST00000484305 ZBED6P86452 979 aa13.18□□□□□ -0.3
HDAC1-209ENST00000484305 ZNF252P-AS1Q0IIN9 211 aa13.18□□□□□ -0.3
HDAC1-209ENST00000484305 CNTN1Q12860 1018 aa13.18□□□□□ -0.3
HDAC1-209ENST00000484305 SEMA3BQ13214 749 aa13.18□□□□□ -0.3
HDAC1-209ENST00000484305 TDRD12Q587J7 1177 aaKnown RBP13.18□□□□□ -0.3
HDAC1-209ENST00000484305 N4BP2L1Q5TBK1 243 aaPredicted RBP13.18□□□□□ -0.3
HDAC1-209ENST00000484305 FAM46CQ5VWP2 391 aa13.18□□□□□ -0.3
HDAC1-209ENST00000484305 PSAPL1Q6NUJ1 521 aa13.18□□□□□ -0.3
HDAC1-209ENST00000484305 RETSATQ6NUM9 610 aa13.18□□□□□ -0.3
HDAC1-209ENST00000484305 C22orf39Q6P5X5 142 aa13.18□□□□□ -0.3
HDAC1-209ENST00000484305 ARFGAP1Q8N6T3 406 aa13.18□□□□□ -0.3
HDAC1-209ENST00000484305 CHST14Q8NCH0 376 aa13.18□□□□□ -0.3
HDAC1-209ENST00000484305 SYN2Q92777 582 aaPredicted RBP13.18□□□□□ -0.3
HDAC1-209ENST00000484305 ARHGEF2Q92974 986 aaKnown RBP13.18□□□□□ -0.3
HDAC1-209ENST00000484305 FAM131CQ96AQ9 280 aa13.18□□□□□ -0.3
HDAC1-209ENST00000484305 ZNF653Q96CK0 615 aa13.18□□□□□ -0.3
HDAC1-209ENST00000484305 XPO4Q9C0E2 1151 aaKnown RBP13.18□□□□□ -0.3
HDAC1-209ENST00000484305 ISCUQ9H1K1 167 aa13.18□□□□□ -0.3
HDAC1-209ENST00000484305 TM9SF3Q9HD45 589 aa13.18□□□□□ -0.3
HDAC1-209ENST00000484305 DNAAF2Q9NVR5 837 aaKnown RBP13.18□□□□□ -0.3
HDAC1-209ENST00000484305 GPATCH2LQ9NWQ4 482 aa13.18□□□□□ -0.3
HDAC1-209ENST00000484305 BZW2Q9Y6E2 419 aaKnown RBP13.18□□□□□ -0.3
HDAC1-209ENST00000484305 TBC1D3DA0A087WVF3 549 aa13.17□□□□□ -0.3
HDAC1-209ENST00000484305 TBC1D3IA0A087WXS9 549 aa13.17□□□□□ -0.3
HDAC1-209ENST00000484305 TBC1D3EA0A087X179 549 aa13.17□□□□□ -0.3
HDAC1-209ENST00000484305 TBC1D3KA0A087X1G2 549 aa13.17□□□□□ -0.3
HDAC1-209ENST00000484305 A0A1B0GVT2 93 aa13.17□□□□□ -0.3
HDAC1-209ENST00000484305 TBC1D3FA6NER0 549 aaPredicted RBP13.17□□□□□ -0.3
HDAC1-209ENST00000484305 TBC1D3LB9A6J9 549 aa13.17□□□□□ -0.3
HDAC1-209ENST00000484305 C1QTNF3-AMACRE9PGA6 284 aa13.17□□□□□ -0.3
HDAC1-209ENST00000484305 SERPING1P05155 500 aa13.17□□□□□ -0.3
HDAC1-209ENST00000484305 TBC1D3HP0C7X1 549 aa13.17□□□□□ -0.3
HDAC1-209ENST00000484305 CD59P13987 128 aa13.17□□□□□ -0.3
HDAC1-209ENST00000484305 DESP17661 470 aa13.17□□□□□ -0.3
HDAC1-209ENST00000484305 CSRP1P21291 193 aaKnown RBP13.17□□□□□ -0.3
HDAC1-209ENST00000484305 EPHB2P29323 1055 aa13.17□□□□□ -0.3
HDAC1-209ENST00000484305 CASP14P31944 242 aa13.17□□□□□ -0.3
HDAC1-209ENST00000484305 CHRNA3P32297 505 aa13.17□□□□□ -0.3
HDAC1-209ENST00000484305 ETFBP38117 255 aa13.17□□□□□ -0.3
HDAC1-209ENST00000484305 AFF3P51826 1226 aaKnown RBP13.17□□□□□ -0.3
HDAC1-209ENST00000484305 AIF1P55008 147 aa13.17□□□□□ -0.3
HDAC1-209ENST00000484305 SLC20A2Q08357 652 aa13.17□□□□□ -0.3
HDAC1-209ENST00000484305 POLD3Q15054 466 aaPredicted RBP13.17□□□□□ -0.3
HDAC1-209ENST00000484305 AGBL4Q5VU57 503 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms