RNA–Protein interactions for RNA: ENST00000483764.5

MRPL28-210, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,512 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-210ENST00000483764 ARHGAP12Q8IWW6 846 aa17.55■□□□□ 0.4
MRPL28-210ENST00000483764 MICALL1Q8N3F8 863 aa17.55■□□□□ 0.4
MRPL28-210ENST00000483764 CPXM2Q8N436 756 aa17.55■□□□□ 0.4
MRPL28-210ENST00000483764 CELF5Q8N6W0 485 aaKnown RBP17.55■□□□□ 0.4
MRPL28-210ENST00000483764 CCNYQ8ND76 341 aa17.55■□□□□ 0.4
MRPL28-210ENST00000483764 RIN3Q8TB24 985 aa17.55■□□□□ 0.4
MRPL28-210ENST00000483764 LRRN4Q8WUT4 740 aa17.55■□□□□ 0.4
MRPL28-210ENST00000483764 TFB1MQ8WVM0 346 aaKnown RBP17.55■□□□□ 0.4
MRPL28-210ENST00000483764 PABPC5Q96DU9 382 aaKnown RBP17.55■□□□□ 0.4
MRPL28-210ENST00000483764 TMA16Q96EY4 203 aaKnown RBP17.55■□□□□ 0.4
MRPL28-210ENST00000483764 SGSM3Q96HU1 749 aa17.55■□□□□ 0.4
MRPL28-210ENST00000483764 CABS1Q96KC9 395 aa17.55■□□□□ 0.4
MRPL28-210ENST00000483764 RIPOR3Q96MK2 946 aa17.55■□□□□ 0.4
MRPL28-210ENST00000483764 ZNF317Q96PQ6 595 aaPredicted RBP17.55■□□□□ 0.4
MRPL28-210ENST00000483764 QKIQ96PU8 341 aaKnown RBP eCLIP17.55■□□□□ 0.4
MRPL28-210ENST00000483764 LGMNQ99538 433 aa17.55■□□□□ 0.4
MRPL28-210ENST00000483764 BRD8Q9H0E9 1235 aa17.55■□□□□ 0.4
MRPL28-210ENST00000483764 KIF9Q9HAQ2 790 aa17.55■□□□□ 0.4
MRPL28-210ENST00000483764 USP29Q9HBJ7 922 aa17.55■□□□□ 0.4
MRPL28-210ENST00000483764 SAMD15Q9P1V8 674 aa17.55■□□□□ 0.4
MRPL28-210ENST00000483764 CLDN11O75508 207 aa17.54■□□□□ 0.4
MRPL28-210ENST00000483764 RBL1P28749 1068 aa17.54■□□□□ 0.4
MRPL28-210ENST00000483764 OR1E1P30953 314 aa17.54■□□□□ 0.4
MRPL28-210ENST00000483764 MAPKAPK2P49137 400 aa17.54■□□□□ 0.4
MRPL28-210ENST00000483764 SGSHP51688 502 aa17.54■□□□□ 0.4
MRPL28-210ENST00000483764 NDST2P52849 883 aa17.54■□□□□ 0.4
MRPL28-210ENST00000483764 ARL4CP56559 192 aa17.54■□□□□ 0.4
MRPL28-210ENST00000483764 GPS1Q13098 491 aa17.54■□□□□ 0.4
MRPL28-210ENST00000483764 KYNUQ16719 465 aa17.54■□□□□ 0.4
MRPL28-210ENST00000483764 FAM78AQ5JUQ0 283 aa17.54■□□□□ 0.4
MRPL28-210ENST00000483764 EXOC3L1Q86VI1 746 aa17.54■□□□□ 0.4
MRPL28-210ENST00000483764 FAM71DQ8N9W8 422 aa17.54■□□□□ 0.4
MRPL28-210ENST00000483764 CCDC197Q8NCU1 140 aa17.54■□□□□ 0.4
MRPL28-210ENST00000483764 SMARCD2Q92925 531 aa17.54■□□□□ 0.4
MRPL28-210ENST00000483764 SEC16BQ96JE7 1060 aa17.54■□□□□ 0.4
MRPL28-210ENST00000483764 SLC39A8Q9C0K1 460 aa17.54■□□□□ 0.4
MRPL28-210ENST00000483764 A0A1B0GVM2 712 aa17.53■□□□□ 0.4
MRPL28-210ENST00000483764 TCAF2A6NFQ2 919 aa17.53■□□□□ 0.4
MRPL28-210ENST00000483764 SPAG6O75602 509 aa17.53■□□□□ 0.4
MRPL28-210ENST00000483764 IFNB1P01574 187 aa17.53■□□□□ 0.4
MRPL28-210ENST00000483764 GARSP41250 739 aaKnown RBP17.53■□□□□ 0.4
MRPL28-210ENST00000483764 GDF10P55107 478 aa17.53■□□□□ 0.4
MRPL28-210ENST00000483764 IFI35P80217 286 aaPredicted RBP17.53■□□□□ 0.4
MRPL28-210ENST00000483764 AP1B1Q10567 949 aa17.53■□□□□ 0.4
MRPL28-210ENST00000483764 USP4Q13107 963 aa17.53■□□□□ 0.4
MRPL28-210ENST00000483764 PRKD1Q15139 912 aaPredicted RBP17.53■□□□□ 0.4
MRPL28-210ENST00000483764 TRIP13Q15645 432 aaPredicted RBP17.53■□□□□ 0.4
MRPL28-210ENST00000483764 CHST9Q7L1S5 443 aa17.53■□□□□ 0.4
MRPL28-210ENST00000483764 TDRD5Q8NAT2 981 aaKnown RBP17.53■□□□□ 0.4
MRPL28-210ENST00000483764 HJURPQ8NCD3 748 aaPredicted RBP17.53■□□□□ 0.4
MRPL28-210ENST00000483764 MSLNLQ96KJ4 702 aa17.53■□□□□ 0.4
MRPL28-210ENST00000483764 ASB16Q96NS5 453 aa17.53■□□□□ 0.4
MRPL28-210ENST00000483764 KDM4CQ9H3R0 1056 aa17.53■□□□□ 0.4
MRPL28-210ENST00000483764 NOL6Q9H6R4 1146 aaKnown RBP17.53■□□□□ 0.4
MRPL28-210ENST00000483764 SSU72Q9NP77 194 aaKnown RBP17.53■□□□□ 0.4
MRPL28-210ENST00000483764 NKIRAS1Q9NYS0 192 aa17.53■□□□□ 0.4
MRPL28-210ENST00000483764 TBC1D14Q9P2M4 693 aa17.53■□□□□ 0.4
MRPL28-210ENST00000483764 CDH7Q9ULB5 785 aa17.53■□□□□ 0.4
MRPL28-210ENST00000483764 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.52■□□□□ 0.4
MRPL28-210ENST00000483764 TYW5A2RUC4 315 aaKnown RBP17.52■□□□□ 0.4
MRPL28-210ENST00000483764 DFFAO00273 331 aa17.52■□□□□ 0.4
MRPL28-210ENST00000483764 KCNN4O15554 427 aa17.52■□□□□ 0.4
MRPL28-210ENST00000483764 TBL1XO60907 577 aa17.52■□□□□ 0.4
MRPL28-210ENST00000483764 MTHFRP42898 656 aa17.52■□□□□ 0.4
MRPL28-210ENST00000483764 PPIDQ08752 370 aaKnown RBP17.52■□□□□ 0.4
MRPL28-210ENST00000483764 ZNF177Q13360 481 aaPredicted RBP17.52■□□□□ 0.4
MRPL28-210ENST00000483764 MPPE1Q53F39 396 aa17.52■□□□□ 0.4
MRPL28-210ENST00000483764 HEATR6Q6AI08 1181 aaKnown RBP17.52■□□□□ 0.4
MRPL28-210ENST00000483764 PRUNE1Q86TP1 453 aa17.52■□□□□ 0.4
MRPL28-210ENST00000483764 LRRC49Q8IUZ0 686 aa17.52■□□□□ 0.4
MRPL28-210ENST00000483764 C10orf67Q8IYJ2 551 aa17.52■□□□□ 0.4
MRPL28-210ENST00000483764 GLIS1Q8NBF1 620 aa17.52■□□□□ 0.4
MRPL28-210ENST00000483764 HTR3CQ8WXA8 447 aa17.52■□□□□ 0.4
MRPL28-210ENST00000483764 GRAMD1AQ96CP6 724 aa17.52■□□□□ 0.4
MRPL28-210ENST00000483764 HDAC11Q96DB2 347 aa17.52■□□□□ 0.4
MRPL28-210ENST00000483764 FERMT1Q9BQL6 677 aa17.52■□□□□ 0.4
MRPL28-210ENST00000483764 SMG5Q9UPR3 1016 aaKnown RBP17.52■□□□□ 0.4
MRPL28-210ENST00000483764 FARP1Q9Y4F1 1045 aaPredicted RBP17.52■□□□□ 0.4
MRPL28-210ENST00000483764 SMIM23A6NLE4 172 aa17.52■□□□□ 0.39
MRPL28-210ENST00000483764 RASA4BC9J798 803 aa17.52■□□□□ 0.39
MRPL28-210ENST00000483764 RASA4O43374 803 aa17.52■□□□□ 0.39
MRPL28-210ENST00000483764 RAMP2O60895 175 aa17.52■□□□□ 0.39
MRPL28-210ENST00000483764 ZSCAN5DPP0CG00 497 aa17.52■□□□□ 0.39
MRPL28-210ENST00000483764 ETS1P14921 441 aa17.52■□□□□ 0.39
MRPL28-210ENST00000483764 VIPR2P41587 438 aa17.52■□□□□ 0.39
MRPL28-210ENST00000483764 VPS41P49754 854 aa17.52■□□□□ 0.39
MRPL28-210ENST00000483764 PAPOLAP51003 745 aaKnown RBP17.52■□□□□ 0.39
MRPL28-210ENST00000483764 YBEYP58557 167 aaPredicted RBP17.52■□□□□ 0.39
MRPL28-210ENST00000483764 ZNF33AQ06730 810 aa17.52■□□□□ 0.39
MRPL28-210ENST00000483764 HIF1AQ16665 826 aa17.52■□□□□ 0.39
MRPL28-210ENST00000483764 LONRF1Q17RB8 773 aa17.52■□□□□ 0.39
MRPL28-210ENST00000483764 SKIDA1Q1XH10 827 aa17.52■□□□□ 0.39
MRPL28-210ENST00000483764 KLHL38Q2WGJ6 581 aa17.52■□□□□ 0.39
MRPL28-210ENST00000483764 LACTB2Q53H82 288 aaPredicted RBP17.52■□□□□ 0.39
MRPL28-210ENST00000483764 MPP7Q5T2T1 576 aa17.52■□□□□ 0.39
MRPL28-210ENST00000483764 KIAA1958Q8N8K9 716 aa17.52■□□□□ 0.39
MRPL28-210ENST00000483764 ATP11CQ8NB49 1132 aa17.52■□□□□ 0.39
MRPL28-210ENST00000483764 DDI1Q8WTU0 396 aa17.52■□□□□ 0.39
MRPL28-210ENST00000483764 DYDC1Q8WWB3 177 aa17.52■□□□□ 0.39
MRPL28-210ENST00000483764 OTUB2Q96DC9 234 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms