RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 HOXB2P14652 356 aa18.21■□□□□ 0.5
CPNE1-224ENST00000483359 B4GALNT4Q76KP1 1039 aa18.21■□□□□ 0.5
CPNE1-224ENST00000483359 TRMT11Q7Z4G4 463 aaKnown RBP18.21■□□□□ 0.5
CPNE1-224ENST00000483359 BMP8AQ7Z5Y6 402 aa18.21■□□□□ 0.5
CPNE1-224ENST00000483359 FAM118BQ9BPY3 351 aa18.21■□□□□ 0.5
CPNE1-224ENST00000483359 SPATA6Q9NWH7 488 aaPredicted RBP18.21■□□□□ 0.5
CPNE1-224ENST00000483359 IPO11Q9UI26 975 aaKnown RBP18.21■□□□□ 0.5
CPNE1-224ENST00000483359 FCF1Q9Y324 198 aaKnown RBP18.21■□□□□ 0.5
CPNE1-224ENST00000483359 SMAD6O43541 496 aaKnown RBP18.2■□□□□ 0.5
CPNE1-224ENST00000483359 SRPRAP08240 638 aaKnown RBP18.2■□□□□ 0.5
CPNE1-224ENST00000483359 SRCP12931 536 aa18.2■□□□□ 0.5
CPNE1-224ENST00000483359 VAV1P15498 845 aa18.2■□□□□ 0.5
CPNE1-224ENST00000483359 ZFXP17010 805 aaPredicted RBP18.2■□□□□ 0.5
CPNE1-224ENST00000483359 NNMTP40261 264 aa18.2■□□□□ 0.5
CPNE1-224ENST00000483359 TMEM31Q5JXX7 168 aa18.2■□□□□ 0.5
CPNE1-224ENST00000483359 SDE2Q6IQ49 451 aa18.2■□□□□ 0.5
CPNE1-224ENST00000483359 SH2D3CQ8N5H7 860 aa18.2■□□□□ 0.5
CPNE1-224ENST00000483359 CARD9Q9H257 536 aa18.2■□□□□ 0.5
CPNE1-224ENST00000483359 MMP17Q9ULZ9 603 aa18.2■□□□□ 0.5
CPNE1-224ENST00000483359 CD160O95971 181 aa18.19■□□□□ 0.5
CPNE1-224ENST00000483359 GARSP41250 739 aaKnown RBP18.19■□□□□ 0.5
CPNE1-224ENST00000483359 SERPINH1P50454 418 aaKnown RBP18.19■□□□□ 0.5
CPNE1-224ENST00000483359 GALNT2Q10471 571 aa18.19■□□□□ 0.5
CPNE1-224ENST00000483359 BBS12Q6ZW61 710 aa18.19■□□□□ 0.5
CPNE1-224ENST00000483359 ADAT2Q7Z6V5 191 aaKnown RBP18.19■□□□□ 0.5
CPNE1-224ENST00000483359 CACUL1Q86Y37 369 aa18.19■□□□□ 0.5
CPNE1-224ENST00000483359 CCNYQ8ND76 341 aa18.19■□□□□ 0.5
CPNE1-224ENST00000483359 KCNV2Q8TDN2 545 aa18.19■□□□□ 0.5
CPNE1-224ENST00000483359 P3H4Q92791 437 aa18.19■□□□□ 0.5
CPNE1-224ENST00000483359 TMEM245Q9H330 911 aa18.19■□□□□ 0.5
CPNE1-224ENST00000483359 HS3ST2Q9Y278 367 aa18.19■□□□□ 0.5
CPNE1-224ENST00000483359 SHROOM3Q8TF72 1996 aa18.19■□□□□ 0.5
CPNE1-224ENST00000483359 WDFY4Q6ZS81 3184 aa18.19■□□□□ 0.5
CPNE1-224ENST00000483359 TCRBV7S2A1N4TA0A589 114 aa18.19■□□□□ 0.5
CPNE1-224ENST00000483359 PRR33A8MZF0 331 aa18.19■□□□□ 0.5
CPNE1-224ENST00000483359 PRAMEF11O60813 436 aa18.19■□□□□ 0.5
CPNE1-224ENST00000483359 GPR37L1O60883 481 aa18.19■□□□□ 0.5
CPNE1-224ENST00000483359 ATG13O75143 517 aa18.19■□□□□ 0.5
CPNE1-224ENST00000483359 COL9A1P20849 921 aa18.19■□□□□ 0.5
CPNE1-224ENST00000483359 TGM2P21980 687 aa18.19■□□□□ 0.5
CPNE1-224ENST00000483359 PTPN7P35236 360 aa18.19■□□□□ 0.5
CPNE1-224ENST00000483359 SATB1Q01826 763 aa18.19■□□□□ 0.5
CPNE1-224ENST00000483359 EOGTQ5NDL2 527 aa18.19■□□□□ 0.5
CPNE1-224ENST00000483359 FAM182AQ5T1J6 154 aa18.19■□□□□ 0.5
CPNE1-224ENST00000483359 KIAA1211LQ6NV74 962 aa18.19■□□□□ 0.5
CPNE1-224ENST00000483359 TMEM92Q6UXU6 159 aa18.19■□□□□ 0.5
CPNE1-224ENST00000483359 SPEM1Q8N4L4 309 aa18.19■□□□□ 0.5
CPNE1-224ENST00000483359 C16orf45Q96MC5 204 aaPredicted RBP18.19■□□□□ 0.5
CPNE1-224ENST00000483359 LGMNQ99538 433 aa18.19■□□□□ 0.5
CPNE1-224ENST00000483359 TNKS2Q9H2K2 1166 aa18.19■□□□□ 0.5
CPNE1-224ENST00000483359 PDFQ9HBH1 243 aa18.19■□□□□ 0.5
CPNE1-224ENST00000483359 CHURC1-FNTBB4DL54 471 aa18.18■□□□□ 0.5
CPNE1-224ENST00000483359 FANCGO15287 622 aa18.18■□□□□ 0.5
CPNE1-224ENST00000483359 MAFKO60675 156 aa18.18■□□□□ 0.5
CPNE1-224ENST00000483359 TJP3O95049 919 aa18.18■□□□□ 0.5
CPNE1-224ENST00000483359 AVPR2P30518 371 aa18.18■□□□□ 0.5
CPNE1-224ENST00000483359 DLG2Q15700 870 aa18.18■□□□□ 0.5
CPNE1-224ENST00000483359 Q6ZVU0 165 aa18.18■□□□□ 0.5
CPNE1-224ENST00000483359 ZC3H18Q86VM9 953 aaKnown RBP18.18■□□□□ 0.5
CPNE1-224ENST00000483359 HHIPQ96QV1 700 aa18.18■□□□□ 0.5
CPNE1-224ENST00000483359 GABRG3Q99928 467 aa18.18■□□□□ 0.5
CPNE1-224ENST00000483359 C1QTNF1Q9BXJ1 281 aa18.18■□□□□ 0.5
CPNE1-224ENST00000483359 TM6SF2Q9BZW4 377 aa18.18■□□□□ 0.5
CPNE1-224ENST00000483359 UBA2Q9UBT2 640 aaPredicted RBP18.18■□□□□ 0.5
CPNE1-224ENST00000483359 APOC4-APOC2K7ER74 178 aa18.17■□□□□ 0.5
CPNE1-224ENST00000483359 NPC1O15118 1278 aa18.17■□□□□ 0.5
CPNE1-224ENST00000483359 CEP104O60308 925 aa18.17■□□□□ 0.5
CPNE1-224ENST00000483359 SYNCRIPO60506 623 aaKnown RBP18.17■□□□□ 0.5
CPNE1-224ENST00000483359 TMCC1O94876 653 aa18.17■□□□□ 0.5
CPNE1-224ENST00000483359 APOC2P02655 101 aa18.17■□□□□ 0.5
CPNE1-224ENST00000483359 IL10RBQ08334 325 aa18.17■□□□□ 0.5
CPNE1-224ENST00000483359 ENPP2Q13822 863 aa18.17■□□□□ 0.5
CPNE1-224ENST00000483359 CRY1Q16526 586 aa18.17■□□□□ 0.5
CPNE1-224ENST00000483359 C22orf39Q6P5X5 142 aa18.17■□□□□ 0.5
CPNE1-224ENST00000483359 SYT13Q7L8C5 426 aa18.17■□□□□ 0.5
CPNE1-224ENST00000483359 EXOC2Q96KP1 924 aa18.17■□□□□ 0.5
CPNE1-224ENST00000483359 OLFM3Q96PB7 478 aa18.17■□□□□ 0.5
CPNE1-224ENST00000483359 KMT2EQ8IZD2 1858 aa18.17■□□□□ 0.5
CPNE1-224ENST00000483359 A0A1W2PQF6 199 aa18.17■□□□□ 0.5
CPNE1-224ENST00000483359 ZSCAN5CA6NGD5 496 aaPredicted RBP18.17■□□□□ 0.5
CPNE1-224ENST00000483359 MX2P20592 715 aa18.17■□□□□ 0.5
CPNE1-224ENST00000483359 MAGEA9P43362 315 aa18.17■□□□□ 0.5
CPNE1-224ENST00000483359 GEMIN4P57678 1058 aaKnown RBP18.17■□□□□ 0.5
CPNE1-224ENST00000483359 OTUD4Q01804 1114 aaKnown RBP18.17■□□□□ 0.5
CPNE1-224ENST00000483359 AP1B1Q10567 949 aa18.17■□□□□ 0.5
CPNE1-224ENST00000483359 STARD3Q14849 445 aa18.17■□□□□ 0.5
CPNE1-224ENST00000483359 HNRNPA1L2Q32P51 320 aaKnown RBP18.17■□□□□ 0.5
CPNE1-224ENST00000483359 HSF5Q4G112 596 aaPredicted RBP18.17■□□□□ 0.5
CPNE1-224ENST00000483359 ACTL9Q8TC94 416 aa18.17■□□□□ 0.5
CPNE1-224ENST00000483359 UBE2Q2Q8WVN8 375 aa18.17■□□□□ 0.5
CPNE1-224ENST00000483359 PRDM16Q9HAZ2 1276 aa18.17■□□□□ 0.5
CPNE1-224ENST00000483359 SLC8A2Q9UPR5 921 aa18.17■□□□□ 0.5
CPNE1-224ENST00000483359 EFR3BQ9Y2G0 817 aa18.17■□□□□ 0.5
CPNE1-224ENST00000483359 TCRBV21S2A2A0A5A6 115 aa18.16■□□□□ 0.5
CPNE1-224ENST00000483359 ATP9BO43861 1147 aa18.16■□□□□ 0.5
CPNE1-224ENST00000483359 SIN3BO75182 1162 aa18.16■□□□□ 0.5
CPNE1-224ENST00000483359 KLF1Q13351 362 aaPredicted RBP18.16■□□□□ 0.5
CPNE1-224ENST00000483359 E2F5Q15329 346 aa18.16■□□□□ 0.5
CPNE1-224ENST00000483359 TSSK4Q6SA08 328 aa18.16■□□□□ 0.5
CPNE1-224ENST00000483359 SLC13A5Q86YT5 568 aaPredicted RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms