RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 LONRF2Q1L5Z9 754 aa13.51□□□□□ -0.25
HDAC1-208ENST00000482310 AFMIDQ63HM1 303 aa13.51□□□□□ -0.25
HDAC1-208ENST00000482310 SERPINA13PQ6UXR4 307 aa13.51□□□□□ -0.25
HDAC1-208ENST00000482310 NYAP1Q6ZVC0 841 aa13.51□□□□□ -0.25
HDAC1-208ENST00000482310 BBS12Q6ZW61 710 aa13.51□□□□□ -0.25
HDAC1-208ENST00000482310 VSIG1Q86XK7 387 aa13.51□□□□□ -0.25
HDAC1-208ENST00000482310 CACUL1Q86Y37 369 aa13.51□□□□□ -0.25
HDAC1-208ENST00000482310 CHPFQ8IZ52 775 aa13.51□□□□□ -0.25
HDAC1-208ENST00000482310 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.51□□□□□ -0.25
HDAC1-208ENST00000482310 TXNDC5Q8NBS9 432 aaKnown RBP13.51□□□□□ -0.25
HDAC1-208ENST00000482310 ATG4AQ8WYN0 398 aa13.51□□□□□ -0.25
HDAC1-208ENST00000482310 LGMNQ99538 433 aa13.51□□□□□ -0.25
HDAC1-208ENST00000482310 CEP41Q9BYV8 373 aa13.51□□□□□ -0.25
HDAC1-208ENST00000482310 RETREG1Q9H6L5 497 aa13.51□□□□□ -0.25
HDAC1-208ENST00000482310 C10orf88Q9H8K7 445 aa13.51□□□□□ -0.25
HDAC1-208ENST00000482310 SLCO3A1Q9UIG8 710 aa13.51□□□□□ -0.25
HDAC1-208ENST00000482310 PLA2G4CQ9UP65 541 aa13.51□□□□□ -0.25
HDAC1-208ENST00000482310 R3HDM2Q9Y2K5 976 aaKnown RBP13.51□□□□□ -0.25
HDAC1-208ENST00000482310 FCF1Q9Y324 198 aaKnown RBP13.51□□□□□ -0.25
HDAC1-208ENST00000482310 SIT1Q9Y3P8 196 aa13.51□□□□□ -0.25
HDAC1-208ENST00000482310 TTC34A8MYJ7 566 aa13.5□□□□□ -0.25
HDAC1-208ENST00000482310 H7C0C1 242 aa13.5□□□□□ -0.25
HDAC1-208ENST00000482310 SMAD6O43541 496 aaKnown RBP13.5□□□□□ -0.25
HDAC1-208ENST00000482310 KDELR3O43731 214 aa13.5□□□□□ -0.25
HDAC1-208ENST00000482310 ASLP04424 464 aa13.5□□□□□ -0.25
HDAC1-208ENST00000482310 VAV1P15498 845 aa13.5□□□□□ -0.25
HDAC1-208ENST00000482310 PTPN7P35236 360 aa13.5□□□□□ -0.25
HDAC1-208ENST00000482310 GARSP41250 739 aaKnown RBP13.5□□□□□ -0.25
HDAC1-208ENST00000482310 IL12RB1P42701 662 aa13.5□□□□□ -0.25
HDAC1-208ENST00000482310 KIR2DL1P43626 348 aaPredicted RBP13.5□□□□□ -0.25
HDAC1-208ENST00000482310 ATP5OP48047 213 aa13.5□□□□□ -0.25
HDAC1-208ENST00000482310 PLK1P53350 603 aa13.5□□□□□ -0.25
HDAC1-208ENST00000482310 GALNT2Q10471 571 aa13.5□□□□□ -0.25
HDAC1-208ENST00000482310 EIF4HQ15056 248 aaKnown RBP13.5□□□□□ -0.25
HDAC1-208ENST00000482310 DGKKQ5KSL6 1271 aa13.5□□□□□ -0.25
HDAC1-208ENST00000482310 SLC13A5Q86YT5 568 aaPredicted RBP13.5□□□□□ -0.25
HDAC1-208ENST00000482310 ACTL9Q8TC94 416 aa13.5□□□□□ -0.25
HDAC1-208ENST00000482310 TTC17Q96AE7 1141 aa13.5□□□□□ -0.25
HDAC1-208ENST00000482310 PBXIP1Q96AQ6 731 aa13.5□□□□□ -0.25
HDAC1-208ENST00000482310 EXOC2Q96KP1 924 aa13.5□□□□□ -0.25
HDAC1-208ENST00000482310 MRGPRX3Q96LB0 322 aa13.5□□□□□ -0.25
HDAC1-208ENST00000482310 PHOX2BQ99453 314 aa13.5□□□□□ -0.25
HDAC1-208ENST00000482310 ACE2Q9BYF1 805 aaPredicted RBP13.5□□□□□ -0.25
HDAC1-208ENST00000482310 TNKS2Q9H2K2 1166 aa13.5□□□□□ -0.25
HDAC1-208ENST00000482310 UBA2Q9UBT2 640 aaPredicted RBP13.5□□□□□ -0.25
HDAC1-208ENST00000482310 IPO11Q9UI26 975 aaKnown RBP13.5□□□□□ -0.25
HDAC1-208ENST00000482310 TTLL3Q9Y4R7 772 aa13.5□□□□□ -0.25
HDAC1-208ENST00000482310 APOC4-APOC2K7ER74 178 aa13.49□□□□□ -0.25
HDAC1-208ENST00000482310 PPP1R12AO14974 1030 aaPredicted RBP13.49□□□□□ -0.25
HDAC1-208ENST00000482310 NCAM2O15394 837 aa13.49□□□□□ -0.25
HDAC1-208ENST00000482310 PRAMEF11O60813 436 aa13.49□□□□□ -0.25
HDAC1-208ENST00000482310 ZMPSTE24O75844 475 aa13.49□□□□□ -0.25
HDAC1-208ENST00000482310 NEBLO76041 1014 aa13.49□□□□□ -0.25
HDAC1-208ENST00000482310 TMCC1O94876 653 aa13.49□□□□□ -0.25
HDAC1-208ENST00000482310 APOC2P02655 101 aa13.49□□□□□ -0.25
HDAC1-208ENST00000482310 EPHX1P07099 455 aa13.49□□□□□ -0.25
HDAC1-208ENST00000482310 SRCP12931 536 aa13.49□□□□□ -0.25
HDAC1-208ENST00000482310 NNMTP40261 264 aa13.49□□□□□ -0.25
HDAC1-208ENST00000482310 SERPINH1P50454 418 aaKnown RBP13.49□□□□□ -0.25
HDAC1-208ENST00000482310 EIF3EP60228 445 aaKnown RBP13.49□□□□□ -0.25
HDAC1-208ENST00000482310 SULT2A1Q06520 285 aa13.49□□□□□ -0.25
HDAC1-208ENST00000482310 FZD5Q13467 585 aa13.49□□□□□ -0.25
HDAC1-208ENST00000482310 SNX1Q13596 522 aa13.49□□□□□ -0.25
HDAC1-208ENST00000482310 PDK1Q15118 436 aa13.49□□□□□ -0.25
HDAC1-208ENST00000482310 NOMO1Q15155 1222 aa13.49□□□□□ -0.25
HDAC1-208ENST00000482310 KCTD19Q17RG1 926 aaPredicted RBP13.49□□□□□ -0.25
HDAC1-208ENST00000482310 FBXO43Q4G163 708 aa13.49□□□□□ -0.25
HDAC1-208ENST00000482310 RETSATQ6NUM9 610 aa13.49□□□□□ -0.25
HDAC1-208ENST00000482310 Q6ZVU0 165 aa13.49□□□□□ -0.25
HDAC1-208ENST00000482310 ZNF687Q8N1G0 1237 aa13.49□□□□□ -0.25
HDAC1-208ENST00000482310 RYBPQ8N488 228 aaPredicted RBP13.49□□□□□ -0.25
HDAC1-208ENST00000482310 IL17RCQ8NAC3 791 aa13.49□□□□□ -0.25
HDAC1-208ENST00000482310 C1orf54Q8WWF1 131 aa13.49□□□□□ -0.25
HDAC1-208ENST00000482310 ACDQ96AP0 544 aa13.49□□□□□ -0.25
HDAC1-208ENST00000482310 PBKQ96KB5 322 aa13.49□□□□□ -0.25
HDAC1-208ENST00000482310 TM6SF2Q9BZW4 377 aa13.49□□□□□ -0.25
HDAC1-208ENST00000482310 C2orf42Q9NWW7 574 aa13.49□□□□□ -0.25
HDAC1-208ENST00000482310 THAP10Q9P2Z0 257 aaPredicted RBP13.49□□□□□ -0.25
HDAC1-208ENST00000482310 SAR1BQ9Y6B6 198 aa13.49□□□□□ -0.25
HDAC1-208ENST00000482310 STON1Q9Y6Q2 735 aa13.49□□□□□ -0.25
HDAC1-208ENST00000482310 CEP192Q8TEP8 1941 aa13.49□□□□□ -0.25
HDAC1-208ENST00000482310 A0A0A0MRY4 1105 aa13.48□□□□□ -0.25
HDAC1-208ENST00000482310 F5H423 210 aaPredicted RBP13.48□□□□□ -0.25
HDAC1-208ENST00000482310 SGK1O00141 431 aa13.48□□□□□ -0.25
HDAC1-208ENST00000482310 KCNK1O00180 336 aa13.48□□□□□ -0.25
HDAC1-208ENST00000482310 MCF2LO15068 1137 aa13.48□□□□□ -0.25
HDAC1-208ENST00000482310 TIMM44O43615 452 aa13.48□□□□□ -0.25
HDAC1-208ENST00000482310 MAFKO60675 156 aa13.48□□□□□ -0.25
HDAC1-208ENST00000482310 SRPRAP08240 638 aaKnown RBP13.48□□□□□ -0.25
HDAC1-208ENST00000482310 HOXB2P14652 356 aa13.48□□□□□ -0.25
HDAC1-208ENST00000482310 MX2P20592 715 aa13.48□□□□□ -0.25
HDAC1-208ENST00000482310 KLF1Q13351 362 aaPredicted RBP13.48□□□□□ -0.25
HDAC1-208ENST00000482310 GAS6Q14393 721 aa13.48□□□□□ -0.25
HDAC1-208ENST00000482310 DLG2Q15700 870 aa13.48□□□□□ -0.25
HDAC1-208ENST00000482310 ATXN7L2Q5T6C5 722 aaPredicted RBP13.48□□□□□ -0.25
HDAC1-208ENST00000482310 SDE2Q6IQ49 451 aa13.48□□□□□ -0.25
HDAC1-208ENST00000482310 C22orf39Q6P5X5 142 aa13.48□□□□□ -0.25
HDAC1-208ENST00000482310 DARS2Q6PI48 645 aaKnown RBP13.48□□□□□ -0.25
HDAC1-208ENST00000482310 CCDC13Q8IYE1 715 aa13.48□□□□□ -0.25
HDAC1-208ENST00000482310 SH2D3CQ8N5H7 860 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms