RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 MAPKAPK2P49137 400 aa20.35■□□□□ 0.85
MSH5-215ENST00000482280 CCT8P50990 548 aa20.35■□□□□ 0.85
MSH5-215ENST00000482280 DNA2P51530 1060 aa20.35■□□□□ 0.85
MSH5-215ENST00000482280 NRG1Q02297 640 aaPredicted RBP20.35■□□□□ 0.85
MSH5-215ENST00000482280 TRIP6Q15654 476 aaKnown RBP20.35■□□□□ 0.85
MSH5-215ENST00000482280 SFMBT2Q5VUG0 894 aa20.35■□□□□ 0.85
MSH5-215ENST00000482280 WDR59Q6PJI9 974 aa20.35■□□□□ 0.85
MSH5-215ENST00000482280 MON1BQ7L1V2 547 aa20.35■□□□□ 0.85
MSH5-215ENST00000482280 OR7D4Q8NG98 312 aa20.35■□□□□ 0.85
MSH5-215ENST00000482280 SERAC1Q96JX3 654 aa20.35■□□□□ 0.85
MSH5-215ENST00000482280 PSMB7Q99436 277 aa20.35■□□□□ 0.85
MSH5-215ENST00000482280 PPM1HQ9ULR3 514 aa20.35■□□□□ 0.85
MSH5-215ENST00000482280 SNX11Q9Y5W9 270 aa20.35■□□□□ 0.85
MSH5-215ENST00000482280 PCDH15Q96QU1 1955 aa20.35■□□□□ 0.85
MSH5-215ENST00000482280 PI4KAP42356 2102 aa20.35■□□□□ 0.85
MSH5-215ENST00000482280 GOLGA6L19H0YKK7 550 aa20.34■□□□□ 0.85
MSH5-215ENST00000482280 VILLO15195 856 aa20.34■□□□□ 0.85
MSH5-215ENST00000482280 FLRT2O43155 660 aa20.34■□□□□ 0.85
MSH5-215ENST00000482280 RTN2O75298 545 aa20.34■□□□□ 0.85
MSH5-215ENST00000482280 GJB3O75712 270 aa20.34■□□□□ 0.85
MSH5-215ENST00000482280 MT-CO1P00395 513 aa20.34■□□□□ 0.85
MSH5-215ENST00000482280 PLEKP08567 350 aaPredicted RBP20.34■□□□□ 0.85
MSH5-215ENST00000482280 CD38P28907 300 aa20.34■□□□□ 0.85
MSH5-215ENST00000482280 ZNF143P52747 638 aaPredicted RBP20.34■□□□□ 0.85
MSH5-215ENST00000482280 PTP4A2Q12974 167 aa20.34■□□□□ 0.85
MSH5-215ENST00000482280 ZNF423Q2M1K9 1284 aa20.34■□□□□ 0.85
MSH5-215ENST00000482280 C22orf39Q6P5X5 142 aa20.34■□□□□ 0.85
MSH5-215ENST00000482280 NTAN1Q96AB6 310 aa20.34■□□□□ 0.85
MSH5-215ENST00000482280 SLC6A18Q96N87 628 aa20.34■□□□□ 0.85
MSH5-215ENST00000482280 CEP44Q9C0F1 390 aa20.34■□□□□ 0.85
MSH5-215ENST00000482280 IL21RQ9HBE5 538 aa20.34■□□□□ 0.85
MSH5-215ENST00000482280 IL36AQ9UHA7 158 aa20.34■□□□□ 0.85
MSH5-215ENST00000482280 FNDC3AQ9Y2H6 1198 aaKnown RBP20.34■□□□□ 0.85
MSH5-215ENST00000482280 PCDHGB2Q9Y5G2 931 aa20.34■□□□□ 0.85
MSH5-215ENST00000482280 ADAMTS9Q9P2N4 1935 aa20.33■□□□□ 0.85
MSH5-215ENST00000482280 A0A1W2PQC6 194 aa20.33■□□□□ 0.85
MSH5-215ENST00000482280 LRRC53A6NM62 1247 aa20.33■□□□□ 0.85
MSH5-215ENST00000482280 TMCO5BA8MYB1 307 aa20.33■□□□□ 0.85
MSH5-215ENST00000482280 K7ERQ8 282 aa20.33■□□□□ 0.85
MSH5-215ENST00000482280 PLRG1O43660 514 aaKnown RBP20.33■□□□□ 0.85
MSH5-215ENST00000482280 MAGEC1O60732 1142 aa20.33■□□□□ 0.85
MSH5-215ENST00000482280 RAMP2O60895 175 aa20.33■□□□□ 0.85
MSH5-215ENST00000482280 DRD3P35462 400 aa20.33■□□□□ 0.85
MSH5-215ENST00000482280 SERPINH1P50454 418 aaKnown RBP20.33■□□□□ 0.85
MSH5-215ENST00000482280 AIF1P55008 147 aa20.33■□□□□ 0.85
MSH5-215ENST00000482280 HDAC4P56524 1084 aa20.33■□□□□ 0.85
MSH5-215ENST00000482280 CNTN1Q12860 1018 aa20.33■□□□□ 0.85
MSH5-215ENST00000482280 KLHL40Q2TBA0 621 aa20.33■□□□□ 0.85
MSH5-215ENST00000482280 LAYNQ6UX15 382 aa20.33■□□□□ 0.85
MSH5-215ENST00000482280 RYBPQ8N488 228 aaPredicted RBP20.33■□□□□ 0.85
MSH5-215ENST00000482280 PCDH20Q8N6Y1 951 aaKnown RBP20.33■□□□□ 0.85
MSH5-215ENST00000482280 TMIEQ8NEW7 156 aa20.33■□□□□ 0.85
MSH5-215ENST00000482280 OR2A12Q8NGT7 310 aa20.33■□□□□ 0.85
MSH5-215ENST00000482280 RHBDD1Q8TEB9 315 aa20.33■□□□□ 0.85
MSH5-215ENST00000482280 CENPIQ92674 756 aaPredicted RBP20.33■□□□□ 0.85
MSH5-215ENST00000482280 VCPIP1Q96JH7 1222 aa20.33■□□□□ 0.85
MSH5-215ENST00000482280 CAMK1GQ96NX5 476 aa20.33■□□□□ 0.85
MSH5-215ENST00000482280 CDC6Q99741 560 aa20.33■□□□□ 0.85
MSH5-215ENST00000482280 EPAS1Q99814 870 aa20.33■□□□□ 0.85
MSH5-215ENST00000482280 CNPY3Q9BT09 278 aa20.33■□□□□ 0.85
MSH5-215ENST00000482280 TNKS2Q9H2K2 1166 aa20.33■□□□□ 0.85
MSH5-215ENST00000482280 PARVAQ9NVD7 372 aa20.33■□□□□ 0.85
MSH5-215ENST00000482280 DONSONQ9NYP3 566 aa20.33■□□□□ 0.85
MSH5-215ENST00000482280 DNAI1Q9UI46 699 aa20.33■□□□□ 0.85
MSH5-215ENST00000482280 SARDHQ9UL12 918 aa20.33■□□□□ 0.85
MSH5-215ENST00000482280 APOBEC2Q9Y235 224 aaKnown RBP20.33■□□□□ 0.85
MSH5-215ENST00000482280 SPTBN2O15020 2390 aa20.32■□□□□ 0.84
MSH5-215ENST00000482280 SYCE3A1L190 88 aa20.32■□□□□ 0.84
MSH5-215ENST00000482280 PLK4O00444 970 aa20.32■□□□□ 0.84
MSH5-215ENST00000482280 CCP110O43303 1012 aa20.32■□□□□ 0.84
MSH5-215ENST00000482280 LRIG2O94898 1065 aa20.32■□□□□ 0.84
MSH5-215ENST00000482280 KLHL30Q0D2K2 578 aa20.32■□□□□ 0.84
MSH5-215ENST00000482280 STAT4Q14765 748 aa20.32■□□□□ 0.84
MSH5-215ENST00000482280 POLD3Q15054 466 aaPredicted RBP20.32■□□□□ 0.84
MSH5-215ENST00000482280 SETMARQ53H47 684 aaPredicted RBP20.32■□□□□ 0.84
MSH5-215ENST00000482280 NAPEPLDQ6IQ20 393 aa20.32■□□□□ 0.84
MSH5-215ENST00000482280 MCOLN2Q8IZK6 566 aa20.32■□□□□ 0.84
MSH5-215ENST00000482280 CCDC185Q8N715 623 aa20.32■□□□□ 0.84
MSH5-215ENST00000482280 GRIN3AQ8TCU5 1115 aa20.32■□□□□ 0.84
MSH5-215ENST00000482280 MAGEH1Q9H213 219 aa20.32■□□□□ 0.84
MSH5-215ENST00000482280 PREBQ9HCU5 417 aa20.32■□□□□ 0.84
MSH5-215ENST00000482280 GDF3Q9NR23 364 aa20.32■□□□□ 0.84
MSH5-215ENST00000482280 TMEM248Q9NWD8 314 aa20.32■□□□□ 0.84
MSH5-215ENST00000482280 DMTF1Q9Y222 760 aa20.32■□□□□ 0.84
MSH5-215ENST00000482280 SLCO1B1Q9Y6L6 691 aa20.32■□□□□ 0.84
MSH5-215ENST00000482280 SMAD6O43541 496 aaKnown RBP20.31■□□□□ 0.84
MSH5-215ENST00000482280 CREB3O43889 395 aa20.31■□□□□ 0.84
MSH5-215ENST00000482280 GLDCP23378 1020 aa20.31■□□□□ 0.84
MSH5-215ENST00000482280 EPHB2P29323 1055 aa20.31■□□□□ 0.84
MSH5-215ENST00000482280 MAT2AP31153 395 aaKnown RBP20.31■□□□□ 0.84
MSH5-215ENST00000482280 L1CAMP32004 1257 aa20.31■□□□□ 0.84
MSH5-215ENST00000482280 ARRB1P49407 418 aaPredicted RBP20.31■□□□□ 0.84
MSH5-215ENST00000482280 BNC1Q01954 994 aa20.31■□□□□ 0.84
MSH5-215ENST00000482280 RAB6CQ53S08 254 aa20.31■□□□□ 0.84
MSH5-215ENST00000482280 IRF2BP2Q7Z5L9 587 aa20.31■□□□□ 0.84
MSH5-215ENST00000482280 RAB6CQ9H0N0 254 aa20.31■□□□□ 0.84
MSH5-215ENST00000482280 CATSPERBQ9H7T0 1116 aa20.31■□□□□ 0.84
MSH5-215ENST00000482280 LAMA1P25391 3075 aa20.3■□□□□ 0.84
MSH5-215ENST00000482280 A0A1B0GTH6 734 aa20.3■□□□□ 0.84
MSH5-215ENST00000482280 CXorf51AA0A1B0GTR3 108 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms