RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 RAMP2O60895 175 aa12.15□□□□□ -0.46
HMGN1-213ENST00000482192 ZMPSTE24O75844 475 aa12.15□□□□□ -0.46
HMGN1-213ENST00000482192 KCNK5O95279 499 aa12.15□□□□□ -0.46
HMGN1-213ENST00000482192 SERPING1P05155 500 aa12.15□□□□□ -0.46
HMGN1-213ENST00000482192 IGHV4-34P06331 123 aa12.15□□□□□ -0.46
HMGN1-213ENST00000482192 CSRP1P21291 193 aaKnown RBP12.15□□□□□ -0.46
HMGN1-213ENST00000482192 GLDCP23378 1020 aa12.15□□□□□ -0.46
HMGN1-213ENST00000482192 PSMA2P25787 234 aa12.15□□□□□ -0.46
HMGN1-213ENST00000482192 EPHB2P29323 1055 aa12.15□□□□□ -0.46
HMGN1-213ENST00000482192 RECQLP46063 649 aaPredicted RBP12.15□□□□□ -0.46
HMGN1-213ENST00000482192 GALCP54803 685 aa12.15□□□□□ -0.46
HMGN1-213ENST00000482192 ADPRHP54922 357 aa12.15□□□□□ -0.46
HMGN1-213ENST00000482192 GEMIN4P57678 1058 aaKnown RBP12.15□□□□□ -0.46
HMGN1-213ENST00000482192 ARF5P84085 180 aa12.15□□□□□ -0.46
HMGN1-213ENST00000482192 GRIK2Q13002 908 aa12.15□□□□□ -0.46
HMGN1-213ENST00000482192 TEAD4Q15561 434 aa12.15□□□□□ -0.46
HMGN1-213ENST00000482192 HGSNATQ68CP4 663 aa12.15□□□□□ -0.46
HMGN1-213ENST00000482192 C22orf39Q6P5X5 142 aa12.15□□□□□ -0.46
HMGN1-213ENST00000482192 NCEH1Q6PIU2 408 aa12.15□□□□□ -0.46
HMGN1-213ENST00000482192 OR2A12Q8NGT7 310 aa12.15□□□□□ -0.46
HMGN1-213ENST00000482192 OR14C36Q8NHC7 312 aa12.15□□□□□ -0.46
HMGN1-213ENST00000482192 C1orf216Q8TAB5 229 aa12.15□□□□□ -0.46
HMGN1-213ENST00000482192 PIP4K2CQ8TBX8 421 aa12.15□□□□□ -0.46
HMGN1-213ENST00000482192 FNIP1Q8TF40 1166 aa12.15□□□□□ -0.46
HMGN1-213ENST00000482192 CPLX3Q8WVH0 158 aa12.15□□□□□ -0.46
HMGN1-213ENST00000482192 FAM131CQ96AQ9 280 aa12.15□□□□□ -0.46
HMGN1-213ENST00000482192 ZNF653Q96CK0 615 aa12.15□□□□□ -0.46
HMGN1-213ENST00000482192 EPAS1Q99814 870 aa12.15□□□□□ -0.46
HMGN1-213ENST00000482192 ACE2Q9BYF1 805 aaPredicted RBP12.15□□□□□ -0.46
HMGN1-213ENST00000482192 MAGEB5Q9BZ81 275 aa12.15□□□□□ -0.46
HMGN1-213ENST00000482192 CEP44Q9C0F1 390 aa12.15□□□□□ -0.46
HMGN1-213ENST00000482192 MAGEH1Q9H213 219 aa12.15□□□□□ -0.46
HMGN1-213ENST00000482192 TSPY26PQ9H489 355 aa12.15□□□□□ -0.46
HMGN1-213ENST00000482192 MRPL47Q9HD33 250 aaKnown RBP12.15□□□□□ -0.46
HMGN1-213ENST00000482192 DNAAF2Q9NVR5 837 aaKnown RBP12.15□□□□□ -0.46
HMGN1-213ENST00000482192 DNAI1Q9UI46 699 aa12.15□□□□□ -0.46
HMGN1-213ENST00000482192 SARDHQ9UL12 918 aa12.15□□□□□ -0.46
HMGN1-213ENST00000482192 TPX2Q9ULW0 747 aaKnown RBP12.15□□□□□ -0.46
HMGN1-213ENST00000482192 FZD10Q9ULW2 581 aa12.15□□□□□ -0.46
HMGN1-213ENST00000482192 HPCAL4Q9UM19 191 aa12.15□□□□□ -0.46
HMGN1-213ENST00000482192 LUC7L2Q9Y383 392 aaKnown RBP12.15□□□□□ -0.46
HMGN1-213ENST00000482192 NYNRINQ9P2P1 1898 aaKnown RBP12.14□□□□□ -0.47
HMGN1-213ENST00000482192 PCDH15Q96QU1 1955 aa12.14□□□□□ -0.47
HMGN1-213ENST00000482192 CEP192Q8TEP8 1941 aa12.14□□□□□ -0.47
HMGN1-213ENST00000482192 EIF3CLB5ME19 914 aaKnown RBP12.14□□□□□ -0.47
HMGN1-213ENST00000482192 FGF10O15520 208 aaPredicted RBP12.14□□□□□ -0.47
HMGN1-213ENST00000482192 SMAD6O43541 496 aaKnown RBP12.14□□□□□ -0.47
HMGN1-213ENST00000482192 CREB3O43889 395 aa12.14□□□□□ -0.47
HMGN1-213ENST00000482192 RNF8O76064 485 aa12.14□□□□□ -0.47
HMGN1-213ENST00000482192 PRNPP04156 253 aa12.14□□□□□ -0.47
HMGN1-213ENST00000482192 GYPCP04921 128 aa12.14□□□□□ -0.47
HMGN1-213ENST00000482192 ADRB1P08588 477 aa12.14□□□□□ -0.47
HMGN1-213ENST00000482192 CHRNA3P32297 505 aa12.14□□□□□ -0.47
HMGN1-213ENST00000482192 HTR7P34969 479 aa12.14□□□□□ -0.47
HMGN1-213ENST00000482192 DRD3P35462 400 aa12.14□□□□□ -0.47
HMGN1-213ENST00000482192 ACVRL1P37023 503 aa12.14□□□□□ -0.47
HMGN1-213ENST00000482192 GRIA4P48058 902 aa12.14□□□□□ -0.47
HMGN1-213ENST00000482192 NOVA1P51513 510 aaKnown RBP12.14□□□□□ -0.47
HMGN1-213ENST00000482192 METAP1P53582 386 aa12.14□□□□□ -0.47
HMGN1-213ENST00000482192 SEMA3BQ13214 749 aa12.14□□□□□ -0.47
HMGN1-213ENST00000482192 POLD3Q15054 466 aaPredicted RBP12.14□□□□□ -0.47
HMGN1-213ENST00000482192 PSAPL1Q6NUJ1 521 aa12.14□□□□□ -0.47
HMGN1-213ENST00000482192 IL27RAQ6UWB1 636 aa12.14□□□□□ -0.47
HMGN1-213ENST00000482192 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.14□□□□□ -0.47
HMGN1-213ENST00000482192 DNAAF5Q86Y56 855 aa12.14□□□□□ -0.47
HMGN1-213ENST00000482192 PYROXD2Q8N2H3 581 aa12.14□□□□□ -0.47
HMGN1-213ENST00000482192 PCDH20Q8N6Y1 951 aaKnown RBP12.14□□□□□ -0.47
HMGN1-213ENST00000482192 RTL3Q8N8U3 475 aaKnown RBP12.14□□□□□ -0.47
HMGN1-213ENST00000482192 ARHGEF2Q92974 986 aaKnown RBP12.14□□□□□ -0.47
HMGN1-213ENST00000482192 EIF3CQ99613 913 aaKnown RBP12.14□□□□□ -0.47
HMGN1-213ENST00000482192 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.14□□□□□ -0.47
HMGN1-213ENST00000482192 XPO4Q9C0E2 1151 aaKnown RBP12.14□□□□□ -0.47
HMGN1-213ENST00000482192 ISCUQ9H1K1 167 aa12.14□□□□□ -0.47
HMGN1-213ENST00000482192 KDM4CQ9H3R0 1056 aa12.14□□□□□ -0.47
HMGN1-213ENST00000482192 CATSPERBQ9H7T0 1116 aa12.14□□□□□ -0.47
HMGN1-213ENST00000482192 TM9SF3Q9HD45 589 aa12.14□□□□□ -0.47
HMGN1-213ENST00000482192 NDFIP2Q9NV92 336 aa12.14□□□□□ -0.47
HMGN1-213ENST00000482192 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.14□□□□□ -0.471e-14■■■□□ 15.4
HMGN1-213ENST00000482192 DMXL1Q9Y485 3027 aa12.14□□□□□ -0.47
HMGN1-213ENST00000482192 SDK1Q7Z5N4 2213 aa12.14□□□□□ -0.47
HMGN1-213ENST00000482192 DCHS1Q96JQ0 3298 aa12.13□□□□□ -0.47
HMGN1-213ENST00000482192 A0A1W2PPC4 97 aa12.13□□□□□ -0.47
HMGN1-213ENST00000482192 UPK3BL1B0FP48 263 aa12.13□□□□□ -0.47
HMGN1-213ENST00000482192 C10orf142B7Z368 130 aa12.13□□□□□ -0.47
HMGN1-213ENST00000482192 UPK3BL2E5RIL1 263 aa12.13□□□□□ -0.47
HMGN1-213ENST00000482192 KPNA3O00505 521 aaPredicted RBP12.13□□□□□ -0.47
HMGN1-213ENST00000482192 CBFA2T2O43439 604 aa12.13□□□□□ -0.47
HMGN1-213ENST00000482192 PLRG1O43660 514 aaKnown RBP12.13□□□□□ -0.47
HMGN1-213ENST00000482192 CER1O95813 267 aa12.13□□□□□ -0.47
HMGN1-213ENST00000482192 CTSLP07711 333 aa12.13□□□□□ -0.47
HMGN1-213ENST00000482192 CEACAM1P13688 526 aa12.13□□□□□ -0.47
HMGN1-213ENST00000482192 CSNK1EP49674 416 aaKnown RBP12.13□□□□□ -0.47
HMGN1-213ENST00000482192 CCR5P51681 352 aa12.13□□□□□ -0.47
HMGN1-213ENST00000482192 RACK1P63244 317 aaKnown RBP12.13□□□□□ -0.47
HMGN1-213ENST00000482192 ZNF252P-AS1Q0IIN9 211 aa12.13□□□□□ -0.47
HMGN1-213ENST00000482192 CCDC15Q0P6D6 951 aa12.13□□□□□ -0.47
HMGN1-213ENST00000482192 CNTN1Q12860 1018 aa12.13□□□□□ -0.47
HMGN1-213ENST00000482192 SLC14A1Q13336 389 aa12.13□□□□□ -0.47
HMGN1-213ENST00000482192 POM121L1PQ3SYA9 428 aa12.13□□□□□ -0.47
HMGN1-213ENST00000482192 AGBL4Q5VU57 503 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms