RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 ASTLQ6HA08 431 aaPredicted RBP11.85□□□□□ -0.51
HPS4-212ENST00000481910 GRAMD4Q6IC98 578 aa11.85□□□□□ -0.51
HPS4-212ENST00000481910 NPNTQ6UXI9 565 aa11.85□□□□□ -0.51
HPS4-212ENST00000481910 ADAT2Q7Z6V5 191 aaKnown RBP11.85□□□□□ -0.51
HPS4-212ENST00000481910 ZNF354CQ86Y25 554 aa11.85□□□□□ -0.51
HPS4-212ENST00000481910 SLC13A5Q86YT5 568 aaPredicted RBP11.85□□□□□ -0.51
HPS4-212ENST00000481910 MS4A14Q96JA4 679 aa11.85□□□□□ -0.51
HPS4-212ENST00000481910 PNKPQ96T60 521 aa11.85□□□□□ -0.51
HPS4-212ENST00000481910 FEM1AQ9BSK4 669 aa11.85□□□□□ -0.51
HPS4-212ENST00000481910 SPON2Q9BUD6 331 aa11.85□□□□□ -0.51
HPS4-212ENST00000481910 SLC39A8Q9C0K1 460 aa11.85□□□□□ -0.51
HPS4-212ENST00000481910 FAM107BQ9H098 131 aa11.85□□□□□ -0.51
HPS4-212ENST00000481910 MAGEH1Q9H213 219 aa11.85□□□□□ -0.51
HPS4-212ENST00000481910 NOL6Q9H6R4 1146 aaKnown RBP11.85□□□□□ -0.51
HPS4-212ENST00000481910 MUTYHQ9UIF7 546 aa11.85□□□□□ -0.51
HPS4-212ENST00000481910 GGA2Q9UJY4 613 aa11.85□□□□□ -0.51
HPS4-212ENST00000481910 VPS28Q9UK41 221 aa11.85□□□□□ -0.51
HPS4-212ENST00000481910 TCRBV7S2A1N4TA0A589 114 aa11.84□□□□□ -0.51
HPS4-212ENST00000481910 RASA4BC9J798 803 aa11.84□□□□□ -0.51
HPS4-212ENST00000481910 APOC4-APOC2K7ER74 178 aa11.84□□□□□ -0.51
HPS4-212ENST00000481910 DFFAO00273 331 aa11.84□□□□□ -0.51
HPS4-212ENST00000481910 RASA4O43374 803 aa11.84□□□□□ -0.51
HPS4-212ENST00000481910 MFSD11O43934 449 aa11.84□□□□□ -0.51
HPS4-212ENST00000481910 MAP3K6O95382 1288 aa11.84□□□□□ -0.51
HPS4-212ENST00000481910 APOC2P02655 101 aa11.84□□□□□ -0.51
HPS4-212ENST00000481910 PABPC1P11940 636 aaKnown RBP11.84□□□□□ -0.51
HPS4-212ENST00000481910 ETFBP38117 255 aa11.84□□□□□ -0.51
HPS4-212ENST00000481910 GALK1P51570 392 aa11.84□□□□□ -0.51
HPS4-212ENST00000481910 GBE1Q04446 702 aa11.84□□□□□ -0.51
HPS4-212ENST00000481910 SLC10A2Q12908 348 aaPredicted RBP11.84□□□□□ -0.51
HPS4-212ENST00000481910 SLC12A1Q13621 1099 aa11.84□□□□□ -0.51
HPS4-212ENST00000481910 PARP15Q460N3 678 aa11.84□□□□□ -0.51
HPS4-212ENST00000481910 PREPLQ4J6C6 727 aaPredicted RBP11.84□□□□□ -0.51
HPS4-212ENST00000481910 C4orf46Q504U0 113 aa11.84□□□□□ -0.51
HPS4-212ENST00000481910 IL31Q6EBC2 164 aa11.84□□□□□ -0.51
HPS4-212ENST00000481910 ZNF783Q6ZMS7 281 aa11.84□□□□□ -0.51
HPS4-212ENST00000481910 TP53INP2Q8IXH6 220 aa11.84□□□□□ -0.51
HPS4-212ENST00000481910 APCDD1Q8J025 514 aa11.84□□□□□ -0.51
HPS4-212ENST00000481910 RASGEF1CQ8N431 466 aa11.84□□□□□ -0.51
HPS4-212ENST00000481910 CCDC33Q8N5R6 958 aa11.84□□□□□ -0.51
HPS4-212ENST00000481910 OR7D4Q8NG98 312 aa11.84□□□□□ -0.51
HPS4-212ENST00000481910 HAUS1Q96CS2 278 aa11.84□□□□□ -0.51
HPS4-212ENST00000481910 CAPZA3Q96KX2 299 aa11.84□□□□□ -0.51
HPS4-212ENST00000481910 P2RY13Q9BPV8 354 aa11.84□□□□□ -0.51
HPS4-212ENST00000481910 SPOCK3Q9BQ16 436 aa11.84□□□□□ -0.51
HPS4-212ENST00000481910 LRRC19Q9H756 370 aa11.84□□□□□ -0.51
HPS4-212ENST00000481910 DTLQ9NZJ0 730 aa11.84□□□□□ -0.51
HPS4-212ENST00000481910 FBXL21Q9UKT6 434 aa11.84□□□□□ -0.51
HPS4-212ENST00000481910 SLC27A6Q9Y2P4 619 aa11.84□□□□□ -0.51
HPS4-212ENST00000481910 TBC1D3BA6NDS4 549 aa11.84□□□□□ -0.51
HPS4-212ENST00000481910 ARHGAP42A6NI28 874 aa11.84□□□□□ -0.51
HPS4-212ENST00000481910 URI1O94763 535 aaPredicted RBP11.84□□□□□ -0.51
HPS4-212ENST00000481910 TPP2P29144 1249 aaPredicted RBP11.84□□□□□ -0.51
HPS4-212ENST00000481910 ACVRL1P37023 503 aa11.84□□□□□ -0.51
HPS4-212ENST00000481910 NR2C2P49116 596 aa11.84□□□□□ -0.51
HPS4-212ENST00000481910 PAPOLAP51003 745 aaKnown RBP11.84□□□□□ -0.51
HPS4-212ENST00000481910 KDSRQ06136 332 aa11.84□□□□□ -0.51
HPS4-212ENST00000481910 MESP2Q0VG99 397 aa11.84□□□□□ -0.51
HPS4-212ENST00000481910 KLF1Q13351 362 aaPredicted RBP11.84□□□□□ -0.51
HPS4-212ENST00000481910 GEN1Q17RS7 908 aa11.84□□□□□ -0.51
HPS4-212ENST00000481910 PLEKHG6Q3KR16 790 aa11.84□□□□□ -0.51
HPS4-212ENST00000481910 AFMIDQ63HM1 303 aa11.84□□□□□ -0.51
HPS4-212ENST00000481910 TXNDC11Q6PKC3 985 aa11.84□□□□□ -0.51
HPS4-212ENST00000481910 TPRG1Q6ZUI0 275 aa11.84□□□□□ -0.51
HPS4-212ENST00000481910 NUDT18Q6ZVK8 323 aa11.84□□□□□ -0.51
HPS4-212ENST00000481910 BZW1Q7L1Q6 419 aaKnown RBP11.84□□□□□ -0.51
HPS4-212ENST00000481910 ARHGAP12Q8IWW6 846 aa11.84□□□□□ -0.51
HPS4-212ENST00000481910 UBALD2Q8IYN6 164 aa11.84□□□□□ -0.51
HPS4-212ENST00000481910 AHI1Q8N157 1196 aa11.84□□□□□ -0.51
HPS4-212ENST00000481910 TTC30BQ8N4P2 665 aa11.84□□□□□ -0.51
HPS4-212ENST00000481910 ACTRT1Q8TDG2 376 aa11.84□□□□□ -0.51
HPS4-212ENST00000481910 ARHGEF2Q92974 986 aaKnown RBP11.84□□□□□ -0.51
HPS4-212ENST00000481910 EXOC4Q96A65 974 aa11.84□□□□□ -0.51
HPS4-212ENST00000481910 LMLNQ96KR4 655 aa11.84□□□□□ -0.51
HPS4-212ENST00000481910 NAP1L3Q99457 506 aaPredicted RBP11.84□□□□□ -0.51
HPS4-212ENST00000481910 ATP13A1Q9HD20 1204 aa11.84□□□□□ -0.51
HPS4-212ENST00000481910 WNT16Q9UBV4 365 aa11.84□□□□□ -0.51
HPS4-212ENST00000481910 TTC7AQ9ULT0 858 aaPredicted RBP11.84□□□□□ -0.51
HPS4-212ENST00000481910 CA14Q9ULX7 337 aa11.84□□□□□ -0.51
HPS4-212ENST00000481910 HPCAL4Q9UM19 191 aa11.84□□□□□ -0.51
HPS4-212ENST00000481910 TMEM98Q9Y2Y6 226 aa11.84□□□□□ -0.51
HPS4-212ENST00000481910 F5P12259 2224 aa11.83□□□□□ -0.51
HPS4-212ENST00000481910 COL4A3Q01955 1670 aa11.83□□□□□ -0.52
HPS4-212ENST00000481910 COL4A2P08572 1712 aa11.83□□□□□ -0.52
HPS4-212ENST00000481910 CHD5Q8TDI0 1954 aa11.83□□□□□ -0.52
HPS4-212ENST00000481910 CBX4O00257 560 aa11.83□□□□□ -0.52
HPS4-212ENST00000481910 PGRMC1O00264 195 aaKnown RBP11.83□□□□□ -0.52
HPS4-212ENST00000481910 NCAM2O15394 837 aa11.83□□□□□ -0.52
HPS4-212ENST00000481910 KAT7O95251 611 aa11.83□□□□□ -0.52
HPS4-212ENST00000481910 APODP05090 189 aa11.83□□□□□ -0.52
HPS4-212ENST00000481910 NAT2P11245 290 aa11.83□□□□□ -0.52
HPS4-212ENST00000481910 GRIA2P42262 883 aa11.83□□□□□ -0.52
HPS4-212ENST00000481910 PLK1P53350 603 aa11.83□□□□□ -0.52
HPS4-212ENST00000481910 OTUD4Q01804 1114 aaKnown RBP11.83□□□□□ -0.52
HPS4-212ENST00000481910 DMC1Q14565 340 aa11.83□□□□□ -0.52
HPS4-212ENST00000481910 PON2Q15165 354 aa11.83□□□□□ -0.52
HPS4-212ENST00000481910 MLF2Q15773 248 aaPredicted RBP11.83□□□□□ -0.52
HPS4-212ENST00000481910 PITRM1Q5JRX3 1037 aa11.83□□□□□ -0.52
HPS4-212ENST00000481910 ADIPOR2Q86V24 386 aa11.83□□□□□ -0.52
HPS4-212ENST00000481910 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms