RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 C14orf80Q86SX3 495 aa12.43□□□□□ -0.42
SQSTM1-207ENST00000481335 TBC1D3Q8IZP1 549 aaPredicted RBP12.43□□□□□ -0.42
SQSTM1-207ENST00000481335 ATP11CQ8NB49 1132 aa12.43□□□□□ -0.42
SQSTM1-207ENST00000481335 FAM174AQ8TBP5 190 aa12.43□□□□□ -0.42
SQSTM1-207ENST00000481335 PPP1R16AQ96I34 528 aa12.43□□□□□ -0.42
SQSTM1-207ENST00000481335 SERAC1Q96JX3 654 aa12.43□□□□□ -0.42
SQSTM1-207ENST00000481335 PSMB7Q99436 277 aa12.43□□□□□ -0.42
SQSTM1-207ENST00000481335 ZYG11BQ9C0D3 744 aa12.43□□□□□ -0.42
SQSTM1-207ENST00000481335 EBF2Q9HAK2 575 aa12.43□□□□□ -0.42
SQSTM1-207ENST00000481335 ANLNQ9NQW6 1124 aa12.43□□□□□ -0.42
SQSTM1-207ENST00000481335 TAB2Q9NYJ8 693 aa12.43□□□□□ -0.42
SQSTM1-207ENST00000481335 DKK4Q9UBT3 224 aa12.43□□□□□ -0.42
SQSTM1-207ENST00000481335 FTSJ1Q9UET6 329 aa12.43□□□□□ -0.42
SQSTM1-207ENST00000481335 VPS51Q9UID3 782 aa12.43□□□□□ -0.42
SQSTM1-207ENST00000481335 PRAMEF26H0Y7S4 382 aa12.42□□□□□ -0.42
SQSTM1-207ENST00000481335 GOLGA6L22H0YM25 854 aa12.42□□□□□ -0.42
SQSTM1-207ENST00000481335 TLR4O00206 839 aa12.42□□□□□ -0.42
SQSTM1-207ENST00000481335 C1SP09871 688 aa12.42□□□□□ -0.42
SQSTM1-207ENST00000481335 TFE3P19532 575 aaPredicted RBP12.42□□□□□ -0.42
SQSTM1-207ENST00000481335 SDC4P31431 198 aa12.42□□□□□ -0.42
SQSTM1-207ENST00000481335 SOX5P35711 763 aa12.42□□□□□ -0.42
SQSTM1-207ENST00000481335 GGCXP38435 758 aa12.42□□□□□ -0.42
SQSTM1-207ENST00000481335 STAT1P42224 750 aa12.42□□□□□ -0.42
SQSTM1-207ENST00000481335 PTPN9P43378 593 aa12.42□□□□□ -0.42
SQSTM1-207ENST00000481335 RECQLP46063 649 aaPredicted RBP12.42□□□□□ -0.42
SQSTM1-207ENST00000481335 GEMIN4P57678 1058 aaKnown RBP12.42□□□□□ -0.42
SQSTM1-207ENST00000481335 NXPH1P58417 271 aa12.42□□□□□ -0.42
SQSTM1-207ENST00000481335 FMO1Q01740 532 aa12.42□□□□□ -0.42
SQSTM1-207ENST00000481335 CNTN1Q12860 1018 aa12.42□□□□□ -0.42
SQSTM1-207ENST00000481335 KCNT1Q5JUK3 1230 aa12.42□□□□□ -0.42
SQSTM1-207ENST00000481335 NAA35Q5VZE5 725 aa12.42□□□□□ -0.42
SQSTM1-207ENST00000481335 C22orf39Q6P5X5 142 aa12.42□□□□□ -0.42
SQSTM1-207ENST00000481335 LAYNQ6UX15 382 aa12.42□□□□□ -0.42
SQSTM1-207ENST00000481335 SLCO6A1Q86UG4 719 aa12.42□□□□□ -0.42
SQSTM1-207ENST00000481335 PCDH20Q8N6Y1 951 aaKnown RBP12.42□□□□□ -0.42
SQSTM1-207ENST00000481335 OR2A12Q8NGT7 310 aa12.42□□□□□ -0.42
SQSTM1-207ENST00000481335 CFAP57Q96MR6 1250 aa12.42□□□□□ -0.42
SQSTM1-207ENST00000481335 DYRK4Q9NR20 520 aa12.42□□□□□ -0.42
SQSTM1-207ENST00000481335 ANO10Q9NW15 660 aa12.42□□□□□ -0.42
SQSTM1-207ENST00000481335 ARHGAP20Q9P2F6 1191 aa12.42□□□□□ -0.42
SQSTM1-207ENST00000481335 ZNF212Q9UDV6 495 aa12.42□□□□□ -0.42
SQSTM1-207ENST00000481335 SARDHQ9UL12 918 aa12.42□□□□□ -0.42
SQSTM1-207ENST00000481335 APC2O95996 2303 aa12.42□□□□□ -0.42
SQSTM1-207ENST00000481335 SRRM3A6NNA2 597 aaPredicted RBP12.41□□□□□ -0.42
SQSTM1-207ENST00000481335 GOLGA8SH3BPF8 625 aa12.41□□□□□ -0.42
SQSTM1-207ENST00000481335 GFPT2O94808 682 aa12.41□□□□□ -0.42
SQSTM1-207ENST00000481335 WNT1P04628 370 aa12.41□□□□□ -0.42
SQSTM1-207ENST00000481335 CAPNS1P04632 268 aa12.41□□□□□ -0.42
SQSTM1-207ENST00000481335 ITGAVP06756 1048 aa12.41□□□□□ -0.42
SQSTM1-207ENST00000481335 EPHA8P29322 1005 aaPredicted RBP12.41□□□□□ -0.42
SQSTM1-207ENST00000481335 CHRNA3P32297 505 aa12.41□□□□□ -0.42
SQSTM1-207ENST00000481335 MAPKAPK2P49137 400 aa12.41□□□□□ -0.42
SQSTM1-207ENST00000481335 SERPINH1P50454 418 aaKnown RBP12.41□□□□□ -0.42
SQSTM1-207ENST00000481335 POLR2FP61218 127 aaKnown RBP12.41□□□□□ -0.42
SQSTM1-207ENST00000481335 PPP2CBP62714 309 aa12.41□□□□□ -0.42
SQSTM1-207ENST00000481335 PPP2CAP67775 309 aa12.41□□□□□ -0.42
SQSTM1-207ENST00000481335 MYL5Q02045 173 aa12.41□□□□□ -0.42
SQSTM1-207ENST00000481335 PIP5KL1Q5T9C9 394 aa12.41□□□□□ -0.42
SQSTM1-207ENST00000481335 MANEALQ5VSG8 457 aa12.41□□□□□ -0.42
SQSTM1-207ENST00000481335 FAM131BQ86XD5 332 aa12.41□□□□□ -0.42
SQSTM1-207ENST00000481335 PROSER1Q86XN7 944 aa12.41□□□□□ -0.42
SQSTM1-207ENST00000481335 PLPP6Q8IY26 295 aa12.41□□□□□ -0.42
SQSTM1-207ENST00000481335 PNPLA1Q8N8W4 532 aa12.41□□□□□ -0.42
SQSTM1-207ENST00000481335 SAP25Q8TEE9 199 aa12.41□□□□□ -0.42
SQSTM1-207ENST00000481335 CPA5Q8WXQ8 436 aa12.41□□□□□ -0.42
SQSTM1-207ENST00000481335 HDAC8Q9BY41 377 aa12.41□□□□□ -0.42
SQSTM1-207ENST00000481335 OSBPL2Q9H1P3 480 aa12.41□□□□□ -0.42
SQSTM1-207ENST00000481335 VPS16Q9H269 839 aa12.41□□□□□ -0.42
SQSTM1-207ENST00000481335 METTL5Q9NRN9 209 aaKnown RBP12.41□□□□□ -0.42
SQSTM1-207ENST00000481335 FAM207AQ9NSI2 230 aaPredicted RBP12.41□□□□□ -0.42
SQSTM1-207ENST00000481335 BTBD3Q9Y2F9 522 aa12.41□□□□□ -0.42
SQSTM1-207ENST00000481335 SIK3Q9Y2K2 1263 aa12.41□□□□□ -0.42
SQSTM1-207ENST00000481335 DSPP15924 2871 aaKnown RBP12.41□□□□□ -0.42
SQSTM1-207ENST00000481335 LAMA5O15230 3695 aa12.4□□□□□ -0.42
SQSTM1-207ENST00000481335 A0A0D9SEW6 157 aa12.4□□□□□ -0.42
SQSTM1-207ENST00000481335 LRRC10BA6NIK2 292 aa12.4□□□□□ -0.42
SQSTM1-207ENST00000481335 LGALS16A8MUM7 142 aa12.4□□□□□ -0.42
SQSTM1-207ENST00000481335 SNAP91O60641 907 aa12.4□□□□□ -0.42
SQSTM1-207ENST00000481335 RTN2O75298 545 aa12.4□□□□□ -0.42
SQSTM1-207ENST00000481335 MT-CO1P00395 513 aa12.4□□□□□ -0.42
SQSTM1-207ENST00000481335 CALB1P05937 261 aa12.4□□□□□ -0.42
SQSTM1-207ENST00000481335 CTSLP07711 333 aa12.4□□□□□ -0.42
SQSTM1-207ENST00000481335 ATXN1LP0C7T5 689 aaKnown RBP12.4□□□□□ -0.42
SQSTM1-207ENST00000481335 UNGP13051 313 aaPredicted RBP12.4□□□□□ -0.42
SQSTM1-207ENST00000481335 NSFP46459 744 aaKnown RBP12.4□□□□□ -0.42
SQSTM1-207ENST00000481335 GNA12Q03113 381 aa12.4□□□□□ -0.42
SQSTM1-207ENST00000481335 ILKQ13418 452 aa12.4□□□□□ -0.42
SQSTM1-207ENST00000481335 STAT4Q14765 748 aa12.4□□□□□ -0.42
SQSTM1-207ENST00000481335 SMAD1Q15797 465 aaKnown RBP12.4□□□□□ -0.42
SQSTM1-207ENST00000481335 STX1AQ16623 288 aa12.4□□□□□ -0.42
SQSTM1-207ENST00000481335 ARTNQ5T4W7 220 aa12.4□□□□□ -0.42
SQSTM1-207ENST00000481335 TRNP1Q6NT89 227 aa12.4□□□□□ -0.42
SQSTM1-207ENST00000481335 PPP1R2P3Q6NXS1 205 aa12.4□□□□□ -0.42
SQSTM1-207ENST00000481335 SASS6Q6UVJ0 657 aa12.4□□□□□ -0.42
SQSTM1-207ENST00000481335 TFAP2DQ7Z6R9 452 aa12.4□□□□□ -0.42
SQSTM1-207ENST00000481335 PHF13Q86YI8 300 aaPredicted RBP12.4□□□□□ -0.42
SQSTM1-207ENST00000481335 TMEM145Q8NBT3 493 aa12.4□□□□□ -0.42
SQSTM1-207ENST00000481335 C3orf20Q8ND61 904 aa12.4□□□□□ -0.42
SQSTM1-207ENST00000481335 NEK11Q8NG66 645 aa12.4□□□□□ -0.42
SQSTM1-207ENST00000481335 NTAN1Q96AB6 310 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms