RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 SPON2Q9BUD6 331 aa15.62■□□□□ 0.09
LIMS3-203ENST00000480744 NAA15Q9BXJ9 866 aaKnown RBP15.62■□□□□ 0.09
LIMS3-203ENST00000480744 HS3ST2Q9Y278 367 aa15.62■□□□□ 0.09
LIMS3-203ENST00000480744 DSPP15924 2871 aaKnown RBP15.62■□□□□ 0.09
LIMS3-203ENST00000480744 ZFYVE26Q68DK2 2539 aa15.62■□□□□ 0.09
LIMS3-203ENST00000480744 ACACAQ13085 2346 aa15.62■□□□□ 0.09
LIMS3-203ENST00000480744 MYLKQ15746 1914 aa15.62■□□□□ 0.09
LIMS3-203ENST00000480744 A0A0D9SEW6 157 aa15.61■□□□□ 0.09
LIMS3-203ENST00000480744 ENC1O14682 589 aa15.61■□□□□ 0.09
LIMS3-203ENST00000480744 SMAD6O43541 496 aaKnown RBP15.61■□□□□ 0.09
LIMS3-203ENST00000480744 RNGTTO60942 597 aaKnown RBP15.61■□□□□ 0.09
LIMS3-203ENST00000480744 GFPT2O94808 682 aa15.61■□□□□ 0.09
LIMS3-203ENST00000480744 CTSLP07711 333 aa15.61■□□□□ 0.09
LIMS3-203ENST00000480744 EEF1GP26641 437 aaKnown RBP15.61■□□□□ 0.09
LIMS3-203ENST00000480744 OR1E1P30953 314 aa15.61■□□□□ 0.09
LIMS3-203ENST00000480744 CHRNA3P32297 505 aa15.61■□□□□ 0.09
LIMS3-203ENST00000480744 BNIP3Q12983 259 aa15.61■□□□□ 0.09
LIMS3-203ENST00000480744 DNAJC3Q13217 504 aa15.61■□□□□ 0.09
LIMS3-203ENST00000480744 STAT4Q14765 748 aa15.61■□□□□ 0.09
LIMS3-203ENST00000480744 SETMARQ53H47 684 aaPredicted RBP15.61■□□□□ 0.09
LIMS3-203ENST00000480744 TRNP1Q6NT89 227 aa15.61■□□□□ 0.09
LIMS3-203ENST00000480744 TRIM69Q86WT6 500 aa15.61■□□□□ 0.09
LIMS3-203ENST00000480744 FAM131BQ86XD5 332 aa15.61■□□□□ 0.09
LIMS3-203ENST00000480744 MFSD2AQ8NA29 543 aa15.61■□□□□ 0.09
LIMS3-203ENST00000480744 DCAF4L2Q8NA75 395 aa15.61■□□□□ 0.09
LIMS3-203ENST00000480744 OR7D4Q8NG98 312 aa15.61■□□□□ 0.09
LIMS3-203ENST00000480744 GRIN3AQ8TCU5 1115 aa15.61■□□□□ 0.09
LIMS3-203ENST00000480744 EPS8L1Q8TE68 723 aa15.61■□□□□ 0.09
LIMS3-203ENST00000480744 KLK6Q92876 244 aa15.61■□□□□ 0.09
LIMS3-203ENST00000480744 FAM131CQ96AQ9 280 aa15.61■□□□□ 0.09
LIMS3-203ENST00000480744 STK33Q9BYT3 514 aa15.61■□□□□ 0.09
LIMS3-203ENST00000480744 VPS16Q9H269 839 aa15.61■□□□□ 0.09
LIMS3-203ENST00000480744 TNKS2Q9H2K2 1166 aa15.61■□□□□ 0.09
LIMS3-203ENST00000480744 DYRK4Q9NR20 520 aa15.61■□□□□ 0.09
LIMS3-203ENST00000480744 METTL5Q9NRN9 209 aaKnown RBP15.61■□□□□ 0.09
LIMS3-203ENST00000480744 LMBRD1Q9NUN5 540 aa15.61■□□□□ 0.09
LIMS3-203ENST00000480744 ARHGAP20Q9P2F6 1191 aa15.61■□□□□ 0.09
LIMS3-203ENST00000480744 DMTF1Q9Y222 760 aa15.61■□□□□ 0.09
LIMS3-203ENST00000480744 CA5BQ9Y2D0 317 aa15.61■□□□□ 0.09
LIMS3-203ENST00000480744 TRPM6Q9BX84 2022 aa15.61■□□□□ 0.09
LIMS3-203ENST00000480744 DRGXA6NNA5 263 aa15.6■□□□□ 0.09
LIMS3-203ENST00000480744 SLC31A1O15431 190 aa15.6■□□□□ 0.09
LIMS3-203ENST00000480744 ENDOD1O94919 500 aa15.6■□□□□ 0.09
LIMS3-203ENST00000480744 GLDCP23378 1020 aa15.6■□□□□ 0.09
LIMS3-203ENST00000480744 NUDT1P36639 197 aa15.6■□□□□ 0.09
LIMS3-203ENST00000480744 RECQLP46063 649 aaPredicted RBP15.6■□□□□ 0.09
LIMS3-203ENST00000480744 NOMO3P69849 1222 aa15.6■□□□□ 0.09
LIMS3-203ENST00000480744 ATP11AP98196 1134 aa15.6■□□□□ 0.09
LIMS3-203ENST00000480744 PIP5KL1Q5T9C9 394 aa15.6■□□□□ 0.09
LIMS3-203ENST00000480744 C22orf39Q6P5X5 142 aa15.6■□□□□ 0.09
LIMS3-203ENST00000480744 C19orf48Q6RUI8 117 aa15.6■□□□□ 0.09
LIMS3-203ENST00000480744 PHLDB2Q86SQ0 1253 aa15.6■□□□□ 0.09
LIMS3-203ENST00000480744 SPATS2Q86XZ4 545 aaKnown RBP15.6■□□□□ 0.09
LIMS3-203ENST00000480744 DRC7Q8IY82 874 aa15.6■□□□□ 0.09
LIMS3-203ENST00000480744 OXR1Q8N573 874 aa15.6■□□□□ 0.09
LIMS3-203ENST00000480744 EMC1Q8N766 993 aa15.6■□□□□ 0.09
LIMS3-203ENST00000480744 CHST14Q8NCH0 376 aa15.6■□□□□ 0.09
LIMS3-203ENST00000480744 OR2A12Q8NGT7 310 aa15.6■□□□□ 0.09
LIMS3-203ENST00000480744 SLC20A1Q8WUM9 679 aa15.6■□□□□ 0.09
LIMS3-203ENST00000480744 ARRDC3Q96B67 414 aa15.6■□□□□ 0.09
LIMS3-203ENST00000480744 C1orf74Q96LT6 269 aa15.6■□□□□ 0.09
LIMS3-203ENST00000480744 PREBQ9HCU5 417 aa15.6■□□□□ 0.09
LIMS3-203ENST00000480744 ARID1BQ8NFD5 2236 aaPredicted RBP15.6■□□□□ 0.09
LIMS3-203ENST00000480744 FREM2Q5SZK8 3169 aa15.6■□□□□ 0.09
LIMS3-203ENST00000480744 APC2O95996 2303 aa15.6■□□□□ 0.09
LIMS3-203ENST00000480744 A0A1W2PQU0 124 aa15.59■□□□□ 0.09
LIMS3-203ENST00000480744 TRABD2BA6NFA1 517 aa15.59■□□□□ 0.09
LIMS3-203ENST00000480744 PRAMEF26H0Y7S4 382 aa15.59■□□□□ 0.09
LIMS3-203ENST00000480744 MAGEC1O60732 1142 aa15.59■□□□□ 0.09
LIMS3-203ENST00000480744 SDC3O75056 442 aa15.59■□□□□ 0.09
LIMS3-203ENST00000480744 RFPL3O75679 317 aa15.59■□□□□ 0.09
LIMS3-203ENST00000480744 PRNPP04156 253 aa15.59■□□□□ 0.09
LIMS3-203ENST00000480744 TPM2P07951 284 aa15.59■□□□□ 0.09
LIMS3-203ENST00000480744 PRLRP16471 622 aa15.59■□□□□ 0.09
LIMS3-203ENST00000480744 KLK7P49862 253 aa15.59■□□□□ 0.09
LIMS3-203ENST00000480744 DNA2P51530 1060 aa15.59■□□□□ 0.09
LIMS3-203ENST00000480744 CLCN6P51797 869 aa15.59■□□□□ 0.09
LIMS3-203ENST00000480744 CLDN6P56747 220 aa15.59■□□□□ 0.09
LIMS3-203ENST00000480744 TAS2R38P59533 333 aa15.59■□□□□ 0.09
LIMS3-203ENST00000480744 CCDC15Q0P6D6 951 aa15.59■□□□□ 0.09
LIMS3-203ENST00000480744 SMAD1Q15797 465 aaKnown RBP15.59■□□□□ 0.09
LIMS3-203ENST00000480744 CDO1Q16878 200 aa15.59■□□□□ 0.09
LIMS3-203ENST00000480744 ACBD5Q5T8D3 534 aaPredicted RBP15.59■□□□□ 0.09
LIMS3-203ENST00000480744 HAPLN3Q96S86 360 aa15.59■□□□□ 0.09
LIMS3-203ENST00000480744 ZYG11BQ9C0D3 744 aa15.59■□□□□ 0.09
LIMS3-203ENST00000480744 GANQ9H2C0 597 aa15.59■□□□□ 0.09
LIMS3-203ENST00000480744 ERVMER34-1Q9H9K5 563 aa15.59■□□□□ 0.09
LIMS3-203ENST00000480744 ATP13A1Q9HD20 1204 aa15.59■□□□□ 0.09
LIMS3-203ENST00000480744 NLRC4Q9NPP4 1024 aa15.59■□□□□ 0.09
LIMS3-203ENST00000480744 FAM207AQ9NSI2 230 aaPredicted RBP15.59■□□□□ 0.09
LIMS3-203ENST00000480744 TMEM51Q9NW97 253 aa15.59■□□□□ 0.09
LIMS3-203ENST00000480744 IL36AQ9UHA7 158 aa15.59■□□□□ 0.09
LIMS3-203ENST00000480744 TMEM59LQ9UK28 342 aa15.59■□□□□ 0.09
LIMS3-203ENST00000480744 RAXQ9Y2V3 346 aa15.59■□□□□ 0.09
LIMS3-203ENST00000480744 KNTC1P50748 2209 aa15.59■□□□□ 0.09
LIMS3-203ENST00000480744 CACNA1GO43497 2377 aa15.58■□□□□ 0.09
LIMS3-203ENST00000480744 IGLV3-10A0A075B6K4 115 aa15.58■□□□□ 0.08
LIMS3-203ENST00000480744 ILVBLA1L0T0 632 aa15.58■□□□□ 0.08
LIMS3-203ENST00000480744 PCDH8O95206 1070 aa15.58■□□□□ 0.08
LIMS3-203ENST00000480744 POLR2FP61218 127 aaKnown RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms