RNA–Protein interactions for RNA: ENST00000480237.1

LINC00173-203, long intergenic non-protein coding RNA 173, humanhuman

TSL 2 BASIC

Gene LINC00173, Length 1,597 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-203ENST00000480237 CHST9Q7L1S5 443 aa10.66□□□□□ -0.7
LINC00173-203ENST00000480237 LRRC49Q8IUZ0 686 aa10.66□□□□□ -0.7
LINC00173-203ENST00000480237 ZBED8Q8IZ13 594 aa10.66□□□□□ -0.7
LINC00173-203ENST00000480237 PDIK1LQ8N165 341 aa10.66□□□□□ -0.7
LINC00173-203ENST00000480237 KRT222Q8N1A0 295 aa10.66□□□□□ -0.7
LINC00173-203ENST00000480237 ADAMTS19Q8TE59 1207 aa10.66□□□□□ -0.7
LINC00173-203ENST00000480237 PPP2R3CQ969Q6 453 aa10.66□□□□□ -0.7
LINC00173-203ENST00000480237 TCEAL4Q96EI5 215 aa10.66□□□□□ -0.7
LINC00173-203ENST00000480237 MYEOVQ96EZ4 313 aa10.66□□□□□ -0.7
LINC00173-203ENST00000480237 C9orf72Q96LT7 481 aa10.66□□□□□ -0.7
LINC00173-203ENST00000480237 TTC25Q96NG3 672 aa10.66□□□□□ -0.7
LINC00173-203ENST00000480237 AGAP3Q96P47 875 aa10.66□□□□□ -0.7
LINC00173-203ENST00000480237 FRMD8Q9BZ67 464 aaPredicted RBP10.66□□□□□ -0.7
LINC00173-203ENST00000480237 PRKD2Q9BZL6 878 aa10.66□□□□□ -0.7
LINC00173-203ENST00000480237 GBA3Q9H227 469 aa10.66□□□□□ -0.7
LINC00173-203ENST00000480237 SEMA4AQ9H3S1 761 aa10.66□□□□□ -0.7
LINC00173-203ENST00000480237 NOL6Q9H6R4 1146 aaKnown RBP10.66□□□□□ -0.7
LINC00173-203ENST00000480237 MED4Q9NPJ6 270 aa10.66□□□□□ -0.7
LINC00173-203ENST00000480237 DNMT3BQ9UBC3 853 aaKnown RBP10.66□□□□□ -0.7
LINC00173-203ENST00000480237 IPO11Q9UI26 975 aaKnown RBP10.66□□□□□ -0.7
LINC00173-203ENST00000480237 TRHDEQ9UKU6 1024 aa10.66□□□□□ -0.7
LINC00173-203ENST00000480237 ZNF510Q9Y2H8 683 aa10.66□□□□□ -0.7
LINC00173-203ENST00000480237 CCDC195A0A1B0GUA6 201 aa10.65□□□□□ -0.7
LINC00173-203ENST00000480237 GOLGA6CA6NDK9 693 aa10.65□□□□□ -0.7
LINC00173-203ENST00000480237 EPOPA6NHQ4 379 aa10.65□□□□□ -0.7
LINC00173-203ENST00000480237 NRG2O14511 850 aaPredicted RBP10.65□□□□□ -0.7
LINC00173-203ENST00000480237 EIF3HO15372 352 aaKnown RBP eCLIP10.65□□□□□ -0.7
LINC00173-203ENST00000480237 RIPK2O43353 540 aa10.65□□□□□ -0.7
LINC00173-203ENST00000480237 OPA1O60313 960 aa10.65□□□□□ -0.7
LINC00173-203ENST00000480237 MAFKO60675 156 aa10.65□□□□□ -0.7
LINC00173-203ENST00000480237 CLDN11O75508 207 aa10.65□□□□□ -0.7
LINC00173-203ENST00000480237 BANF1O75531 89 aa10.65□□□□□ -0.7
LINC00173-203ENST00000480237 JCHAINP01591 159 aa10.65□□□□□ -0.7
LINC00173-203ENST00000480237 RHOCP08134 193 aa10.65□□□□□ -0.7
LINC00173-203ENST00000480237 POU2F2P09086 479 aa10.65□□□□□ -0.7
LINC00173-203ENST00000480237 GOLGA6DP0CG33 693 aa10.65□□□□□ -0.7
LINC00173-203ENST00000480237 CCNB1P14635 433 aa10.65□□□□□ -0.7
LINC00173-203ENST00000480237 NFKB1P19838 968 aa10.65□□□□□ -0.7
LINC00173-203ENST00000480237 MAGEA6P43360 314 aa10.65□□□□□ -0.7
LINC00173-203ENST00000480237 SGSHP51688 502 aa10.65□□□□□ -0.7
LINC00173-203ENST00000480237 YBEYP58557 167 aaPredicted RBP10.65□□□□□ -0.7
LINC00173-203ENST00000480237 NTHL1P78549 312 aa10.65□□□□□ -0.7
LINC00173-203ENST00000480237 SARNPP82979 210 aaKnown RBP10.65□□□□□ -0.7
LINC00173-203ENST00000480237 SLC5A9Q2M3M2 681 aa10.65□□□□□ -0.7
LINC00173-203ENST00000480237 PARP6Q2NL67 630 aa10.65□□□□□ -0.7
LINC00173-203ENST00000480237 BBS9Q3SYG4 887 aa10.65□□□□□ -0.7
LINC00173-203ENST00000480237 TEX44Q53QW1 395 aa10.65□□□□□ -0.7
LINC00173-203ENST00000480237 HP1BP3Q5SSJ5 553 aaPredicted RBP10.65□□□□□ -0.7
LINC00173-203ENST00000480237 LRIG3Q6UXM1 1119 aa10.65□□□□□ -0.7
LINC00173-203ENST00000480237 Q6ZNB5 142 aa10.65□□□□□ -0.7
LINC00173-203ENST00000480237 GRASPQ7Z6J2 395 aaPredicted RBP10.65□□□□□ -0.7
LINC00173-203ENST00000480237 TDHQ8IZJ6 230 aa10.65□□□□□ -0.7
LINC00173-203ENST00000480237 UHMK1Q8TAS1 419 aaKnown RBP10.65□□□□□ -0.7
LINC00173-203ENST00000480237 NSMCE1Q8WV22 266 aa10.65□□□□□ -0.7
LINC00173-203ENST00000480237 SMG7Q92540 1137 aaKnown RBP10.65□□□□□ -0.7
LINC00173-203ENST00000480237 SMG9Q9H0W8 520 aaKnown RBP10.65□□□□□ -0.7
LINC00173-203ENST00000480237 RETREG1Q9H6L5 497 aa10.65□□□□□ -0.7
LINC00173-203ENST00000480237 TASP1Q9H6P5 420 aa10.65□□□□□ -0.7
LINC00173-203ENST00000480237 SFXN1Q9H9B4 322 aa10.65□□□□□ -0.7
LINC00173-203ENST00000480237 EIF2B3Q9NR50 452 aaKnown RBP10.65□□□□□ -0.7
LINC00173-203ENST00000480237 GOLGA6AQ9NYA3 693 aa10.65□□□□□ -0.7
LINC00173-203ENST00000480237 NINJ2Q9NZG7 142 aa10.65□□□□□ -0.7
LINC00173-203ENST00000480237 IGSF9Q9P2J2 1179 aa10.65□□□□□ -0.7
LINC00173-203ENST00000480237 ZNF212Q9UDV6 495 aa10.65□□□□□ -0.7
LINC00173-203ENST00000480237 MUC22E2RYF6 1773 aaPredicted RBP10.65□□□□□ -0.7
LINC00173-203ENST00000480237 BPTFQ12830 3046 aa10.65□□□□□ -0.71
LINC00173-203ENST00000480237 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.65□□□□□ -0.71
LINC00173-203ENST00000480237 LEFTY2O00292 366 aa10.65□□□□□ -0.71
LINC00173-203ENST00000480237 ZNF197O14709 1029 aa10.65□□□□□ -0.71
LINC00173-203ENST00000480237 MATN3O15232 486 aa10.65□□□□□ -0.71
LINC00173-203ENST00000480237 ZBTB24O43167 697 aaPredicted RBP10.65□□□□□ -0.71
LINC00173-203ENST00000480237 TBL1XO60907 577 aa10.65□□□□□ -0.71
LINC00173-203ENST00000480237 OAS2P29728 719 aaKnown RBP10.65□□□□□ -0.71
LINC00173-203ENST00000480237 CTHP32929 405 aa10.65□□□□□ -0.71
LINC00173-203ENST00000480237 SLC19A1P41440 591 aa10.65□□□□□ -0.71
LINC00173-203ENST00000480237 EIF3BP55884 814 aaKnown RBP10.65□□□□□ -0.71
LINC00173-203ENST00000480237 ZNF177Q13360 481 aaPredicted RBP10.65□□□□□ -0.71
LINC00173-203ENST00000480237 MTM1Q13496 603 aa10.65□□□□□ -0.71
LINC00173-203ENST00000480237 SLC29A2Q14542 456 aa10.65□□□□□ -0.71
LINC00173-203ENST00000480237 PRPSAP1Q14558 356 aa10.65□□□□□ -0.71
LINC00173-203ENST00000480237 FASTKD3Q14CZ7 662 aaKnown RBP10.65□□□□□ -0.71
LINC00173-203ENST00000480237 DNAJC21Q5F1R6 531 aaKnown RBP10.65□□□□□ -0.71
LINC00173-203ENST00000480237 CEP85LQ5SZL2 805 aa10.65□□□□□ -0.71
LINC00173-203ENST00000480237 FNBP1LQ5T0N5 605 aa10.65□□□□□ -0.71
LINC00173-203ENST00000480237 C6orf118Q5T5N4 469 aa10.65□□□□□ -0.71
LINC00173-203ENST00000480237 ANKMY2Q8IV38 441 aa10.65□□□□□ -0.71
LINC00173-203ENST00000480237 CMTM8Q8IZV2 173 aa10.65□□□□□ -0.71
LINC00173-203ENST00000480237 IQCKQ8N0W5 287 aa10.65□□□□□ -0.71
LINC00173-203ENST00000480237 MCUQ8NE86 351 aa10.65□□□□□ -0.71
LINC00173-203ENST00000480237 OR2W6PQ8NHA6 318 aa10.65□□□□□ -0.71
LINC00173-203ENST00000480237 ING5Q8WYH8 240 aa10.65□□□□□ -0.71
LINC00173-203ENST00000480237 TIFAQ96CG3 184 aa10.65□□□□□ -0.71
LINC00173-203ENST00000480237 PABPC5Q96DU9 382 aaKnown RBP10.65□□□□□ -0.71
LINC00173-203ENST00000480237 SERPINB12Q96P63 405 aa10.65□□□□□ -0.71
LINC00173-203ENST00000480237 SLC46A2Q9BY10 475 aa10.65□□□□□ -0.71
LINC00173-203ENST00000480237 EPB41L4BQ9H329 900 aa10.65□□□□□ -0.71
LINC00173-203ENST00000480237 XAB2Q9HCS7 855 aaKnown RBP10.65□□□□□ -0.71
LINC00173-203ENST00000480237 DZANK1Q9NVP4 752 aa10.65□□□□□ -0.71
LINC00173-203ENST00000480237 OGFRQ9NZT2 677 aa10.65□□□□□ -0.71
LINC00173-203ENST00000480237 ZMYM5Q9UJ78 669 aa10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms