RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 CASKIN2Q8WXE0 1202 aa11.06□□□□□ -0.64
ATG4B-219ENST00000479941 PRCCQ92733 491 aaPredicted RBP11.06□□□□□ -0.64
ATG4B-219ENST00000479941 PTPRN2Q92932 1015 aa11.06□□□□□ -0.64
ATG4B-219ENST00000479941 FAF2Q96CS3 445 aa11.06□□□□□ -0.64
ATG4B-219ENST00000479941 SIPA1Q96FS4 1042 aa11.06□□□□□ -0.64
ATG4B-219ENST00000479941 HMCESQ96FZ2 354 aa11.06□□□□□ -0.64
ATG4B-219ENST00000479941 CELF6Q96J87 481 aaKnown RBP11.06□□□□□ -0.64
ATG4B-219ENST00000479941 PDLIM2Q96JY6 352 aa11.06□□□□□ -0.64
ATG4B-219ENST00000479941 CCDC114Q96M63 670 aa11.06□□□□□ -0.64
ATG4B-219ENST00000479941 TPSD1Q9BZJ3 242 aa11.06□□□□□ -0.64
ATG4B-219ENST00000479941 CEP44Q9C0F1 390 aa11.06□□□□□ -0.64
ATG4B-219ENST00000479941 SLC39A8Q9C0K1 460 aa11.06□□□□□ -0.64
ATG4B-219ENST00000479941 MKRN2Q9H000 416 aaKnown RBP11.06□□□□□ -0.64
ATG4B-219ENST00000479941 KLC2Q9H0B6 622 aa11.06□□□□□ -0.64
ATG4B-219ENST00000479941 PRDM16Q9HAZ2 1276 aa11.06□□□□□ -0.64
ATG4B-219ENST00000479941 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.06□□□□□ -0.64
ATG4B-219ENST00000479941 HYOU1Q9Y4L1 999 aa11.06□□□□□ -0.64
ATG4B-219ENST00000479941 R4GN57 208 aa11.06□□□□□ -0.64
ATG4B-219ENST00000479941 CHD5Q8TDI0 1954 aa11.06□□□□□ -0.64
ATG4B-219ENST00000479941 CKAP5Q14008 2032 aa11.06□□□□□ -0.64
ATG4B-219ENST00000479941 LRRD1A4D1F6 860 aa11.05□□□□□ -0.64
ATG4B-219ENST00000479941 ALOX15BO15296 676 aa11.05□□□□□ -0.64
ATG4B-219ENST00000479941 RPP40O75818 363 aaKnown RBP11.05□□□□□ -0.64
ATG4B-219ENST00000479941 CD160O95971 181 aa11.05□□□□□ -0.64
ATG4B-219ENST00000479941 ACADMP11310 421 aa11.05□□□□□ -0.64
ATG4B-219ENST00000479941 TNNT1P13805 278 aa11.05□□□□□ -0.64
ATG4B-219ENST00000479941 PAPOLAP51003 745 aaKnown RBP11.05□□□□□ -0.64
ATG4B-219ENST00000479941 NHLH1Q02575 133 aa11.05□□□□□ -0.64
ATG4B-219ENST00000479941 SFSWAPQ12872 951 aaKnown RBP11.05□□□□□ -0.64
ATG4B-219ENST00000479941 MMRN1Q13201 1228 aa11.05□□□□□ -0.64
ATG4B-219ENST00000479941 ELAVL3Q14576 367 aaKnown RBP11.05□□□□□ -0.64
ATG4B-219ENST00000479941 ZNF776Q68DI1 518 aaPredicted RBP11.05□□□□□ -0.64
ATG4B-219ENST00000479941 ARHGAP12Q8IWW6 846 aa11.05□□□□□ -0.64
ATG4B-219ENST00000479941 SYCE1Q8N0S2 351 aa11.05□□□□□ -0.64
ATG4B-219ENST00000479941 NPWQ8N729 165 aa11.05□□□□□ -0.64
ATG4B-219ENST00000479941 PCDH19Q8TAB3 1148 aa11.05□□□□□ -0.64
ATG4B-219ENST00000479941 GAB3Q8WWW8 586 aa11.05□□□□□ -0.64
ATG4B-219ENST00000479941 RAPGEF5Q92565 580 aa11.05□□□□□ -0.64
ATG4B-219ENST00000479941 ISG20Q96AZ6 181 aaKnown RBP11.05□□□□□ -0.64
ATG4B-219ENST00000479941 ERLEC1Q96DZ1 483 aa11.05□□□□□ -0.64
ATG4B-219ENST00000479941 RSPH9Q9H1X1 276 aaPredicted RBP11.05□□□□□ -0.64
ATG4B-219ENST00000479941 GOLPH3Q9H4A6 298 aa11.05□□□□□ -0.64
ATG4B-219ENST00000479941 MTG2Q9H4K7 406 aa11.05□□□□□ -0.64
ATG4B-219ENST00000479941 ETNK2Q9NVF9 386 aa11.05□□□□□ -0.64
ATG4B-219ENST00000479941 FAM86C1Q9NVL1 165 aa11.05□□□□□ -0.64
ATG4B-219ENST00000479941 KLHL11Q9NVR0 708 aa11.05□□□□□ -0.64
ATG4B-219ENST00000479941 SCML1Q9UN30 329 aa11.05□□□□□ -0.64
ATG4B-219ENST00000479941 FARP1Q9Y4F1 1045 aaPredicted RBP11.05□□□□□ -0.64
ATG4B-219ENST00000479941 MACROD2A1Z1Q3 448 aa11.04□□□□□ -0.64
ATG4B-219ENST00000479941 PROB1E7EW31 1015 aa11.04□□□□□ -0.64
ATG4B-219ENST00000479941 K7ERQ8 282 aa11.04□□□□□ -0.64
ATG4B-219ENST00000479941 DFFAO00273 331 aa11.04□□□□□ -0.64
ATG4B-219ENST00000479941 MCF2LO15068 1137 aa11.04□□□□□ -0.64
ATG4B-219ENST00000479941 SMAD6O43541 496 aaKnown RBP11.04□□□□□ -0.64
ATG4B-219ENST00000479941 HRO43593 1189 aa11.04□□□□□ -0.64
ATG4B-219ENST00000479941 PRAMEF11O60813 436 aa11.04□□□□□ -0.64
ATG4B-219ENST00000479941 DNTTP04053 509 aa11.04□□□□□ -0.64
ATG4B-219ENST00000479941 KRT1P04264 644 aa11.04□□□□□ -0.64
ATG4B-219ENST00000479941 PTMAP06454 111 aaKnown RBP11.04□□□□□ -0.64
ATG4B-219ENST00000479941 P2RY2P41231 377 aa11.04□□□□□ -0.64
ATG4B-219ENST00000479941 RECQLP46063 649 aaPredicted RBP11.04□□□□□ -0.64
ATG4B-219ENST00000479941 PAFAH1B3Q15102 231 aaKnown RBP11.04□□□□□ -0.64
ATG4B-219ENST00000479941 MAP7D1Q3KQU3 841 aa11.04□□□□□ -0.64
ATG4B-219ENST00000479941 NCBP2-AS2Q69YL0 99 aa11.04□□□□□ -0.64
ATG4B-219ENST00000479941 C22orf39Q6P5X5 142 aa11.04□□□□□ -0.64
ATG4B-219ENST00000479941 KIAA1324Q6UXG2 1013 aaKnown RBP11.04□□□□□ -0.64
ATG4B-219ENST00000479941 ZNF662Q6ZS27 426 aa11.04□□□□□ -0.64
ATG4B-219ENST00000479941 Q6ZVU0 165 aa11.04□□□□□ -0.64
ATG4B-219ENST00000479941 DSG4Q86SJ6 1040 aa11.04□□□□□ -0.64
ATG4B-219ENST00000479941 LRRC49Q8IUZ0 686 aa11.04□□□□□ -0.64
ATG4B-219ENST00000479941 PLPP6Q8IY26 295 aa11.04□□□□□ -0.64
ATG4B-219ENST00000479941 KATNAL2Q8IYT4 538 aa11.04□□□□□ -0.64
ATG4B-219ENST00000479941 PCDH20Q8N6Y1 951 aaKnown RBP11.04□□□□□ -0.64
ATG4B-219ENST00000479941 LRRC57Q8N9N7 239 aa11.04□□□□□ -0.64
ATG4B-219ENST00000479941 UBE2Q2Q8WVN8 375 aa11.04□□□□□ -0.64
ATG4B-219ENST00000479941 OR8D1Q8WZ84 308 aa11.04□□□□□ -0.64
ATG4B-219ENST00000479941 SPACA7Q96KW9 195 aa11.04□□□□□ -0.64
ATG4B-219ENST00000479941 RNF157Q96PX1 679 aa11.04□□□□□ -0.64
ATG4B-219ENST00000479941 MAK16Q9BXY0 300 aaKnown RBP11.04□□□□□ -0.64
ATG4B-219ENST00000479941 SLC6A17Q9H1V8 727 aa11.04□□□□□ -0.64
ATG4B-219ENST00000479941 EPC1Q9H2F5 836 aa11.04□□□□□ -0.64
ATG4B-219ENST00000479941 ITM2CQ9NQX7 267 aa11.04□□□□□ -0.64
ATG4B-219ENST00000479941 PIEZO1Q92508 2521 aa11.04□□□□□ -0.64
ATG4B-219ENST00000479941 FANCMQ8IYD8 2048 aa11.04□□□□□ -0.64
ATG4B-219ENST00000479941 NUP205Q92621 2012 aa11.03□□□□□ -0.64
ATG4B-219ENST00000479941 A0A0U1RQJ8 604 aa11.03□□□□□ -0.64
ATG4B-219ENST00000479941 CCDC66A2RUB6 948 aa11.03□□□□□ -0.64
ATG4B-219ENST00000479941 GRID2IPA4D2P6 1211 aa11.03□□□□□ -0.64
ATG4B-219ENST00000479941 C3orf70A6NLC5 250 aaPredicted RBP11.03□□□□□ -0.64
ATG4B-219ENST00000479941 J3KR12 359 aa11.03□□□□□ -0.64
ATG4B-219ENST00000479941 ZNF821O75541 412 aaPredicted RBP11.03□□□□□ -0.64
ATG4B-219ENST00000479941 PALMO75781 387 aa11.03□□□□□ -0.64
ATG4B-219ENST00000479941 ZRANB2O95218 330 aaKnown RBP eCLIP11.03□□□□□ -0.64
ATG4B-219ENST00000479941 ADH1BP00325 375 aa11.03□□□□□ -0.64
ATG4B-219ENST00000479941 VAV1P15498 845 aa11.03□□□□□ -0.64
ATG4B-219ENST00000479941 ZFXP17010 805 aaPredicted RBP11.03□□□□□ -0.64
ATG4B-219ENST00000479941 OXTRP30559 389 aa11.03□□□□□ -0.64
ATG4B-219ENST00000479941 CTNNA1P35221 906 aaKnown RBP11.03□□□□□ -0.64
ATG4B-219ENST00000479941 RPS14P62263 151 aaKnown RBP11.03□□□□□ -0.64
ATG4B-219ENST00000479941 IL10RBQ08334 325 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms