RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 PCYOX1Q9UHG3 505 aa12.8□□□□□ -0.36
TRAPPC12-218ENST00000479897 MYO18AQ92614 2054 aaKnown RBP12.79□□□□□ -0.36
TRAPPC12-218ENST00000479897 H7C0C1 242 aa12.79□□□□□ -0.36
TRAPPC12-218ENST00000479897 J3KR12 359 aa12.79□□□□□ -0.36
TRAPPC12-218ENST00000479897 CBX4O00257 560 aa12.79□□□□□ -0.36
TRAPPC12-218ENST00000479897 ATP5BP06576 529 aaKnown RBP12.79□□□□□ -0.36
TRAPPC12-218ENST00000479897 DLDP09622 509 aaKnown RBP12.79□□□□□ -0.36
TRAPPC12-218ENST00000479897 GLDCP23378 1020 aa12.79□□□□□ -0.36
TRAPPC12-218ENST00000479897 STIP1P31948 543 aaKnown RBP12.79□□□□□ -0.36
TRAPPC12-218ENST00000479897 COILP38432 576 aaPredicted RBP12.79□□□□□ -0.36
TRAPPC12-218ENST00000479897 ATP5OP48047 213 aa12.79□□□□□ -0.36
TRAPPC12-218ENST00000479897 SERPINH1P50454 418 aaKnown RBP12.79□□□□□ -0.36
TRAPPC12-218ENST00000479897 GALK1P51570 392 aa12.79□□□□□ -0.36
TRAPPC12-218ENST00000479897 STARD6P59095 220 aa12.79□□□□□ -0.36
TRAPPC12-218ENST00000479897 ECT2LQ008S8 904 aa12.79□□□□□ -0.36
TRAPPC12-218ENST00000479897 LMNB2Q03252 620 aa12.79□□□□□ -0.36
TRAPPC12-218ENST00000479897 IER5LQ5T953 404 aa12.79□□□□□ -0.36
TRAPPC12-218ENST00000479897 ALG1LQ6GMV1 187 aa12.79□□□□□ -0.36
TRAPPC12-218ENST00000479897 FSTL4Q6MZW2 842 aa12.79□□□□□ -0.36
TRAPPC12-218ENST00000479897 TPRG1Q6ZUI0 275 aa12.79□□□□□ -0.36
TRAPPC12-218ENST00000479897 ZNF354CQ86Y25 554 aa12.79□□□□□ -0.36
TRAPPC12-218ENST00000479897 TEX26Q8N6G2 289 aa12.79□□□□□ -0.36
TRAPPC12-218ENST00000479897 CCNYQ8ND76 341 aa12.79□□□□□ -0.36
TRAPPC12-218ENST00000479897 KCNV2Q8TDN2 545 aa12.79□□□□□ -0.36
TRAPPC12-218ENST00000479897 GRK7Q8WTQ7 553 aa12.79□□□□□ -0.36
TRAPPC12-218ENST00000479897 UCMAQ8WVF2 138 aa12.79□□□□□ -0.36
TRAPPC12-218ENST00000479897 HTR3CQ8WXA8 447 aa12.79□□□□□ -0.36
TRAPPC12-218ENST00000479897 EZH1Q92800 747 aaPredicted RBP12.79□□□□□ -0.36
TRAPPC12-218ENST00000479897 MAGOHBQ96A72 148 aaKnown RBP12.79□□□□□ -0.36
TRAPPC12-218ENST00000479897 MYO19Q96H55 970 aa12.79□□□□□ -0.36
TRAPPC12-218ENST00000479897 MRGPRX3Q96LB0 322 aa12.79□□□□□ -0.36
TRAPPC12-218ENST00000479897 IL12RB2Q99665 862 aa12.79□□□□□ -0.36
TRAPPC12-218ENST00000479897 FAM118BQ9BPY3 351 aa12.79□□□□□ -0.36
TRAPPC12-218ENST00000479897 SPON2Q9BUD6 331 aa12.79□□□□□ -0.36
TRAPPC12-218ENST00000479897 USP29Q9HBJ7 922 aa12.79□□□□□ -0.36
TRAPPC12-218ENST00000479897 CD320Q9NPF0 282 aa12.79□□□□□ -0.36
TRAPPC12-218ENST00000479897 RBM12Q9NTZ6 932 aaKnown RBP12.79□□□□□ -0.36
TRAPPC12-218ENST00000479897 UBA2Q9UBT2 640 aaPredicted RBP12.79□□□□□ -0.36
TRAPPC12-218ENST00000479897 SLC25A13Q9UJS0 675 aa12.79□□□□□ -0.36
TRAPPC12-218ENST00000479897 TBC1D3BA6NDS4 549 aa12.78□□□□□ -0.36
TRAPPC12-218ENST00000479897 ATP9BO43861 1147 aa12.78□□□□□ -0.36
TRAPPC12-218ENST00000479897 SRCP12931 536 aa12.78□□□□□ -0.36
TRAPPC12-218ENST00000479897 HNRNPLP14866 589 aaKnown RBP eCLIP12.78□□□□□ -0.362e-11■■■■□ 19.4
TRAPPC12-218ENST00000479897 PTPN3P26045 913 aa12.78□□□□□ -0.36
TRAPPC12-218ENST00000479897 RBL1P28749 1068 aa12.78□□□□□ -0.36
TRAPPC12-218ENST00000479897 HSPA9P38646 679 aaKnown RBP12.78□□□□□ -0.36
TRAPPC12-218ENST00000479897 RENBPP51606 427 aa12.78□□□□□ -0.36
TRAPPC12-218ENST00000479897 AP1B1Q10567 949 aa12.78□□□□□ -0.36
TRAPPC12-218ENST00000479897 WASHC5Q12768 1159 aa12.78□□□□□ -0.36
TRAPPC12-218ENST00000479897 GRSF1Q12849 480 aaKnown RBP eCLIP12.78□□□□□ -0.36
TRAPPC12-218ENST00000479897 ENPP2Q13822 863 aa12.78□□□□□ -0.36
TRAPPC12-218ENST00000479897 CCINQ13939 588 aa12.78□□□□□ -0.36
TRAPPC12-218ENST00000479897 LBRQ14739 615 aaKnown RBP12.78□□□□□ -0.36
TRAPPC12-218ENST00000479897 PON2Q15165 354 aa12.78□□□□□ -0.36
TRAPPC12-218ENST00000479897 PTPRNQ16849 979 aa12.78□□□□□ -0.36
TRAPPC12-218ENST00000479897 FBXO43Q4G163 708 aa12.78□□□□□ -0.36
TRAPPC12-218ENST00000479897 TTC27Q6P3X3 843 aa12.78□□□□□ -0.36
TRAPPC12-218ENST00000479897 DARS2Q6PI48 645 aaKnown RBP12.78□□□□□ -0.36
TRAPPC12-218ENST00000479897 CCDC137Q6PK04 289 aaKnown RBP12.78□□□□□ -0.36
TRAPPC12-218ENST00000479897 ZNF687Q8N1G0 1237 aa12.78□□□□□ -0.36
TRAPPC12-218ENST00000479897 SH2D3CQ8N5H7 860 aa12.78□□□□□ -0.36
TRAPPC12-218ENST00000479897 CCDC33Q8N5R6 958 aa12.78□□□□□ -0.36
TRAPPC12-218ENST00000479897 ALLCQ8N6M5 410 aa12.78□□□□□ -0.36
TRAPPC12-218ENST00000479897 ATL2Q8NHH9 583 aa12.78□□□□□ -0.36
TRAPPC12-218ENST00000479897 CCDC26Q8TAB7 109 aa12.78□□□□□ -0.36
TRAPPC12-218ENST00000479897 NSMCE1Q8WV22 266 aa12.78□□□□□ -0.36
TRAPPC12-218ENST00000479897 FAM3CQ92520 227 aa12.78□□□□□ -0.36
TRAPPC12-218ENST00000479897 ISG20Q96AZ6 181 aaKnown RBP12.78□□□□□ -0.36
TRAPPC12-218ENST00000479897 ZNF419Q96HQ0 510 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC12-218ENST00000479897 SHDQ96IW2 340 aa12.78□□□□□ -0.36
TRAPPC12-218ENST00000479897 CIPCQ9C0C6 399 aa12.78□□□□□ -0.36
TRAPPC12-218ENST00000479897 CEP44Q9C0F1 390 aa12.78□□□□□ -0.36
TRAPPC12-218ENST00000479897 DDX47Q9H0S4 455 aaKnown RBP12.78□□□□□ -0.36
TRAPPC12-218ENST00000479897 FBRSL1Q9HCM7 1045 aaKnown RBP12.78□□□□□ -0.36
TRAPPC12-218ENST00000479897 HAUS2Q9NVX0 235 aa12.78□□□□□ -0.36
TRAPPC12-218ENST00000479897 THAP10Q9P2Z0 257 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC12-218ENST00000479897 FEZ2Q9UHY8 353 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC12-218ENST00000479897 MUTYHQ9UIF7 546 aa12.78□□□□□ -0.36
TRAPPC12-218ENST00000479897 ERVW-1Q9UQF0 538 aa12.78□□□□□ -0.36
TRAPPC12-218ENST00000479897 CTAGE15A4D2H0 777 aa12.77□□□□□ -0.37
TRAPPC12-218ENST00000479897 KRBA1A5PL33 1030 aa12.77□□□□□ -0.37
TRAPPC12-218ENST00000479897 C5orf60A6NFR6 353 aa12.77□□□□□ -0.37
TRAPPC12-218ENST00000479897 K7EQS6 105 aa12.77□□□□□ -0.37
TRAPPC12-218ENST00000479897 KCNN4O15554 427 aa12.77□□□□□ -0.37
TRAPPC12-218ENST00000479897 OPHN1O60890 802 aa12.77□□□□□ -0.37
TRAPPC12-218ENST00000479897 STK10O94804 968 aaKnown RBP12.77□□□□□ -0.37
TRAPPC12-218ENST00000479897 TMCC1O94876 653 aa12.77□□□□□ -0.37
TRAPPC12-218ENST00000479897 CTAGE8P0CG41 777 aa12.77□□□□□ -0.37
TRAPPC12-218ENST00000479897 CCNB1P14635 433 aa12.77□□□□□ -0.37
TRAPPC12-218ENST00000479897 CTSOP43234 321 aaPredicted RBP12.77□□□□□ -0.37
TRAPPC12-218ENST00000479897 KIR2DL1P43626 348 aaPredicted RBP12.77□□□□□ -0.37
TRAPPC12-218ENST00000479897 ZBTB17Q13105 803 aa12.77□□□□□ -0.37
TRAPPC12-218ENST00000479897 DHX34Q14147 1143 aaKnown RBP12.77□□□□□ -0.37
TRAPPC12-218ENST00000479897 P3H1Q32P28 736 aa12.77□□□□□ -0.37
TRAPPC12-218ENST00000479897 HSF5Q4G112 596 aaPredicted RBP12.77□□□□□ -0.37
TRAPPC12-218ENST00000479897 TEX44Q53QW1 395 aa12.77□□□□□ -0.37
TRAPPC12-218ENST00000479897 MARC1Q5VT66 337 aa12.77□□□□□ -0.37
TRAPPC12-218ENST00000479897 ZNF852Q6ZMS4 543 aa12.77□□□□□ -0.37
TRAPPC12-218ENST00000479897 CTAGE6Q86UF2 777 aa12.77□□□□□ -0.37
TRAPPC12-218ENST00000479897 CTAGE4Q8IX94 777 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms