RNA–Protein interactions for RNA: ENST00000479003.5

CHKB-208, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-208ENST00000479003 RFC2P35250 354 aa28.05■■■□□ 2.08
CHKB-208ENST00000479003 TMEM173Q86WV6 379 aaPredicted RBP28.05■■■□□ 2.08
CHKB-208ENST00000479003 THEM5Q8N1Q8 247 aa28.05■■■□□ 2.08
CHKB-208ENST00000479003 RILPQ96NA2 401 aa28.05■■■□□ 2.08
CHKB-208ENST00000479003 BRD8Q9H0E9 1235 aa28.05■■■□□ 2.08
CHKB-208ENST00000479003 STOML1Q9UBI4 398 aa28.05■■■□□ 2.08
CHKB-208ENST00000479003 DNAJC16Q9Y2G8 782 aa28.05■■■□□ 2.08
CHKB-208ENST00000479003 LYPLA1O75608 230 aaPredicted RBP28.04■■■□□ 2.08
CHKB-208ENST00000479003 AMHP03971 560 aa28.04■■■□□ 2.08
CHKB-208ENST00000479003 KCNA4P22459 653 aa28.04■■■□□ 2.08
CHKB-208ENST00000479003 MAGEA12P43365 314 aa28.04■■■□□ 2.08
CHKB-208ENST00000479003 OLIG2Q13516 323 aa28.04■■■□□ 2.08
CHKB-208ENST00000479003 GPRIN1Q7Z2K8 1008 aa28.04■■■□□ 2.08
CHKB-208ENST00000479003 TMCO2Q7Z6W1 182 aaPredicted RBP28.04■■■□□ 2.08
CHKB-208ENST00000479003 GPR62Q9BZJ7 368 aa28.04■■■□□ 2.08
CHKB-208ENST00000479003 CASS4Q9NQ75 786 aa28.04■■■□□ 2.08
CHKB-208ENST00000479003 IL1RAPL1Q9NZN1 696 aa28.04■■■□□ 2.08
CHKB-208ENST00000479003 LTBP2Q14767 1821 aa28.04■■■□□ 2.08
CHKB-208ENST00000479003 SPECC1L-ADORA2AF8WAN1 911 aa28.04■■■□□ 2.08
CHKB-208ENST00000479003 ALDH2P05091 517 aa28.04■■■□□ 2.08
CHKB-208ENST00000479003 TYK2P29597 1187 aa28.04■■■□□ 2.08
CHKB-208ENST00000479003 ALDH18A1P54886 795 aaKnown RBP28.04■■■□□ 2.08
CHKB-208ENST00000479003 KCTD11Q693B1 232 aa28.04■■■□□ 2.08
CHKB-208ENST00000479003 TMEM135Q86UB9 458 aa28.04■■■□□ 2.08
CHKB-208ENST00000479003 LRRC43Q8N309 656 aa28.04■■■□□ 2.08
CHKB-208ENST00000479003 WDR60Q8WVS4 1066 aa28.04■■■□□ 2.08
CHKB-208ENST00000479003 B3GALT6Q96L58 329 aa28.04■■■□□ 2.08
CHKB-208ENST00000479003 COL4A6Q14031 1691 aa28.03■■■□□ 2.08
CHKB-208ENST00000479003 KIAA0355O15063 1070 aa28.03■■■□□ 2.08
CHKB-208ENST00000479003 LTFP02788 710 aa28.03■■■□□ 2.08
CHKB-208ENST00000479003 OR4Q2P0C623 313 aa28.03■■■□□ 2.08
CHKB-208ENST00000479003 NCAM1P13591 858 aa28.03■■■□□ 2.08
CHKB-208ENST00000479003 GRK2P25098 689 aa28.03■■■□□ 2.08
CHKB-208ENST00000479003 TUBB3Q13509 450 aa28.03■■■□□ 2.08
CHKB-208ENST00000479003 PPM1JQ5JR12 505 aa28.03■■■□□ 2.08
CHKB-208ENST00000479003 NPWQ8N729 165 aa28.03■■■□□ 2.08
CHKB-208ENST00000479003 RBM15BQ8NDT2 890 aaKnown RBP28.03■■■□□ 2.08
CHKB-208ENST00000479003 HDAC11Q96DB2 347 aa28.03■■■□□ 2.08
CHKB-208ENST00000479003 SMARCD1Q96GM5 515 aa28.03■■■□□ 2.08
CHKB-208ENST00000479003 AGAP3Q96P47 875 aa28.03■■■□□ 2.08
CHKB-208ENST00000479003 RBBP8Q99708 897 aa28.03■■■□□ 2.08
CHKB-208ENST00000479003 RRN3Q9NYV6 651 aa28.03■■■□□ 2.08
CHKB-208ENST00000479003 BFARQ9NZS9 450 aa28.03■■■□□ 2.08
CHKB-208ENST00000479003 TMEM216Q9P0N5 145 aa28.03■■■□□ 2.08
CHKB-208ENST00000479003 VANGL2Q9ULK5 521 aa28.03■■■□□ 2.08
CHKB-208ENST00000479003 PLA2G4CQ9UP65 541 aa28.03■■■□□ 2.08
CHKB-208ENST00000479003 ERI2A8K979 691 aaKnown RBP28.03■■■□□ 2.08
CHKB-208ENST00000479003 MTSS1O43312 755 aa28.03■■■□□ 2.08
CHKB-208ENST00000479003 LUC7L3O95232 432 aaKnown RBP28.03■■■□□ 2.08
CHKB-208ENST00000479003 PSMG1O95456 288 aa28.03■■■□□ 2.08
CHKB-208ENST00000479003 GALTP07902 379 aa28.03■■■□□ 2.08
CHKB-208ENST00000479003 RAG1P15918 1043 aa28.03■■■□□ 2.08
CHKB-208ENST00000479003 BDNFP23560 247 aa28.03■■■□□ 2.08
CHKB-208ENST00000479003 ARL13BQ3SXY8 428 aa28.03■■■□□ 2.08
CHKB-208ENST00000479003 SERBP1Q8NC51 408 aaKnown RBP eCLIP28.03■■■□□ 2.08
CHKB-208ENST00000479003 FBXO27Q8NI29 283 aa28.03■■■□□ 2.08
CHKB-208ENST00000479003 ZNF669Q96BR6 464 aaPredicted RBP28.03■■■□□ 2.08
CHKB-208ENST00000479003 COPG2Q9UBF2 871 aa28.03■■■□□ 2.08
CHKB-208ENST00000479003 NLRC5Q86WI3 1866 aa28.03■■■□□ 2.08
CHKB-208ENST00000479003 KRT36O76013 467 aa28.02■■■□□ 2.08
CHKB-208ENST00000479003 USP1O94782 785 aa28.02■■■□□ 2.08
CHKB-208ENST00000479003 OAZ2O95190 189 aa28.02■■■□□ 2.08
CHKB-208ENST00000479003 USP17L7P0C7H9 530 aa28.02■■■□□ 2.08
CHKB-208ENST00000479003 TSPY1Q01534 308 aa28.02■■■□□ 2.08
CHKB-208ENST00000479003 RCN2Q14257 317 aa28.02■■■□□ 2.08
CHKB-208ENST00000479003 RCN1Q15293 331 aa28.02■■■□□ 2.08
CHKB-208ENST00000479003 FAM171A1Q5VUB5 890 aa28.02■■■□□ 2.08
CHKB-208ENST00000479003 C10orf107Q8IVU9 208 aa28.02■■■□□ 2.08
CHKB-208ENST00000479003 MIEF2Q96C03 454 aa28.02■■■□□ 2.08
CHKB-208ENST00000479003 GBA3Q9H227 469 aa28.02■■■□□ 2.08
CHKB-208ENST00000479003 SNX15Q9NRS6 342 aa28.02■■■□□ 2.08
CHKB-208ENST00000479003 DDIT4Q9NX09 232 aa28.02■■■□□ 2.08
CHKB-208ENST00000479003 PRR5-ARHGAP8B1AHC4 643 aa28.01■■■□□ 2.08
CHKB-208ENST00000479003 HHLA1C9JL84 531 aa28.01■■■□□ 2.08
CHKB-208ENST00000479003 ZBTB24O43167 697 aaPredicted RBP28.01■■■□□ 2.08
CHKB-208ENST00000479003 USP12O75317 370 aa28.01■■■□□ 2.08
CHKB-208ENST00000479003 CD68P34810 354 aaPredicted RBP28.01■■■□□ 2.08
CHKB-208ENST00000479003 SPRP35270 261 aaPredicted RBP28.01■■■□□ 2.08
CHKB-208ENST00000479003 ARHGAP8P85298 464 aa28.01■■■□□ 2.08
CHKB-208ENST00000479003 SMAD1Q15797 465 aaKnown RBP28.01■■■□□ 2.08
CHKB-208ENST00000479003 KIRREL3Q8IZU9 778 aa28.01■■■□□ 2.08
CHKB-208ENST00000479003 DCLK2Q8N568 766 aa28.01■■■□□ 2.08
CHKB-208ENST00000479003 BCL7CQ8WUZ0 217 aaPredicted RBP28.01■■■□□ 2.08
CHKB-208ENST00000479003 COLEC11Q9BWP8 271 aa28.01■■■□□ 2.08
CHKB-208ENST00000479003 TRHDEQ9UKU6 1024 aa28.01■■■□□ 2.08
CHKB-208ENST00000479003 PTPRDP23468 1912 aa28.01■■■□□ 2.07
CHKB-208ENST00000479003 ZCWPW2A0A1B0GU75 182 aa28.01■■■□□ 2.07
CHKB-208ENST00000479003 AOC1P19801 751 aa28.01■■■□□ 2.07
CHKB-208ENST00000479003 MX2P20592 715 aa28.01■■■□□ 2.07
CHKB-208ENST00000479003 ATP6V1C1P21283 382 aa28.01■■■□□ 2.07
CHKB-208ENST00000479003 ZNF135P52742 658 aaPredicted RBP28.01■■■□□ 2.07
CHKB-208ENST00000479003 LIMK2P53671 638 aa28.01■■■□□ 2.07
CHKB-208ENST00000479003 DEFB103AP81534 67 aa28.01■■■□□ 2.07
CHKB-208ENST00000479003 GALNT2Q10471 571 aa28.01■■■□□ 2.07
CHKB-208ENST00000479003 CCDC153Q494R4 210 aa28.01■■■□□ 2.07
CHKB-208ENST00000479003 DNAL1Q4LDG9 190 aa28.01■■■□□ 2.07
CHKB-208ENST00000479003 VARS2Q5ST30 1063 aaKnown RBP28.01■■■□□ 2.07
CHKB-208ENST00000479003 BHLHA9Q7RTU4 235 aa28.01■■■□□ 2.07
CHKB-208ENST00000479003 PGLYRP2Q96PD5 576 aa28.01■■■□□ 2.07
CHKB-208ENST00000479003 SORT1Q99523 831 aa28.01■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms