RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 C1orf232A0A0U1RR37 186 aa12.88□□□□□ -0.35
RTFDC1-207ENST00000477573 TMEM150BA6NC51 233 aa12.88□□□□□ -0.35
RTFDC1-207ENST00000477573 ANKRD62A6NC57 917 aa12.88□□□□□ -0.35
RTFDC1-207ENST00000477573 EXTL3O43909 919 aa12.88□□□□□ -0.35
RTFDC1-207ENST00000477573 H2AFZP0C0S5 128 aa12.88□□□□□ -0.35
RTFDC1-207ENST00000477573 NCAM1P13591 858 aa12.88□□□□□ -0.35
RTFDC1-207ENST00000477573 ARL4CP56559 192 aa12.88□□□□□ -0.35
RTFDC1-207ENST00000477573 GNA12Q03113 381 aa12.88□□□□□ -0.35
RTFDC1-207ENST00000477573 NFATC3Q12968 1075 aa12.88□□□□□ -0.35
RTFDC1-207ENST00000477573 KCTD2Q14681 263 aa12.88□□□□□ -0.35
RTFDC1-207ENST00000477573 MAPRE1Q15691 268 aaKnown RBP12.88□□□□□ -0.35
RTFDC1-207ENST00000477573 C6orf52Q5T4I8 152 aa12.88□□□□□ -0.35
RTFDC1-207ENST00000477573 LDLRAD1Q5T700 205 aa12.88□□□□□ -0.35
RTFDC1-207ENST00000477573 UBE2UQ5VVX9 321 aa12.88□□□□□ -0.35
RTFDC1-207ENST00000477573 H2AFVQ71UI9 128 aa12.88□□□□□ -0.35
RTFDC1-207ENST00000477573 CCDC60Q8IWA6 550 aaPredicted RBP12.88□□□□□ -0.35
RTFDC1-207ENST00000477573 PRELID2Q8N945 189 aa12.88□□□□□ -0.35
RTFDC1-207ENST00000477573 OSBPL11Q9BXB4 747 aa12.88□□□□□ -0.35
RTFDC1-207ENST00000477573 EMILIN2Q9BXX0 1053 aa12.88□□□□□ -0.35
RTFDC1-207ENST00000477573 MROH8Q9H579 483 aa12.88□□□□□ -0.35
RTFDC1-207ENST00000477573 KMT5AQ9NQR1 393 aa12.88□□□□□ -0.35
RTFDC1-207ENST00000477573 ZNF302Q9NR11 478 aa12.88□□□□□ -0.35
RTFDC1-207ENST00000477573 CYP26B1Q9NR63 512 aa12.88□□□□□ -0.35
RTFDC1-207ENST00000477573 IGSF5Q9NSI5 407 aa12.88□□□□□ -0.35
RTFDC1-207ENST00000477573 NENFQ9UMX5 172 aa12.88□□□□□ -0.35
RTFDC1-207ENST00000477573 IGSF9BQ9UPX0 1349 aa12.88□□□□□ -0.35
RTFDC1-207ENST00000477573 ATP6V1G2-DDX39BF2Z307 99 aa12.88□□□□□ -0.35
RTFDC1-207ENST00000477573 SLC16A4O15374 487 aa12.88□□□□□ -0.35
RTFDC1-207ENST00000477573 RNGTTO60942 597 aaKnown RBP12.88□□□□□ -0.35
RTFDC1-207ENST00000477573 SPAG6O75602 509 aa12.88□□□□□ -0.35
RTFDC1-207ENST00000477573 FGF18O76093 207 aa12.88□□□□□ -0.35
RTFDC1-207ENST00000477573 ATG7O95352 703 aa12.88□□□□□ -0.35
RTFDC1-207ENST00000477573 SNRPAP09012 282 aaKnown RBP12.88□□□□□ -0.35
RTFDC1-207ENST00000477573 ICAM2P13598 275 aa12.88□□□□□ -0.35
RTFDC1-207ENST00000477573 UCHL3P15374 230 aa12.88□□□□□ -0.35
RTFDC1-207ENST00000477573 CD247P20963 164 aa12.88□□□□□ -0.35
RTFDC1-207ENST00000477573 TRIM23P36406 574 aa12.88□□□□□ -0.35
RTFDC1-207ENST00000477573 HCAR3P49019 387 aa12.88□□□□□ -0.35
RTFDC1-207ENST00000477573 BFSP1Q12934 665 aa12.88□□□□□ -0.35
RTFDC1-207ENST00000477573 PLA2G4EQ3MJ16 856 aa12.88□□□□□ -0.35
RTFDC1-207ENST00000477573 FAM47CQ5HY64 1035 aa12.88□□□□□ -0.35
RTFDC1-207ENST00000477573 KCNT1Q5JUK3 1230 aa12.88□□□□□ -0.35
RTFDC1-207ENST00000477573 IQSEC1Q6DN90 963 aa12.88□□□□□ -0.35
RTFDC1-207ENST00000477573 ERAP2Q6P179 960 aa12.88□□□□□ -0.35
RTFDC1-207ENST00000477573 ALKBH5Q6P6C2 394 aaKnown RBP12.88□□□□□ -0.35
RTFDC1-207ENST00000477573 ISLR2Q6UXK2 745 aa12.88□□□□□ -0.35
RTFDC1-207ENST00000477573 CARM1Q86X55 608 aa12.88□□□□□ -0.35
RTFDC1-207ENST00000477573 ZNF677Q86XU0 584 aa12.88□□□□□ -0.35
RTFDC1-207ENST00000477573 HERC6Q8IVU3 1022 aa12.88□□□□□ -0.35
RTFDC1-207ENST00000477573 XXYLT1Q8NBI6 393 aa12.88□□□□□ -0.35
RTFDC1-207ENST00000477573 CDRT15Q96T59 188 aa12.88□□□□□ -0.35
RTFDC1-207ENST00000477573 SH2D3AQ9BRG2 576 aa12.88□□□□□ -0.35
RTFDC1-207ENST00000477573 NTPCRQ9BSD7 190 aaKnown RBP12.88□□□□□ -0.35
RTFDC1-207ENST00000477573 EFHD1Q9BUP0 239 aa12.88□□□□□ -0.35
RTFDC1-207ENST00000477573 GPRC5CQ9NQ84 441 aa12.88□□□□□ -0.35
RTFDC1-207ENST00000477573 MRPL39Q9NYK5 338 aaKnown RBP12.88□□□□□ -0.35
RTFDC1-207ENST00000477573 SOWAHBA6NEL2 793 aa12.87□□□□□ -0.35
RTFDC1-207ENST00000477573 LRRIQ4A6NIV6 560 aa12.87□□□□□ -0.35
RTFDC1-207ENST00000477573 NCAM2O15394 837 aa12.87□□□□□ -0.35
RTFDC1-207ENST00000477573 CNMDO75829 334 aa12.87□□□□□ -0.35
RTFDC1-207ENST00000477573 BCL10O95999 233 aa12.87□□□□□ -0.35
RTFDC1-207ENST00000477573 KRT8P05787 483 aa12.87□□□□□ -0.35
RTFDC1-207ENST00000477573 MCF2P10911 925 aa12.87□□□□□ -0.35
RTFDC1-207ENST00000477573 MYL2P10916 166 aa12.87□□□□□ -0.35
RTFDC1-207ENST00000477573 GFAPP14136 432 aa12.87□□□□□ -0.35
RTFDC1-207ENST00000477573 SLC9A1P19634 815 aa12.87□□□□□ -0.35
RTFDC1-207ENST00000477573 NPTX2P47972 431 aa12.87□□□□□ -0.35
RTFDC1-207ENST00000477573 MAPKAPK2P49137 400 aa12.87□□□□□ -0.35
RTFDC1-207ENST00000477573 FMO5P49326 533 aa12.87□□□□□ -0.35
RTFDC1-207ENST00000477573 HERC3Q15034 1050 aa12.87□□□□□ -0.35
RTFDC1-207ENST00000477573 PDK1Q15118 436 aa12.87□□□□□ -0.35
RTFDC1-207ENST00000477573 INAVAQ3KP66 663 aa12.87□□□□□ -0.35
RTFDC1-207ENST00000477573 C4orf46Q504U0 113 aa12.87□□□□□ -0.35
RTFDC1-207ENST00000477573 TCHHL1Q5QJ38 904 aaPredicted RBP12.87□□□□□ -0.35
RTFDC1-207ENST00000477573 ADGRG5Q8IZF4 528 aa12.87□□□□□ -0.35
RTFDC1-207ENST00000477573 ZNF276Q8N554 614 aa12.87□□□□□ -0.35
RTFDC1-207ENST00000477573 CCDC33Q8N5R6 958 aa12.87□□□□□ -0.35
RTFDC1-207ENST00000477573 SLAIN1Q8ND83 568 aa12.87□□□□□ -0.35
RTFDC1-207ENST00000477573 TMEM79Q9BSE2 394 aa12.87□□□□□ -0.35
RTFDC1-207ENST00000477573 C1QTNF7Q9BXJ2 289 aa12.87□□□□□ -0.35
RTFDC1-207ENST00000477573 WWP1Q9H0M0 922 aa12.87□□□□□ -0.35
RTFDC1-207ENST00000477573 ARMCX1Q9P291 453 aa12.87□□□□□ -0.35
RTFDC1-207ENST00000477573 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.87□□□□□ -0.35
RTFDC1-207ENST00000477573 TBX20Q9UMR3 447 aa12.87□□□□□ -0.35
RTFDC1-207ENST00000477573 POMPQ9Y244 141 aa12.87□□□□□ -0.35
RTFDC1-207ENST00000477573 RNF11Q9Y3C5 154 aa12.87□□□□□ -0.35
RTFDC1-207ENST00000477573 MAFBQ9Y5Q3 323 aaPredicted RBP12.87□□□□□ -0.35
RTFDC1-207ENST00000477573 DOCK5Q9H7D0 1870 aa12.87□□□□□ -0.35
RTFDC1-207ENST00000477573 STBD1O95210 358 aa12.87□□□□□ -0.35
RTFDC1-207ENST00000477573 PCNAP12004 261 aa12.87□□□□□ -0.35
RTFDC1-207ENST00000477573 AOC1P19801 751 aa12.87□□□□□ -0.35
RTFDC1-207ENST00000477573 CCNA2P20248 432 aa12.87□□□□□ -0.35
RTFDC1-207ENST00000477573 SP2Q02086 613 aa12.87□□□□□ -0.35
RTFDC1-207ENST00000477573 RHAGQ02094 409 aa12.87□□□□□ -0.35
RTFDC1-207ENST00000477573 KDSRQ06136 332 aa12.87□□□□□ -0.35
RTFDC1-207ENST00000477573 ZNF33BQ06732 778 aa12.87□□□□□ -0.35
RTFDC1-207ENST00000477573 OVGP1Q12889 678 aa12.87□□□□□ -0.35
RTFDC1-207ENST00000477573 GALNT3Q14435 633 aa12.87□□□□□ -0.35
RTFDC1-207ENST00000477573 DLG2Q15700 870 aa12.87□□□□□ -0.35
RTFDC1-207ENST00000477573 ARHGAP44Q17R89 818 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms