RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 NIPAL4Q0D2K0 466 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 SF3A3Q12874 501 aaKnown RBP eCLIP2.99□□□□□ -1.93
HMGN4-202ENST00000477243 TMEM115Q12893 351 aaPredicted RBP2.99□□□□□ -1.93
HMGN4-202ENST00000477243 GPS1Q13098 491 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 ZBTB17Q13105 803 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 PDCLQ13371 301 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 BMPR2Q13873 1038 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 PDK1Q15118 436 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 RPS6KA1Q15418 735 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 DGKDQ16760 1214 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 GSTA3Q16772 222 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 IMMTQ16891 758 aaKnown RBP2.99□□□□□ -1.93
HMGN4-202ENST00000477243 HYAL4Q2M3T9 481 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 PROSER3Q2NL68 480 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 TWISTNBQ3B726 338 aaPredicted RBP2.99□□□□□ -1.93
HMGN4-202ENST00000477243 DPCR1Q3MIW9 517 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 LRIT3Q3SXY7 679 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 BOLA3Q53S33 107 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 TDRD12Q587J7 1177 aaKnown RBP2.99□□□□□ -1.93
HMGN4-202ENST00000477243 ZRANB3Q5FWF4 1079 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 SFMBT2Q5VUG0 894 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 SHEQ5VZ18 495 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 CES4AQ5XG92 561 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 FCRL6Q6DN72 434 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 DPY19L2P1Q6NXN4 242 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 SUSD1Q6UWL2 747 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 MEX3BQ6ZN04 569 aaKnown RBP2.99□□□□□ -1.93
HMGN4-202ENST00000477243 RBM43Q6ZSC3 357 aaKnown RBP2.99□□□□□ -1.93
HMGN4-202ENST00000477243 GSTA5Q7RTV2 222 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 CTAGE6Q86UF2 777 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 CABP7Q86V35 215 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 TRABD2AQ86V40 505 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 FAM160B2Q86V87 743 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 DCP2Q8IU60 420 aaKnown RBP2.99□□□□□ -1.93
HMGN4-202ENST00000477243 CTAGE4Q8IX94 777 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 DMRTC2Q8IXT2 367 aaPredicted RBP2.99□□□□□ -1.93
HMGN4-202ENST00000477243 RBM12BQ8IXT5 1001 aaKnown RBP2.99□□□□□ -1.93
HMGN4-202ENST00000477243 MFSD4AQ8N468 514 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 MINDY1Q8N5J2 469 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 TOP6BLQ8N6T0 577 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 ANKRD53Q8N9V6 530 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 IQUBQ8NA54 791 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 ZBTB8BQ8NAP8 495 aaPredicted RBP2.99□□□□□ -1.93
HMGN4-202ENST00000477243 DRAXINQ8NBI3 349 aaPredicted RBP2.99□□□□□ -1.93
HMGN4-202ENST00000477243 ARRDC4Q8NCT1 418 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 TMEM52Q8NDY8 209 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 NLGN4YQ8NFZ3 816 aaPredicted RBP2.99□□□□□ -1.93
HMGN4-202ENST00000477243 ZNF480Q8WV37 535 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 SLC13A3Q8WWT9 602 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 ZKSCAN4Q969J2 545 aaPredicted RBP2.99□□□□□ -1.93
HMGN4-202ENST00000477243 ITFG2Q969R8 447 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 INTS12Q96CB8 462 aaKnown RBP2.99□□□□□ -1.93
HMGN4-202ENST00000477243 HDAC11Q96DB2 347 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 TMCO6Q96DC7 493 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 SGF29Q96ES7 293 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 MAP6Q96JE9 813 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 DGAT2Q96PD7 388 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 AGAP2Q99490 1192 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 PIP5K1AQ99755 562 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 BTBD2Q9BX70 525 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 HEMGNQ9BXL5 484 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 TRIM31Q9BZY9 425 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 SLC25A32Q9H2D1 315 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 SLC32A1Q9H598 525 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 DNAJC18Q9H819 358 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 SERINC1Q9NRX5 453 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 ZDHHC7Q9NXF8 308 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 PSD3Q9NYI0 1048 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP2.99□□□□□ -1.93
HMGN4-202ENST00000477243 MOCS1Q9NZB8 636 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 SEPT10Q9P0V9 454 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 HMG20BQ9P0W2 317 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 VPS18Q9P253 973 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 XPR1Q9UBH6 696 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 HCSTQ9UBK5 93 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 TNFRSF10DQ9UBN6 386 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 TEKT2Q9UIF3 430 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 PTBP2Q9UKA9 531 aaKnown RBP2.99□□□□□ -1.93
HMGN4-202ENST00000477243 AJAP1Q9UKB5 411 aaPredicted RBP2.99□□□□□ -1.93
HMGN4-202ENST00000477243 ACSL6Q9UKU0 697 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 INTS6Q9UL03 887 aaKnown RBP2.99□□□□□ -1.93
HMGN4-202ENST00000477243 HPSEQ9Y251 543 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 DRG1Q9Y295 367 aaKnown RBP2.99□□□□□ -1.93
HMGN4-202ENST00000477243 STARD13Q9Y3M8 1113 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 PCDHB4Q9Y5E5 795 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 PCDHA5Q9Y5H7 936 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 ACTL7AQ9Y615 435 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 CAPN6Q9Y6Q1 641 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 DDX49Q9Y6V7 483 aaKnown RBP2.99□□□□□ -1.93
HMGN4-202ENST00000477243 BIRC6Q9NR09 4857 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 NSD2O96028 1365 aa2.99□□□□□ -1.93
HMGN4-202ENST00000477243 ASXL1Q8IXJ9 1541 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 MROH5Q6ZUA9 1318 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 TTC21BQ7Z4L5 1316 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 ADGRF5Q8IZF2 1346 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 NKTRP30414 1462 aaKnown RBP2.98□□□□□ -1.93
HMGN4-202ENST00000477243 LRRC37A3O60309 1634 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 MROH1Q8NDA8 1641 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 KIDINS220Q9ULH0 1771 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 DNAH14Q0VDD8 3507 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms