RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 SLC41A1Q8IVJ1 513 aa13.73□□□□□ -0.21
ACTN4-205ENST00000477174 UMODL1-AS1Q8N2C9 162 aa13.73□□□□□ -0.21
ACTN4-205ENST00000477174 GANCQ8TET4 914 aa13.73□□□□□ -0.21
ACTN4-205ENST00000477174 CTNNBL1Q8WYA6 563 aaPredicted RBP13.73□□□□□ -0.21
ACTN4-205ENST00000477174 MRFAP1L1Q96HT8 127 aa13.73□□□□□ -0.21
ACTN4-205ENST00000477174 HSPA12BQ96MM6 686 aa13.73□□□□□ -0.21
ACTN4-205ENST00000477174 CHP1Q99653 195 aa13.73□□□□□ -0.21
ACTN4-205ENST00000477174 OMDQ99983 421 aa13.73□□□□□ -0.21
ACTN4-205ENST00000477174 DHX35Q9H5Z1 703 aaKnown RBP13.73□□□□□ -0.21
ACTN4-205ENST00000477174 NHEJ1Q9H9Q4 299 aaPredicted RBP13.73□□□□□ -0.21
ACTN4-205ENST00000477174 TMEM74BQ9NUR3 256 aa13.73□□□□□ -0.21
ACTN4-205ENST00000477174 UVRAGQ9P2Y5 699 aa13.73□□□□□ -0.21
ACTN4-205ENST00000477174 EVLQ9UI08 416 aaPredicted RBP13.73□□□□□ -0.21
ACTN4-205ENST00000477174 LCMT1Q9UIC8 334 aa13.73□□□□□ -0.21
ACTN4-205ENST00000477174 ANAPC7Q9UJX3 599 aa13.73□□□□□ -0.21
ACTN4-205ENST00000477174 FZD4Q9ULV1 537 aa13.73□□□□□ -0.21
ACTN4-205ENST00000477174 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.73□□□□□ -0.21
ACTN4-205ENST00000477174 CEP250Q9BV73 2442 aa13.73□□□□□ -0.21
ACTN4-205ENST00000477174 ZSCAN5CA6NGD5 496 aaPredicted RBP13.72□□□□□ -0.21
ACTN4-205ENST00000477174 K7ERQ8 282 aa13.72□□□□□ -0.21
ACTN4-205ENST00000477174 MID1O15344 667 aa13.72□□□□□ -0.21
ACTN4-205ENST00000477174 SMAD6O43541 496 aaKnown RBP13.72□□□□□ -0.21
ACTN4-205ENST00000477174 KDELR3O43731 214 aa13.72□□□□□ -0.21
ACTN4-205ENST00000477174 IL1BP01584 269 aa13.72□□□□□ -0.21
ACTN4-205ENST00000477174 GOT1P17174 413 aa13.72□□□□□ -0.21
ACTN4-205ENST00000477174 GLDCP23378 1020 aa13.72□□□□□ -0.21
ACTN4-205ENST00000477174 ACSL1P33121 698 aa13.72□□□□□ -0.21
ACTN4-205ENST00000477174 SERPINH1P50454 418 aaKnown RBP13.72□□□□□ -0.21
ACTN4-205ENST00000477174 ZNF75DP51815 510 aa13.72□□□□□ -0.21
ACTN4-205ENST00000477174 DUOXA1Q1HG43 343 aa13.72□□□□□ -0.21
ACTN4-205ENST00000477174 PARP15Q460N3 678 aa13.72□□□□□ -0.21
ACTN4-205ENST00000477174 SLC23A3Q6PIS1 610 aa13.72□□□□□ -0.21
ACTN4-205ENST00000477174 LINGO4Q6UY18 593 aa13.72□□□□□ -0.21
ACTN4-205ENST00000477174 Q6ZVU0 165 aa13.72□□□□□ -0.21
ACTN4-205ENST00000477174 CYP4V2Q6ZWL3 525 aaPredicted RBP13.72□□□□□ -0.21
ACTN4-205ENST00000477174 GAS2L3Q86XJ1 694 aa13.72□□□□□ -0.21
ACTN4-205ENST00000477174 PLPP6Q8IY26 295 aa13.72□□□□□ -0.21
ACTN4-205ENST00000477174 TMIEQ8NEW7 156 aa13.72□□□□□ -0.21
ACTN4-205ENST00000477174 OR2A12Q8NGT7 310 aa13.72□□□□□ -0.21
ACTN4-205ENST00000477174 NETO1Q8TDF5 533 aa13.72□□□□□ -0.21
ACTN4-205ENST00000477174 ISG20Q96AZ6 181 aaKnown RBP13.72□□□□□ -0.21
ACTN4-205ENST00000477174 ARHGEF26Q96DR7 871 aa13.72□□□□□ -0.21
ACTN4-205ENST00000477174 PEBP4Q96S96 227 aa13.72□□□□□ -0.21
ACTN4-205ENST00000477174 SNRNP25Q9BV90 132 aaKnown RBP13.72□□□□□ -0.21
ACTN4-205ENST00000477174 NEUROG2Q9H2A3 272 aa13.72□□□□□ -0.21
ACTN4-205ENST00000477174 GPATCH2LQ9NWQ4 482 aa13.72□□□□□ -0.21
ACTN4-205ENST00000477174 DLL3Q9NYJ7 618 aa13.72□□□□□ -0.21
ACTN4-205ENST00000477174 SUSD2Q9UGT4 822 aa13.72□□□□□ -0.21
ACTN4-205ENST00000477174 LAMA1P25391 3075 aa13.71□□□□□ -0.21
ACTN4-205ENST00000477174 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.71□□□□□ -0.21
ACTN4-205ENST00000477174 A0A1W2PP55 124 aa13.71□□□□□ -0.21
ACTN4-205ENST00000477174 EEF2KO00418 725 aaKnown RBP13.71□□□□□ -0.21
ACTN4-205ENST00000477174 DAPK3O43293 454 aa13.71□□□□□ -0.21
ACTN4-205ENST00000477174 ZNF821O75541 412 aaPredicted RBP13.71□□□□□ -0.21
ACTN4-205ENST00000477174 RNASEH2AO75792 299 aaKnown RBP13.71□□□□□ -0.21
ACTN4-205ENST00000477174 SEMA4FO95754 770 aa13.71□□□□□ -0.21
ACTN4-205ENST00000477174 CD160O95971 181 aa13.71□□□□□ -0.21
ACTN4-205ENST00000477174 SERPINF2P08697 491 aa13.71□□□□□ -0.21
ACTN4-205ENST00000477174 TMEM253P0C7T8 217 aa13.71□□□□□ -0.21
ACTN4-205ENST00000477174 GNSP15586 552 aa13.71□□□□□ -0.21
ACTN4-205ENST00000477174 IL1R2P27930 398 aa13.71□□□□□ -0.21
ACTN4-205ENST00000477174 CHRNA3P32297 505 aa13.71□□□□□ -0.21
ACTN4-205ENST00000477174 RECQLP46063 649 aaPredicted RBP13.71□□□□□ -0.21
ACTN4-205ENST00000477174 ID4P47928 161 aa13.71□□□□□ -0.21
ACTN4-205ENST00000477174 PSMD8P48556 350 aa13.71□□□□□ -0.21
ACTN4-205ENST00000477174 NDST2P52849 883 aa13.71□□□□□ -0.21
ACTN4-205ENST00000477174 LIMK1P53667 647 aa13.71□□□□□ -0.21
ACTN4-205ENST00000477174 ARF5P84085 180 aa13.71□□□□□ -0.21
ACTN4-205ENST00000477174 CA9Q16790 459 aa13.71□□□□□ -0.21
ACTN4-205ENST00000477174 AASDHQ4L235 1098 aaPredicted RBP13.71□□□□□ -0.21
ACTN4-205ENST00000477174 RFX8Q6ZV50 586 aa13.71□□□□□ -0.21
ACTN4-205ENST00000477174 RGL4Q8IZJ4 473 aa13.71□□□□□ -0.21
ACTN4-205ENST00000477174 HDDC3Q8N4P3 179 aa13.71□□□□□ -0.21
ACTN4-205ENST00000477174 PCDH20Q8N6Y1 951 aaKnown RBP13.71□□□□□ -0.21
ACTN4-205ENST00000477174 TC2NQ8N9U0 490 aa13.71□□□□□ -0.21
ACTN4-205ENST00000477174 ZNF564Q8TBZ8 553 aaPredicted RBP13.71□□□□□ -0.21
ACTN4-205ENST00000477174 TEKT4Q8WW24 435 aa13.71□□□□□ -0.21
ACTN4-205ENST00000477174 NUSAP1Q9BXS6 441 aaKnown RBP13.71□□□□□ -0.21
ACTN4-205ENST00000477174 SMOC1Q9H4F8 434 aa13.71□□□□□ -0.21
ACTN4-205ENST00000477174 NOL6Q9H6R4 1146 aaKnown RBP13.71□□□□□ -0.21
ACTN4-205ENST00000477174 ZWILCHQ9H900 591 aa13.71□□□□□ -0.21
ACTN4-205ENST00000477174 CTTNBP2NLQ9P2B4 639 aa13.71□□□□□ -0.21
ACTN4-205ENST00000477174 TPX2Q9ULW0 747 aaKnown RBP13.71□□□□□ -0.21
ACTN4-205ENST00000477174 SLC6A14Q9UN76 642 aa13.71□□□□□ -0.21
ACTN4-205ENST00000477174 THADAQ6YHU6 1953 aa13.71□□□□□ -0.22
ACTN4-205ENST00000477174 PLXND1Q9Y4D7 1925 aa13.7□□□□□ -0.22
ACTN4-205ENST00000477174 LRRC72A6NJI9 287 aa13.7□□□□□ -0.22
ACTN4-205ENST00000477174 MEI4A8MW99 385 aa13.7□□□□□ -0.22
ACTN4-205ENST00000477174 RASA4BC9J798 803 aa13.7□□□□□ -0.22
ACTN4-205ENST00000477174 C1QTNF3-AMACRE9PGA6 284 aa13.7□□□□□ -0.22
ACTN4-205ENST00000477174 SLC7A4O43246 635 aa13.7□□□□□ -0.22
ACTN4-205ENST00000477174 RASA4O43374 803 aa13.7□□□□□ -0.22
ACTN4-205ENST00000477174 BNIP3LO60238 219 aa13.7□□□□□ -0.22
ACTN4-205ENST00000477174 PRNPP04156 253 aa13.7□□□□□ -0.22
ACTN4-205ENST00000477174 IRX4P78413 519 aa13.7□□□□□ -0.22
ACTN4-205ENST00000477174 CCDC15Q0P6D6 951 aa13.7□□□□□ -0.22
ACTN4-205ENST00000477174 SERINC3Q13530 473 aa13.7□□□□□ -0.22
ACTN4-205ENST00000477174 PUM1Q14671 1186 aaKnown RBP eCLIP13.7□□□□□ -0.224e-6■□□□□ 8.5
ACTN4-205ENST00000477174 DPYSL2Q16555 572 aa13.7□□□□□ -0.22
ACTN4-205ENST00000477174 HADHQ16836 314 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms