RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 CCR5P51681 352 aa16.6■□□□□ 0.25
COL1A1-205ENST00000476387 RACK1P63244 317 aaKnown RBP16.6■□□□□ 0.25
COL1A1-205ENST00000476387 ALFQ53S48 1182 aa16.6■□□□□ 0.25
COL1A1-205ENST00000476387 TDRD12Q587J7 1177 aaKnown RBP16.6■□□□□ 0.25
COL1A1-205ENST00000476387 C6orf118Q5T5N4 469 aa16.6■□□□□ 0.25
COL1A1-205ENST00000476387 E4F1Q66K89 784 aaPredicted RBP16.6■□□□□ 0.25
COL1A1-205ENST00000476387 NCEH1Q6PIU2 408 aa16.6■□□□□ 0.25
COL1A1-205ENST00000476387 WDR59Q6PJI9 974 aa16.6■□□□□ 0.25
COL1A1-205ENST00000476387 TFAP2DQ7Z6R9 452 aa16.6■□□□□ 0.25
COL1A1-205ENST00000476387 SETD3Q86TU7 594 aaPredicted RBP16.6■□□□□ 0.25
COL1A1-205ENST00000476387 ZNF683Q8IZ20 524 aa16.6■□□□□ 0.25
COL1A1-205ENST00000476387 STK40Q8N2I9 435 aa16.6■□□□□ 0.25
COL1A1-205ENST00000476387 CHCHD4Q8N4Q1 142 aa16.6■□□□□ 0.25
COL1A1-205ENST00000476387 BAHD1Q8TBE0 780 aaPredicted RBP16.6■□□□□ 0.25
COL1A1-205ENST00000476387 SETD7Q8WTS6 366 aaKnown RBP16.6■□□□□ 0.25
COL1A1-205ENST00000476387 FRS2Q8WU20 508 aa16.6■□□□□ 0.25
COL1A1-205ENST00000476387 VCPIP1Q96JH7 1222 aa16.6■□□□□ 0.25
COL1A1-205ENST00000476387 CDC6Q99741 560 aa16.6■□□□□ 0.25
COL1A1-205ENST00000476387 FEM1AQ9BSK4 669 aa16.6■□□□□ 0.25
COL1A1-205ENST00000476387 ZYG11BQ9C0D3 744 aa16.6■□□□□ 0.25
COL1A1-205ENST00000476387 TSPY26PQ9H489 355 aa16.6■□□□□ 0.25
COL1A1-205ENST00000476387 MPP6Q9NZW5 540 aa16.6■□□□□ 0.25
COL1A1-205ENST00000476387 CHD5Q8TDI0 1954 aa16.6■□□□□ 0.25
COL1A1-205ENST00000476387 FAM208BQ5VWN6 2430 aa16.59■□□□□ 0.25
COL1A1-205ENST00000476387 FAM47DPA6NHR8 397 aa16.59■□□□□ 0.25
COL1A1-205ENST00000476387 DRGXA6NNA5 263 aa16.59■□□□□ 0.25
COL1A1-205ENST00000476387 VILLO15195 856 aa16.59■□□□□ 0.25
COL1A1-205ENST00000476387 PCDHGA12O60330 932 aa16.59■□□□□ 0.25
COL1A1-205ENST00000476387 RRM1P23921 792 aa16.59■□□□□ 0.25
COL1A1-205ENST00000476387 OR1E1P30953 314 aa16.59■□□□□ 0.25
COL1A1-205ENST00000476387 ADRA1BP35368 520 aa16.59■□□□□ 0.25
COL1A1-205ENST00000476387 PBX1P40424 430 aa16.59■□□□□ 0.25
COL1A1-205ENST00000476387 CTSKP43235 329 aa16.59■□□□□ 0.25
COL1A1-205ENST00000476387 PSMD8P48556 350 aa16.59■□□□□ 0.25
COL1A1-205ENST00000476387 HDAC4P56524 1084 aa16.59■□□□□ 0.25
COL1A1-205ENST00000476387 KRT83P78385 493 aa16.59■□□□□ 0.25
COL1A1-205ENST00000476387 RAB6CQ53S08 254 aa16.59■□□□□ 0.25
COL1A1-205ENST00000476387 ZNF571Q7Z3V5 609 aaPredicted RBP16.59■□□□□ 0.25
COL1A1-205ENST00000476387 ADAT2Q7Z6V5 191 aaKnown RBP16.59■□□□□ 0.25
COL1A1-205ENST00000476387 DSG4Q86SJ6 1040 aa16.59■□□□□ 0.25
COL1A1-205ENST00000476387 AADATQ8N5Z0 425 aa16.59■□□□□ 0.25
COL1A1-205ENST00000476387 OR52K2Q8NGK3 314 aa16.59■□□□□ 0.25
COL1A1-205ENST00000476387 CENPIQ92674 756 aaPredicted RBP16.59■□□□□ 0.25
COL1A1-205ENST00000476387 SKA1Q96BD8 255 aa16.59■□□□□ 0.25
COL1A1-205ENST00000476387 ALG14Q96F25 216 aa16.59■□□□□ 0.25
COL1A1-205ENST00000476387 C2orf49Q9BVC5 232 aaPredicted RBP16.59■□□□□ 0.25
COL1A1-205ENST00000476387 ACE2Q9BYF1 805 aaPredicted RBP16.59■□□□□ 0.25
COL1A1-205ENST00000476387 RAB6CQ9H0N0 254 aa16.59■□□□□ 0.25
COL1A1-205ENST00000476387 TAS2R14Q9NYV8 317 aa16.59■□□□□ 0.25
COL1A1-205ENST00000476387 OR12D3Q9UGF7 316 aa16.59■□□□□ 0.25
COL1A1-205ENST00000476387 TCRBV5S1A1TA0A578 114 aa16.58■□□□□ 0.24
COL1A1-205ENST00000476387 CCP110O43303 1012 aa16.58■□□□□ 0.24
COL1A1-205ENST00000476387 ATP9BO43861 1147 aa16.58■□□□□ 0.24
COL1A1-205ENST00000476387 GZMAP12544 262 aa16.58■□□□□ 0.24
COL1A1-205ENST00000476387 CCT8P50990 548 aa16.58■□□□□ 0.24
COL1A1-205ENST00000476387 ZNF143P52747 638 aaPredicted RBP16.58■□□□□ 0.24
COL1A1-205ENST00000476387 ADPRHP54922 357 aa16.58■□□□□ 0.24
COL1A1-205ENST00000476387 NRG1Q02297 640 aaPredicted RBP16.58■□□□□ 0.24
COL1A1-205ENST00000476387 ACCSLQ4AC99 568 aa16.58■□□□□ 0.24
COL1A1-205ENST00000476387 SCYL2Q6P3W7 929 aa16.58■□□□□ 0.24
COL1A1-205ENST00000476387 VPS36Q86VN1 386 aa16.58■□□□□ 0.24
COL1A1-205ENST00000476387 ZCCHC14Q8WYQ9 949 aaKnown RBP16.58■□□□□ 0.24
COL1A1-205ENST00000476387 NTAN1Q96AB6 310 aa16.58■□□□□ 0.24
COL1A1-205ENST00000476387 FAM131CQ96AQ9 280 aa16.58■□□□□ 0.24
COL1A1-205ENST00000476387 TRIM11Q96F44 468 aa16.58■□□□□ 0.24
COL1A1-205ENST00000476387 CNPY3Q9BT09 278 aa16.58■□□□□ 0.24
COL1A1-205ENST00000476387 OSBPL2Q9H1P3 480 aa16.58■□□□□ 0.24
COL1A1-205ENST00000476387 PARVAQ9NVD7 372 aa16.58■□□□□ 0.24
COL1A1-205ENST00000476387 PPARGC1AQ9UBK2 798 aaKnown RBP16.58■□□□□ 0.24
COL1A1-205ENST00000476387 OR51B4Q9Y5P0 310 aa16.58■□□□□ 0.24
COL1A1-205ENST00000476387 PKD1L2Q7Z442 2459 aa16.58■□□□□ 0.24
COL1A1-205ENST00000476387 ZFHX4Q86UP3 3567 aa16.58■□□□□ 0.24
COL1A1-205ENST00000476387 ALOX15BO15296 676 aa16.57■□□□□ 0.24
COL1A1-205ENST00000476387 SLC7A4O43246 635 aa16.57■□□□□ 0.24
COL1A1-205ENST00000476387 ATMINO43313 823 aaPredicted RBP16.57■□□□□ 0.24
COL1A1-205ENST00000476387 CBFA2T2O43439 604 aa16.57■□□□□ 0.24
COL1A1-205ENST00000476387 IL1BP01584 269 aa16.57■□□□□ 0.24
COL1A1-205ENST00000476387 SKILP12757 684 aa16.57■□□□□ 0.24
COL1A1-205ENST00000476387 GRK6P43250 576 aa16.57■□□□□ 0.24
COL1A1-205ENST00000476387 C21orf59P57076 290 aa16.57■□□□□ 0.24
COL1A1-205ENST00000476387 RPL7AP62424 266 aaKnown RBP16.57■□□□□ 0.24
COL1A1-205ENST00000476387 ZBED6P86452 979 aa16.57■□□□□ 0.24
COL1A1-205ENST00000476387 EFHC2Q5JST6 749 aa16.57■□□□□ 0.24
COL1A1-205ENST00000476387 PPP1R15BQ5SWA1 713 aa16.57■□□□□ 0.24
COL1A1-205ENST00000476387 FAM46CQ5VWP2 391 aa16.57■□□□□ 0.24
COL1A1-205ENST00000476387 RWDD4Q6NW29 188 aaKnown RBP16.57■□□□□ 0.24
COL1A1-205ENST00000476387 LAYNQ6UX15 382 aa16.57■□□□□ 0.24
COL1A1-205ENST00000476387 ZNF783Q6ZMS7 281 aa16.57■□□□□ 0.24
COL1A1-205ENST00000476387 CCDC185Q8N715 623 aa16.57■□□□□ 0.24
COL1A1-205ENST00000476387 DCAF4L2Q8NA75 395 aa16.57■□□□□ 0.24
COL1A1-205ENST00000476387 RHBDD1Q8TEB9 315 aa16.57■□□□□ 0.24
COL1A1-205ENST00000476387 CPLX3Q8WVH0 158 aa16.57■□□□□ 0.24
COL1A1-205ENST00000476387 OR8D1Q8WZ84 308 aa16.57■□□□□ 0.24
COL1A1-205ENST00000476387 SYN2Q92777 582 aaPredicted RBP16.57■□□□□ 0.24
COL1A1-205ENST00000476387 ZNF653Q96CK0 615 aa16.57■□□□□ 0.24
COL1A1-205ENST00000476387 TBC1D31Q96DN5 1066 aa16.57■□□□□ 0.24
COL1A1-205ENST00000476387 KDM4CQ9H3R0 1056 aa16.57■□□□□ 0.24
COL1A1-205ENST00000476387 LUC7L2Q9Y383 392 aaKnown RBP16.57■□□□□ 0.24
COL1A1-205ENST00000476387 BZW2Q9Y6E2 419 aaKnown RBP16.57■□□□□ 0.24
COL1A1-205ENST00000476387 ANKRD11Q6UB99 2663 aaPredicted RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms