RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 SEMA5AQ13591 1074 aa12.49□□□□□ -0.41
MRPL55-227ENST00000475832 CDH18Q13634 790 aa12.49□□□□□ -0.41
MRPL55-227ENST00000475832 HNRNPDQ14103 355 aaKnown RBP12.49□□□□□ -0.41
MRPL55-227ENST00000475832 RARS2Q5T160 578 aaKnown RBP12.49□□□□□ -0.41
MRPL55-227ENST00000475832 STXBP5Q5T5C0 1151 aa12.49□□□□□ -0.41
MRPL55-227ENST00000475832 MARC1Q5VT66 337 aa12.49□□□□□ -0.41
MRPL55-227ENST00000475832 DENND2CQ68D51 928 aa12.49□□□□□ -0.41
MRPL55-227ENST00000475832 CES5AQ6NT32 575 aa12.49□□□□□ -0.41
MRPL55-227ENST00000475832 SYCE2Q6PIF2 218 aa12.49□□□□□ -0.41
MRPL55-227ENST00000475832 EP400NLQ6ZTU2 488 aa12.49□□□□□ -0.41
MRPL55-227ENST00000475832 CROCCP2Q86T23 111 aa12.49□□□□□ -0.41
MRPL55-227ENST00000475832 CIR1Q86X95 450 aaPredicted RBP12.49□□□□□ -0.41
MRPL55-227ENST00000475832 FAM217AQ8IXS0 508 aa12.49□□□□□ -0.41
MRPL55-227ENST00000475832 ZNF567Q8N184 647 aa12.49□□□□□ -0.41
MRPL55-227ENST00000475832 CARNMT1Q8N4J0 409 aa12.49□□□□□ -0.41
MRPL55-227ENST00000475832 CELF5Q8N6W0 485 aaKnown RBP12.49□□□□□ -0.41
MRPL55-227ENST00000475832 NAT8LQ8N9F0 302 aa12.49□□□□□ -0.41
MRPL55-227ENST00000475832 TDRD5Q8NAT2 981 aaKnown RBP12.49□□□□□ -0.41
MRPL55-227ENST00000475832 NETO2Q8NC67 525 aa12.49□□□□□ -0.41
MRPL55-227ENST00000475832 SUSD6Q92537 303 aa12.49□□□□□ -0.41
MRPL55-227ENST00000475832 OTUB2Q96DC9 234 aa12.49□□□□□ -0.41
MRPL55-227ENST00000475832 HMCESQ96FZ2 354 aa12.49□□□□□ -0.41
MRPL55-227ENST00000475832 TEKT5Q96M29 485 aa12.49□□□□□ -0.41
MRPL55-227ENST00000475832 RBM15Q96T37 977 aaKnown RBP eCLIP12.49□□□□□ -0.41
MRPL55-227ENST00000475832 CCDC77Q9BR77 488 aa12.49□□□□□ -0.41
MRPL55-227ENST00000475832 SPON2Q9BUD6 331 aa12.49□□□□□ -0.41
MRPL55-227ENST00000475832 MUC3BQ9H195 1237 aa12.49□□□□□ -0.41
MRPL55-227ENST00000475832 ADAM7Q9H2U9 754 aa12.49□□□□□ -0.41
MRPL55-227ENST00000475832 ETNK1Q9HBU6 452 aa12.49□□□□□ -0.41
MRPL55-227ENST00000475832 XAB2Q9HCS7 855 aaKnown RBP12.49□□□□□ -0.41
MRPL55-227ENST00000475832 EIF2B3Q9NR50 452 aaKnown RBP12.49□□□□□ -0.41
MRPL55-227ENST00000475832 ZNF446Q9NWS9 450 aa12.49□□□□□ -0.41
MRPL55-227ENST00000475832 FAM50BQ9Y247 325 aa12.49□□□□□ -0.41
MRPL55-227ENST00000475832 AAR2Q9Y312 384 aaKnown RBP12.49□□□□□ -0.41
MRPL55-227ENST00000475832 TRDMT1O14717 391 aaKnown RBP12.48□□□□□ -0.41
MRPL55-227ENST00000475832 MAP2K7O14733 419 aa12.48□□□□□ -0.41
MRPL55-227ENST00000475832 MOSPD3O75425 235 aa12.48□□□□□ -0.41
MRPL55-227ENST00000475832 LUC7L3O95232 432 aaKnown RBP12.48□□□□□ -0.41
MRPL55-227ENST00000475832 CEBPBP17676 345 aa12.48□□□□□ -0.41
MRPL55-227ENST00000475832 MAGEA6P43360 314 aa12.48□□□□□ -0.41
MRPL55-227ENST00000475832 EIF3BP55884 814 aaKnown RBP12.48□□□□□ -0.41
MRPL55-227ENST00000475832 RPS24P62847 133 aaKnown RBP12.48□□□□□ -0.41
MRPL55-227ENST00000475832 IFFO1Q0D2I5 559 aa12.48□□□□□ -0.41
MRPL55-227ENST00000475832 SERINC3Q13530 473 aa12.48□□□□□ -0.41
MRPL55-227ENST00000475832 KCNJ11Q14654 390 aa12.48□□□□□ -0.41
MRPL55-227ENST00000475832 RFTN1Q14699 578 aaPredicted RBP12.48□□□□□ -0.41
MRPL55-227ENST00000475832 SLC5A9Q2M3M2 681 aa12.48□□□□□ -0.41
MRPL55-227ENST00000475832 ATAT1Q5SQI0 421 aa12.48□□□□□ -0.41
MRPL55-227ENST00000475832 LRIG3Q6UXM1 1119 aa12.48□□□□□ -0.41
MRPL55-227ENST00000475832 GPR149Q86SP6 731 aa12.48□□□□□ -0.41
MRPL55-227ENST00000475832 RELL1Q8IUW5 271 aa12.48□□□□□ -0.41
MRPL55-227ENST00000475832 BBS7Q8IWZ6 715 aa12.48□□□□□ -0.41
MRPL55-227ENST00000475832 C12orf76Q8N812 135 aaPredicted RBP12.48□□□□□ -0.41
MRPL55-227ENST00000475832 MCUQ8NE86 351 aa12.48□□□□□ -0.41
MRPL55-227ENST00000475832 LRRN4Q8WUT4 740 aa12.48□□□□□ -0.41
MRPL55-227ENST00000475832 DEPDC1BQ8WUY9 529 aa12.48□□□□□ -0.41
MRPL55-227ENST00000475832 MAML1Q92585 1016 aa12.48□□□□□ -0.41
MRPL55-227ENST00000475832 ARHGEF2Q92974 986 aaKnown RBP12.48□□□□□ -0.41
MRPL55-227ENST00000475832 PRICKLE1Q96MT3 831 aaPredicted RBP12.48□□□□□ -0.41
MRPL55-227ENST00000475832 AGAP3Q96P47 875 aa12.48□□□□□ -0.41
MRPL55-227ENST00000475832 IL12RB2Q99665 862 aa12.48□□□□□ -0.41
MRPL55-227ENST00000475832 GBA3Q9H227 469 aa12.48□□□□□ -0.41
MRPL55-227ENST00000475832 PABPC3Q9H361 631 aaKnown RBP12.48□□□□□ -0.41
MRPL55-227ENST00000475832 ATP13A1Q9HD20 1204 aa12.48□□□□□ -0.41
MRPL55-227ENST00000475832 SAYSD1Q9NPB0 183 aa12.48□□□□□ -0.41
MRPL55-227ENST00000475832 NDFIP2Q9NV92 336 aa12.48□□□□□ -0.41
MRPL55-227ENST00000475832 RBM22Q9NW64 420 aaKnown RBP eCLIP12.48□□□□□ -0.418e-13■■■□□ 15.5
MRPL55-227ENST00000475832 PRKAG3Q9UGI9 489 aa12.48□□□□□ -0.41
MRPL55-227ENST00000475832 TBC1D30Q9Y2I9 924 aa12.48□□□□□ -0.41
MRPL55-227ENST00000475832 TTLL3Q9Y4R7 772 aa12.48□□□□□ -0.41
MRPL55-227ENST00000475832 ZNF638Q14966 1978 aaKnown RBP12.48□□□□□ -0.41
MRPL55-227ENST00000475832 CACNA1GO43497 2377 aa12.48□□□□□ -0.41
MRPL55-227ENST00000475832 GOLGA8MH3BSY2 632 aa12.47□□□□□ -0.41
MRPL55-227ENST00000475832 ZBTB24O43167 697 aaPredicted RBP12.47□□□□□ -0.41
MRPL55-227ENST00000475832 PRAMEF11O60813 436 aa12.47□□□□□ -0.41
MRPL55-227ENST00000475832 METTL18O95568 372 aa12.47□□□□□ -0.41
MRPL55-227ENST00000475832 MLNP12872 115 aa12.47□□□□□ -0.41
MRPL55-227ENST00000475832 PSMB4P28070 264 aa12.47□□□□□ -0.41
MRPL55-227ENST00000475832 PHBP35232 272 aa12.47□□□□□ -0.41
MRPL55-227ENST00000475832 HSD17B3P37058 310 aa12.47□□□□□ -0.41
MRPL55-227ENST00000475832 MAGEA4P43358 317 aa12.47□□□□□ -0.41
MRPL55-227ENST00000475832 IRAK1P51617 712 aa12.47□□□□□ -0.41
MRPL55-227ENST00000475832 NRLP54845 237 aa12.47□□□□□ -0.41
MRPL55-227ENST00000475832 GEMP55040 296 aa12.47□□□□□ -0.41
MRPL55-227ENST00000475832 GEMIN4P57678 1058 aaKnown RBP12.47□□□□□ -0.41
MRPL55-227ENST00000475832 FAM193AP78312 1265 aa12.47□□□□□ -0.41
MRPL55-227ENST00000475832 ITKQ08881 620 aa12.47□□□□□ -0.41
MRPL55-227ENST00000475832 PDIA2Q13087 525 aaKnown RBP12.47□□□□□ -0.41
MRPL55-227ENST00000475832 SLC12A1Q13621 1099 aa12.47□□□□□ -0.41
MRPL55-227ENST00000475832 ZNF235Q14590 738 aa12.47□□□□□ -0.41
MRPL55-227ENST00000475832 KCTD19Q17RG1 926 aaPredicted RBP12.47□□□□□ -0.41
MRPL55-227ENST00000475832 RNF219Q5W0B1 726 aaPredicted RBP12.47□□□□□ -0.41
MRPL55-227ENST00000475832 LINC00523Q86TU6 105 aa12.47□□□□□ -0.41
MRPL55-227ENST00000475832 ARID3BQ8IVW6 561 aaPredicted RBP12.47□□□□□ -0.41
MRPL55-227ENST00000475832 MFN1Q8IWA4 741 aa12.47□□□□□ -0.41
MRPL55-227ENST00000475832 TP53INP2Q8IXH6 220 aa12.47□□□□□ -0.41
MRPL55-227ENST00000475832 ZSCAN18Q8TBC5 510 aaPredicted RBP12.47□□□□□ -0.41
MRPL55-227ENST00000475832 USP33Q8TEY7 942 aa12.47□□□□□ -0.41
MRPL55-227ENST00000475832 PYROXD1Q8WU10 500 aa12.47□□□□□ -0.41
MRPL55-227ENST00000475832 ING5Q8WYH8 240 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms