RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 SGK1O00141 431 aa10.58□□□□□ -0.72
CASC3-204ENST00000474190 DAPK3O43293 454 aa10.58□□□□□ -0.72
CASC3-204ENST00000474190 ATP9BO43861 1147 aa10.58□□□□□ -0.72
CASC3-204ENST00000474190 RNF40O75150 1001 aa10.58□□□□□ -0.72
CASC3-204ENST00000474190 GJB3O75712 270 aa10.58□□□□□ -0.72
CASC3-204ENST00000474190 APOC2P02655 101 aa10.58□□□□□ -0.72
CASC3-204ENST00000474190 APODP05090 189 aa10.58□□□□□ -0.72
CASC3-204ENST00000474190 SRCP12931 536 aa10.58□□□□□ -0.72
CASC3-204ENST00000474190 TGM2P21980 687 aa10.58□□□□□ -0.72
CASC3-204ENST00000474190 RGRP47804 291 aa10.58□□□□□ -0.72
CASC3-204ENST00000474190 SEC13P55735 322 aa10.58□□□□□ -0.72
CASC3-204ENST00000474190 ECT2LQ008S8 904 aa10.58□□□□□ -0.72
CASC3-204ENST00000474190 PPIDQ08752 370 aaKnown RBP10.58□□□□□ -0.72
CASC3-204ENST00000474190 WASHC5Q12768 1159 aa10.58□□□□□ -0.72
CASC3-204ENST00000474190 GRSF1Q12849 480 aaKnown RBP eCLIP10.58□□□□□ -0.72
CASC3-204ENST00000474190 ZBTB17Q13105 803 aa10.58□□□□□ -0.72
CASC3-204ENST00000474190 EIF4HQ15056 248 aaKnown RBP10.58□□□□□ -0.72
CASC3-204ENST00000474190 KIAA1211LQ6NV74 962 aa10.58□□□□□ -0.72
CASC3-204ENST00000474190 TMEM92Q6UXU6 159 aa10.58□□□□□ -0.72
CASC3-204ENST00000474190 BMP8AQ7Z5Y6 402 aa10.58□□□□□ -0.72
CASC3-204ENST00000474190 MAML2Q8IZL2 1156 aaPredicted RBP10.58□□□□□ -0.72
CASC3-204ENST00000474190 PGBD5Q8N414 524 aa10.58□□□□□ -0.72
CASC3-204ENST00000474190 TEX26Q8N6G2 289 aa10.58□□□□□ -0.72
CASC3-204ENST00000474190 ALLCQ8N6M5 410 aa10.58□□□□□ -0.72
CASC3-204ENST00000474190 TMEM105Q8N8V8 129 aa10.58□□□□□ -0.72
CASC3-204ENST00000474190 ACTL9Q8TC94 416 aa10.58□□□□□ -0.72
CASC3-204ENST00000474190 ATG4AQ8WYN0 398 aa10.58□□□□□ -0.72
CASC3-204ENST00000474190 FATE1Q969F0 183 aa10.58□□□□□ -0.72
CASC3-204ENST00000474190 HDAC11Q96DB2 347 aa10.58□□□□□ -0.72
CASC3-204ENST00000474190 C16orf45Q96MC5 204 aaPredicted RBP10.58□□□□□ -0.72
CASC3-204ENST00000474190 NAPGQ99747 312 aaPredicted RBP10.58□□□□□ -0.72
CASC3-204ENST00000474190 GABRG3Q99928 467 aa10.58□□□□□ -0.72
CASC3-204ENST00000474190 CHRDQ9H2X0 955 aa10.58□□□□□ -0.72
CASC3-204ENST00000474190 LMAN1LQ9HAT1 526 aa10.58□□□□□ -0.72
CASC3-204ENST00000474190 ATP13A1Q9HD20 1204 aa10.58□□□□□ -0.72
CASC3-204ENST00000474190 CACNA2D2Q9NY47 1150 aa10.58□□□□□ -0.72
CASC3-204ENST00000474190 LHX3Q9UBR4 397 aa10.58□□□□□ -0.72
CASC3-204ENST00000474190 VPS28Q9UK41 221 aa10.58□□□□□ -0.72
CASC3-204ENST00000474190 CBX4O00257 560 aa10.57□□□□□ -0.72
CASC3-204ENST00000474190 DFFAO00273 331 aa10.57□□□□□ -0.72
CASC3-204ENST00000474190 CES2O00748 559 aa10.57□□□□□ -0.72
CASC3-204ENST00000474190 TIMM44O43615 452 aa10.57□□□□□ -0.72
CASC3-204ENST00000474190 FGGP02679 453 aa10.57□□□□□ -0.72
CASC3-204ENST00000474190 DCNP07585 359 aaKnown RBP10.57□□□□□ -0.72
CASC3-204ENST00000474190 TDGF1P13385 188 aa10.57□□□□□ -0.72
CASC3-204ENST00000474190 HLA-EP13747 358 aa10.57□□□□□ -0.72
CASC3-204ENST00000474190 AOC1P19801 751 aa10.57□□□□□ -0.72
CASC3-204ENST00000474190 CR2P20023 1033 aa10.57□□□□□ -0.72
CASC3-204ENST00000474190 TIE1P35590 1138 aa10.57□□□□□ -0.72
CASC3-204ENST00000474190 RPS9P46781 194 aaKnown RBP10.57□□□□□ -0.72
CASC3-204ENST00000474190 NR2C2P49116 596 aa10.57□□□□□ -0.72
CASC3-204ENST00000474190 SERPINH1P50454 418 aaKnown RBP10.57□□□□□ -0.72
CASC3-204ENST00000474190 OXCT1P55809 520 aa10.57□□□□□ -0.72
CASC3-204ENST00000474190 OTUD4Q01804 1114 aaKnown RBP10.57□□□□□ -0.72
CASC3-204ENST00000474190 SLC10A7Q0GE19 358 aa10.57□□□□□ -0.72
CASC3-204ENST00000474190 UBXN2BQ14CS0 331 aa10.57□□□□□ -0.72
CASC3-204ENST00000474190 OASLQ15646 514 aaKnown RBP10.57□□□□□ -0.72
CASC3-204ENST00000474190 C9orf64Q5T6V5 341 aa10.57□□□□□ -0.72
CASC3-204ENST00000474190 CCDC50Q8IVM0 306 aa10.57□□□□□ -0.72
CASC3-204ENST00000474190 SH2D3CQ8N5H7 860 aa10.57□□□□□ -0.72
CASC3-204ENST00000474190 ZNF366Q8N895 744 aa10.57□□□□□ -0.72
CASC3-204ENST00000474190 ZNF557Q8N988 423 aaPredicted RBP10.57□□□□□ -0.72
CASC3-204ENST00000474190 KDM1BQ8NB78 822 aa10.57□□□□□ -0.72
CASC3-204ENST00000474190 ACTRT1Q8TDG2 376 aa10.57□□□□□ -0.72
CASC3-204ENST00000474190 KCNV2Q8TDN2 545 aa10.57□□□□□ -0.72
CASC3-204ENST00000474190 PTPRN2Q92932 1015 aa10.57□□□□□ -0.72
CASC3-204ENST00000474190 ACDQ96AP0 544 aa10.57□□□□□ -0.72
CASC3-204ENST00000474190 SHDQ96IW2 340 aa10.57□□□□□ -0.72
CASC3-204ENST00000474190 QKIQ96PU8 341 aaKnown RBP eCLIP10.57□□□□□ -0.72
CASC3-204ENST00000474190 GORASP1Q9BQQ3 440 aa10.57□□□□□ -0.72
CASC3-204ENST00000474190 SPON2Q9BUD6 331 aa10.57□□□□□ -0.72
CASC3-204ENST00000474190 CIPCQ9C0C6 399 aa10.57□□□□□ -0.72
CASC3-204ENST00000474190 MUC3BQ9H195 1237 aa10.57□□□□□ -0.72
CASC3-204ENST00000474190 FCF1Q9Y324 198 aaKnown RBP10.57□□□□□ -0.72
CASC3-204ENST00000474190 HEY1Q9Y5J3 304 aa10.57□□□□□ -0.72
CASC3-204ENST00000474190 STON1Q9Y6Q2 735 aa10.57□□□□□ -0.72
CASC3-204ENST00000474190 DCHS1Q96JQ0 3298 aa10.57□□□□□ -0.72
CASC3-204ENST00000474190 ARHGAP42A6NI28 874 aa10.56□□□□□ -0.72
CASC3-204ENST00000474190 MATN3O15232 486 aa10.56□□□□□ -0.72
CASC3-204ENST00000474190 LIASO43766 372 aa10.56□□□□□ -0.72
CASC3-204ENST00000474190 CEP104O60308 925 aa10.56□□□□□ -0.72
CASC3-204ENST00000474190 TMCC1O94876 653 aa10.56□□□□□ -0.72
CASC3-204ENST00000474190 ASLP04424 464 aa10.56□□□□□ -0.72
CASC3-204ENST00000474190 CTSLP07711 333 aa10.56□□□□□ -0.72
CASC3-204ENST00000474190 SRPRAP08240 638 aaKnown RBP10.56□□□□□ -0.72
CASC3-204ENST00000474190 ZFXP17010 805 aaPredicted RBP10.56□□□□□ -0.72
CASC3-204ENST00000474190 POLR2EP19388 210 aaKnown RBP10.56□□□□□ -0.72
CASC3-204ENST00000474190 CD68P34810 354 aaPredicted RBP10.56□□□□□ -0.72
CASC3-204ENST00000474190 WASP42768 502 aa10.56□□□□□ -0.72
CASC3-204ENST00000474190 CLCN6P51797 869 aa10.56□□□□□ -0.72
CASC3-204ENST00000474190 METAP1P53582 386 aa10.56□□□□□ -0.72
CASC3-204ENST00000474190 COPAP53621 1224 aa10.56□□□□□ -0.72
CASC3-204ENST00000474190 GDF10P55107 478 aa10.56□□□□□ -0.72
CASC3-204ENST00000474190 MRPS21P82921 87 aaKnown RBP10.56□□□□□ -0.72
CASC3-204ENST00000474190 IL10RBQ08334 325 aa10.56□□□□□ -0.72
CASC3-204ENST00000474190 MTAPQ13126 283 aa10.56□□□□□ -0.72
CASC3-204ENST00000474190 TFDP2Q14188 446 aa10.56□□□□□ -0.72
CASC3-204ENST00000474190 CYP1B1Q16678 543 aa10.56□□□□□ -0.72
CASC3-204ENST00000474190 HNRNPA1L2Q32P51 320 aaKnown RBP10.56□□□□□ -0.72
CASC3-204ENST00000474190 FBXO43Q4G163 708 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms