RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 TMEM209Q96SK2 561 aa2.81□□□□□ -1.96
XRN1-210ENST00000472697 DIRC2Q96SL1 478 aa2.81□□□□□ -1.96
XRN1-210ENST00000472697 SYT17Q9BSW7 474 aa2.81□□□□□ -1.96
XRN1-210ENST00000472697 HGH1Q9BTY7 390 aa2.81□□□□□ -1.96
XRN1-210ENST00000472697 THUMPD3Q9BV44 507 aaKnown RBP2.81□□□□□ -1.96
XRN1-210ENST00000472697 C2orf40Q9H1Z8 148 aa2.81□□□□□ -1.96
XRN1-210ENST00000472697 PDCL3Q9H2J4 239 aa2.81□□□□□ -1.96
XRN1-210ENST00000472697 RABEP2Q9H5N1 569 aa2.81□□□□□ -1.96
XRN1-210ENST00000472697 MAGEE1Q9HCI5 957 aa2.81□□□□□ -1.96
XRN1-210ENST00000472697 MTPAPQ9NVV4 582 aaKnown RBP eCLIP2.81□□□□□ -1.96
XRN1-210ENST00000472697 ALKBH4Q9NXW9 302 aa2.81□□□□□ -1.96
XRN1-210ENST00000472697 SELENONQ9NZV5 590 aa2.81□□□□□ -1.96
XRN1-210ENST00000472697 KCND2Q9NZV8 630 aa2.81□□□□□ -1.96
XRN1-210ENST00000472697 CPSF2Q9P2I0 782 aaKnown RBP2.81□□□□□ -1.96
XRN1-210ENST00000472697 ODF2LQ9ULJ1 636 aa2.81□□□□□ -1.96
XRN1-210ENST00000472697 SH3BP1Q9Y3L3 701 aa2.81□□□□□ -1.96
XRN1-210ENST00000472697 LYVE1Q9Y5Y7 322 aa2.81□□□□□ -1.96
XRN1-210ENST00000472697 RGS12O14924 1447 aa2.81□□□□□ -1.96
XRN1-210ENST00000472697 MAP3K1Q13233 1512 aa2.81□□□□□ -1.96
XRN1-210ENST00000472697 TBC1D3DA0A087WVF3 549 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 TBC1D3IA0A087WXS9 549 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 TBC1D3EA0A087X179 549 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 TBC1D3KA0A087X1G2 549 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 A0A0A0MQY5 61 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 A0A0A6YYC8 382 aaPredicted RBP2.8□□□□□ -1.96
XRN1-210ENST00000472697 CCDC196A0A1B0GTZ2 297 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 FAM170AA1A519 330 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 C1orf226A1L170 272 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 TBC1D3BA6NDS4 549 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 TBC1D3FA6NER0 549 aaPredicted RBP2.8□□□□□ -1.96
XRN1-210ENST00000472697 A8MXE2 369 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 TBC1D3LB9A6J9 549 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 FAM86B1E9PN63 330 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 I3L1I5 382 aaPredicted RBP2.8□□□□□ -1.96
XRN1-210ENST00000472697 POMCP01189 267 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 FAM86B2P0C5J1 330 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 TBC1D3HP0C7X1 549 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 MMP9P14780 707 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 ZNF28P17035 718 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 CALRP27797 417 aaKnown RBP2.8□□□□□ -1.96
XRN1-210ENST00000472697 SSTR4P31391 388 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 APOBEC3AP31941 199 aaPredicted RBP2.8□□□□□ -1.96
XRN1-210ENST00000472697 PSMB10P40306 273 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 MTNR1AP48039 350 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 AGTR2P50052 363 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 EPHB4P54760 987 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 ARSFP54793 590 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 NME5P56597 212 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 TUBB4BP68371 445 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 RBM6P78332 1123 aaKnown RBP2.8□□□□□ -1.96
XRN1-210ENST00000472697 OLR1P78380 273 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 ARHGAP8P85298 464 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 CALD1Q05682 793 aaKnown RBP2.8□□□□□ -1.96
XRN1-210ENST00000472697 KLHL30Q0D2K2 578 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 THOC5Q13769 683 aaKnown RBP2.8□□□□□ -1.96
XRN1-210ENST00000472697 SLC39A14Q15043 492 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 SLC18A3Q16572 532 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 LRIF1Q5T3J3 769 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 TBC1D3GQ6DHY5 549 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 TBC1D3CQ6IPX1 549 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 FAM111BQ6SJ93 734 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 NLRP14Q86W24 1093 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 FAM219AQ8IW50 185 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 TBC1D3Q8IZP1 549 aaPredicted RBP2.8□□□□□ -1.96
XRN1-210ENST00000472697 RBM15BQ8NDT2 890 aaKnown RBP2.8□□□□□ -1.96
XRN1-210ENST00000472697 DUSP19Q8WTR2 217 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 TEKT4Q8WW24 435 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 GLG1Q92896 1179 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 TSGA13Q96PP4 275 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 PRR25Q96S07 402 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 NAA11Q9BSU3 229 aaPredicted RBP2.8□□□□□ -1.96
XRN1-210ENST00000472697 TEX13BQ9BXU2 312 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 IFIH1Q9BYX4 1025 aaKnown RBP2.8□□□□□ -1.96
XRN1-210ENST00000472697 FRMD8Q9BZ67 464 aaPredicted RBP2.8□□□□□ -1.96
XRN1-210ENST00000472697 EDEM3Q9BZQ6 932 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 OR10A2Q9H208 303 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 PLK3Q9H4B4 646 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 SMARCAD1Q9H4L7 1026 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 NRDE2Q9H7Z3 1164 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 RLIMQ9NVW2 624 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 PLK2Q9NYY3 685 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 SEPT10Q9P0V9 454 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 CD207Q9UJ71 328 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 CA14Q9ULX7 337 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 ENTPD2Q9Y5L3 495 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 UGGT1Q9NYU2 1555 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 COL22A1Q8NFW1 1626 aaPredicted RBP2.8□□□□□ -1.96
XRN1-210ENST00000472697 OR6C76A6NM76 312 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 PI4K2BG5E9Z4 385 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 FYB1O15117 783 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 ST8SIA3O43173 380 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 RB1P06400 928 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 SNRPA1P09661 255 aaKnown RBP2.8□□□□□ -1.96
XRN1-210ENST00000472697 GDNFP39905 211 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 GATA4P43694 442 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 GSTM5P46439 218 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 RRP1P56182 461 aaKnown RBP2.8□□□□□ -1.96
XRN1-210ENST00000472697 UBASH3AP57075 661 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 TIAL1Q01085 375 aaKnown RBP eCLIP2.8□□□□□ -1.96
XRN1-210ENST00000472697 BYSLQ13895 437 aaKnown RBP2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms