RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 TLE6Q9H808 572 aa18.16■□□□□ 0.5
MCF2L-221ENST00000469415 NMRAL1Q9HBL8 299 aa18.16■□□□□ 0.5
MCF2L-221ENST00000469415 GABRQQ9UN88 632 aa18.16■□□□□ 0.5
MCF2L-221ENST00000469415 TMEM233B4DJY2 109 aa18.15■□□□□ 0.5
MCF2L-221ENST00000469415 HHLA1C9JL84 531 aa18.15■□□□□ 0.5
MCF2L-221ENST00000469415 BIRC5O15392 142 aa18.15■□□□□ 0.5
MCF2L-221ENST00000469415 PCSK1P29120 753 aa18.15■□□□□ 0.5
MCF2L-221ENST00000469415 GRK4P32298 578 aa18.15■□□□□ 0.5
MCF2L-221ENST00000469415 SCNN1AP37088 669 aa18.15■□□□□ 0.5
MCF2L-221ENST00000469415 TUBP50607 506 aa18.15■□□□□ 0.5
MCF2L-221ENST00000469415 KRT72Q14CN4 511 aa18.15■□□□□ 0.5
MCF2L-221ENST00000469415 LRRC74BQ6ZQY2 392 aa18.15■□□□□ 0.5
MCF2L-221ENST00000469415 TUBB6Q9BUF5 446 aa18.15■□□□□ 0.5
MCF2L-221ENST00000469415 SLC39A8Q9C0K1 460 aa18.15■□□□□ 0.5
MCF2L-221ENST00000469415 FAM124BQ9H5Z6 455 aaPredicted RBP18.15■□□□□ 0.5
MCF2L-221ENST00000469415 CHST12Q9NRB3 414 aa18.15■□□□□ 0.5
MCF2L-221ENST00000469415 RBM22Q9NW64 420 aaKnown RBP eCLIP18.15■□□□□ 0.52e-10■■■□□ 16.2
MCF2L-221ENST00000469415 WFS1O76024 890 aa18.15■□□□□ 0.5
MCF2L-221ENST00000469415 SERPINA6P08185 405 aa18.15■□□□□ 0.5
MCF2L-221ENST00000469415 RGS2P41220 211 aa18.15■□□□□ 0.5
MCF2L-221ENST00000469415 UPP1Q16831 310 aa18.15■□□□□ 0.5
MCF2L-221ENST00000469415 TSNAXIP1Q2TAA8 658 aa18.15■□□□□ 0.5
MCF2L-221ENST00000469415 SLC39A12Q504Y0 691 aa18.15■□□□□ 0.5
MCF2L-221ENST00000469415 PPM1LQ5SGD2 360 aa18.15■□□□□ 0.5
MCF2L-221ENST00000469415 ARCQ7LC44 396 aa18.15■□□□□ 0.5
MCF2L-221ENST00000469415 METTL23Q86XA0 190 aa18.15■□□□□ 0.5
MCF2L-221ENST00000469415 DEFB107AQ8IZN7 70 aa18.15■□□□□ 0.5
MCF2L-221ENST00000469415 TEKT5Q96M29 485 aa18.15■□□□□ 0.5
MCF2L-221ENST00000469415 GATA5Q9BWX5 397 aaPredicted RBP18.15■□□□□ 0.5
MCF2L-221ENST00000469415 FSD1LQ9BXM9 530 aa18.15■□□□□ 0.5
MCF2L-221ENST00000469415 GBA3Q9H227 469 aa18.15■□□□□ 0.5
MCF2L-221ENST00000469415 PPM1HQ9ULR3 514 aa18.15■□□□□ 0.5
MCF2L-221ENST00000469415 DICER1Q9UPY3 1922 aaKnown RBP18.15■□□□□ 0.5
MCF2L-221ENST00000469415 EME2A4GXA9 379 aaPredicted RBP18.15■□□□□ 0.5
MCF2L-221ENST00000469415 ZNF487B1APH4 448 aa18.15■□□□□ 0.5
MCF2L-221ENST00000469415 FBXO21O94952 628 aa18.15■□□□□ 0.5
MCF2L-221ENST00000469415 TSPAN8P19075 237 aa18.15■□□□□ 0.5
MCF2L-221ENST00000469415 LIMK2P53671 638 aa18.15■□□□□ 0.5
MCF2L-221ENST00000469415 GRTP1Q5TC63 336 aa18.15■□□□□ 0.5
MCF2L-221ENST00000469415 TAF2Q6P1X5 1199 aa18.15■□□□□ 0.5
MCF2L-221ENST00000469415 RPAINQ86UA6 219 aa18.15■□□□□ 0.5
MCF2L-221ENST00000469415 CIR1Q86X95 450 aaPredicted RBP18.15■□□□□ 0.5
MCF2L-221ENST00000469415 HPS6Q86YV9 775 aa18.15■□□□□ 0.5
MCF2L-221ENST00000469415 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.15■□□□□ 0.5
MCF2L-221ENST00000469415 YIPF3Q9GZM5 350 aa18.15■□□□□ 0.5
MCF2L-221ENST00000469415 NMUR1Q9HB89 426 aa18.15■□□□□ 0.5
MCF2L-221ENST00000469415 NMRK2Q9NPI5 230 aa18.15■□□□□ 0.5
MCF2L-221ENST00000469415 CDH9Q9ULB4 789 aa18.15■□□□□ 0.5
MCF2L-221ENST00000469415 SLC4A1P02730 911 aa18.14■□□□□ 0.49
MCF2L-221ENST00000469415 AHSGP02765 367 aa18.14■□□□□ 0.49
MCF2L-221ENST00000469415 UBTFL6P0CB48 400 aaPredicted RBP18.14■□□□□ 0.49
MCF2L-221ENST00000469415 AKR1A1P14550 325 aa18.14■□□□□ 0.49
MCF2L-221ENST00000469415 SERPINB8P50452 374 aa18.14■□□□□ 0.49
MCF2L-221ENST00000469415 SLC5A3P53794 718 aa18.14■□□□□ 0.49
MCF2L-221ENST00000469415 ANO7Q6IWH7 933 aa18.14■□□□□ 0.49
MCF2L-221ENST00000469415 TIFABQ6ZNK6 161 aa18.14■□□□□ 0.49
MCF2L-221ENST00000469415 BHLHA9Q7RTU4 235 aa18.14■□□□□ 0.49
MCF2L-221ENST00000469415 KBTBD2Q8IY47 623 aa18.14■□□□□ 0.49
MCF2L-221ENST00000469415 TDRD5Q8NAT2 981 aaKnown RBP18.14■□□□□ 0.49
MCF2L-221ENST00000469415 GTF2IRD1Q9UHL9 959 aa18.14■□□□□ 0.49
MCF2L-221ENST00000469415 FNDC3AQ9Y2H6 1198 aaKnown RBP18.14■□□□□ 0.49
MCF2L-221ENST00000469415 SLC45A1Q9Y2W3 748 aa18.14■□□□□ 0.49
MCF2L-221ENST00000469415 MTF2Q9Y483 593 aaPredicted RBP18.14■□□□□ 0.49
MCF2L-221ENST00000469415 ZBTB14O43829 449 aa18.14■□□□□ 0.49
MCF2L-221ENST00000469415 JUNP05412 331 aaKnown RBP18.14■□□□□ 0.49
MCF2L-221ENST00000469415 ELNP15502 786 aa18.14■□□□□ 0.49
MCF2L-221ENST00000469415 CNTFP26441 200 aa18.14■□□□□ 0.49
MCF2L-221ENST00000469415 SLC34A1Q06495 639 aa18.14■□□□□ 0.49
MCF2L-221ENST00000469415 SEMA3BQ13214 749 aa18.14■□□□□ 0.49
MCF2L-221ENST00000469415 C6orf163Q5TEZ5 329 aa18.14■□□□□ 0.49
MCF2L-221ENST00000469415 LIMS2Q7Z4I7 341 aa18.14■□□□□ 0.49
MCF2L-221ENST00000469415 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.14■□□□□ 0.49
MCF2L-221ENST00000469415 RNF217Q8TC41 542 aa18.14■□□□□ 0.49
MCF2L-221ENST00000469415 NAT9Q9BTE0 207 aa18.14■□□□□ 0.49
MCF2L-221ENST00000469415 DONSONQ9NYP3 566 aa18.14■□□□□ 0.49
MCF2L-221ENST00000469415 B4GALT3O60512 393 aa18.13■□□□□ 0.49
MCF2L-221ENST00000469415 GJB3O75712 270 aa18.13■□□□□ 0.49
MCF2L-221ENST00000469415 ODC1P11926 461 aa18.13■□□□□ 0.49
MCF2L-221ENST00000469415 GABRB3P28472 473 aa18.13■□□□□ 0.49
MCF2L-221ENST00000469415 SERPINB6P35237 376 aa18.13■□□□□ 0.49
MCF2L-221ENST00000469415 PRPSAP1Q14558 356 aa18.13■□□□□ 0.49
MCF2L-221ENST00000469415 ITPRIPL1Q6GPH6 555 aa18.13■□□□□ 0.49
MCF2L-221ENST00000469415 FRMD7Q6ZUT3 714 aa18.13■□□□□ 0.49
MCF2L-221ENST00000469415 TMEM135Q86UB9 458 aa18.13■□□□□ 0.49
MCF2L-221ENST00000469415 ZNF280BQ86YH2 543 aa18.13■□□□□ 0.49
MCF2L-221ENST00000469415 SPATA2LQ8IUW3 424 aaPredicted RBP18.13■□□□□ 0.49
MCF2L-221ENST00000469415 ARHGAP24Q8N264 748 aa18.13■□□□□ 0.49
MCF2L-221ENST00000469415 TTC9BQ8N6N2 239 aa18.13■□□□□ 0.49
MCF2L-221ENST00000469415 EXT2Q93063 718 aa18.13■□□□□ 0.49
MCF2L-221ENST00000469415 DMAP1Q9NPF5 467 aaPredicted RBP18.13■□□□□ 0.49
MCF2L-221ENST00000469415 CASS4Q9NQ75 786 aa18.13■□□□□ 0.49
MCF2L-221ENST00000469415 PIRTP0C851 137 aa18.13■□□□□ 0.49
MCF2L-221ENST00000469415 TCN1P20061 433 aaPredicted RBP18.13■□□□□ 0.49
MCF2L-221ENST00000469415 VHLP40337 213 aa18.13■□□□□ 0.49
MCF2L-221ENST00000469415 COPAP53621 1224 aa18.13■□□□□ 0.49
MCF2L-221ENST00000469415 CRHR2Q13324 411 aa18.13■□□□□ 0.49
MCF2L-221ENST00000469415 TUBB3Q13509 450 aa18.13■□□□□ 0.49
MCF2L-221ENST00000469415 NXNL1Q96CM4 212 aa18.13■□□□□ 0.49
MCF2L-221ENST00000469415 ACE2Q9BYF1 805 aaPredicted RBP18.13■□□□□ 0.49
MCF2L-221ENST00000469415 EIF2B3Q9NR50 452 aaKnown RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms