RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 OR52K1Q8NGK4 314 aa9.52□□□□□ -0.89
SMC1A-205ENST00000469129 PHOSPHO2Q8TCD6 241 aa9.52□□□□□ -0.89
SMC1A-205ENST00000469129 USP33Q8TEY7 942 aa9.52□□□□□ -0.89
SMC1A-205ENST00000469129 MRPS31Q92665 395 aaKnown RBP9.52□□□□□ -0.89
SMC1A-205ENST00000469129 IGSF8Q969P0 613 aa9.52□□□□□ -0.89
SMC1A-205ENST00000469129 MRRFQ96E11 262 aaKnown RBP9.52□□□□□ -0.89
SMC1A-205ENST00000469129 HMCESQ96FZ2 354 aa9.52□□□□□ -0.89
SMC1A-205ENST00000469129 CHMP6Q96FZ7 201 aa9.52□□□□□ -0.89
SMC1A-205ENST00000469129 APOPT1Q96IL0 206 aa9.52□□□□□ -0.89
SMC1A-205ENST00000469129 RAD9AQ99638 391 aa9.52□□□□□ -0.89
SMC1A-205ENST00000469129 GORASP1Q9BQQ3 440 aa9.52□□□□□ -0.89
SMC1A-205ENST00000469129 SLC25A51Q9H1U9 297 aa9.52□□□□□ -0.89
SMC1A-205ENST00000469129 MAGEH1Q9H213 219 aa9.52□□□□□ -0.89
SMC1A-205ENST00000469129 ENTPD7Q9NQZ7 604 aa9.52□□□□□ -0.89
SMC1A-205ENST00000469129 RBM22Q9NW64 420 aaKnown RBP eCLIP9.52□□□□□ -0.89
SMC1A-205ENST00000469129 TXNDC16Q9P2K2 825 aa9.52□□□□□ -0.89
SMC1A-205ENST00000469129 LSM7Q9UK45 103 aaKnown RBP9.52□□□□□ -0.89
SMC1A-205ENST00000469129 COLQQ9Y215 455 aaPredicted RBP9.52□□□□□ -0.89
SMC1A-205ENST00000469129 SLC4A7Q9Y6M7 1214 aa9.52□□□□□ -0.89
SMC1A-205ENST00000469129 LILRB3O75022 631 aa9.51□□□□□ -0.89
SMC1A-205ENST00000469129 FAM155BO75949 473 aa9.51□□□□□ -0.89
SMC1A-205ENST00000469129 STC2O76061 302 aa9.51□□□□□ -0.89
SMC1A-205ENST00000469129 CNTN5O94779 1100 aa9.51□□□□□ -0.89
SMC1A-205ENST00000469129 GLUD1P00367 558 aa9.51□□□□□ -0.89
SMC1A-205ENST00000469129 C1RP00736 705 aa9.51□□□□□ -0.89
SMC1A-205ENST00000469129 C1QAP02745 245 aa9.51□□□□□ -0.89
SMC1A-205ENST00000469129 CTNNB1P35222 781 aa9.51□□□□□ -0.89
SMC1A-205ENST00000469129 GRIA1P42261 906 aa9.51□□□□□ -0.89
SMC1A-205ENST00000469129 KCNQ1P51787 676 aa9.51□□□□□ -0.89
SMC1A-205ENST00000469129 MGAT5Q09328 741 aa9.51□□□□□ -0.89
SMC1A-205ENST00000469129 NIPAL4Q0D2K0 466 aa9.51□□□□□ -0.89
SMC1A-205ENST00000469129 DNAJC3Q13217 504 aa9.51□□□□□ -0.89
SMC1A-205ENST00000469129 SERINC3Q13530 473 aa9.51□□□□□ -0.89
SMC1A-205ENST00000469129 ZNF235Q14590 738 aa9.51□□□□□ -0.89
SMC1A-205ENST00000469129 RFTN1Q14699 578 aaPredicted RBP9.51□□□□□ -0.89
SMC1A-205ENST00000469129 SLC14A2Q15849 920 aa9.51□□□□□ -0.89
SMC1A-205ENST00000469129 ALFQ53S48 1182 aa9.51□□□□□ -0.89
SMC1A-205ENST00000469129 FAM133BQ5BKY9 247 aaKnown RBP9.51□□□□□ -0.89
SMC1A-205ENST00000469129 ADGRF1Q5T601 910 aa9.51□□□□□ -0.89
SMC1A-205ENST00000469129 HHATQ5VTY9 493 aa9.51□□□□□ -0.89
SMC1A-205ENST00000469129 NADSYN1Q6IA69 706 aa9.51□□□□□ -0.89
SMC1A-205ENST00000469129 ZNF783Q6ZMS7 281 aa9.51□□□□□ -0.89
SMC1A-205ENST00000469129 TMC7Q7Z402 723 aa9.51□□□□□ -0.89
SMC1A-205ENST00000469129 DNAJB7Q7Z6W7 309 aaPredicted RBP9.51□□□□□ -0.89
SMC1A-205ENST00000469129 CPLX4Q7Z7G2 160 aa9.51□□□□□ -0.89
SMC1A-205ENST00000469129 SETD3Q86TU7 594 aaPredicted RBP9.51□□□□□ -0.89
SMC1A-205ENST00000469129 TAX1BP1Q86VP1 789 aa9.51□□□□□ -0.89
SMC1A-205ENST00000469129 DENND1CQ8IV53 801 aa9.51□□□□□ -0.89
SMC1A-205ENST00000469129 MPP5Q8N3R9 675 aa9.51□□□□□ -0.89
SMC1A-205ENST00000469129 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.51□□□□□ -0.89
SMC1A-205ENST00000469129 HJURPQ8NCD3 748 aaPredicted RBP9.51□□□□□ -0.89
SMC1A-205ENST00000469129 IPMKQ8NFU5 416 aa9.51□□□□□ -0.89
SMC1A-205ENST00000469129 GABPB2Q8TAK5 448 aaPredicted RBP9.51□□□□□ -0.89
SMC1A-205ENST00000469129 ZSCAN18Q8TBC5 510 aaPredicted RBP9.51□□□□□ -0.89
SMC1A-205ENST00000469129 MDM1Q8TC05 714 aa9.51□□□□□ -0.89
SMC1A-205ENST00000469129 ZNF473Q8WTR7 871 aaKnown RBP9.51□□□□□ -0.89
SMC1A-205ENST00000469129 MZB1Q8WU39 189 aa9.51□□□□□ -0.89
SMC1A-205ENST00000469129 AUTS2Q8WXX7 1259 aa9.51□□□□□ -0.89
SMC1A-205ENST00000469129 HERVK_113Q902F9 699 aa9.51□□□□□ -0.89
SMC1A-205ENST00000469129 BADQ92934 168 aa9.51□□□□□ -0.89
SMC1A-205ENST00000469129 ZNF669Q96BR6 464 aaPredicted RBP9.51□□□□□ -0.89
SMC1A-205ENST00000469129 PABPC5Q96DU9 382 aaKnown RBP9.51□□□□□ -0.89
SMC1A-205ENST00000469129 CERS2Q96G23 380 aa9.51□□□□□ -0.89
SMC1A-205ENST00000469129 MAGEB18Q96M61 343 aa9.51□□□□□ -0.89
SMC1A-205ENST00000469129 KLF16Q9BXK1 252 aaPredicted RBP9.51□□□□□ -0.89
SMC1A-205ENST00000469129 PRKD2Q9BZL6 878 aa9.51□□□□□ -0.89
SMC1A-205ENST00000469129 IQCGQ9H095 443 aaKnown RBP9.51□□□□□ -0.89
SMC1A-205ENST00000469129 NOL6Q9H6R4 1146 aaKnown RBP9.51□□□□□ -0.89
SMC1A-205ENST00000469129 MRM3Q9HC36 420 aaKnown RBP9.51□□□□□ -0.89
SMC1A-205ENST00000469129 NDFIP2Q9NV92 336 aa9.51□□□□□ -0.89
SMC1A-205ENST00000469129 MKS1Q9NXB0 559 aa9.51□□□□□ -0.89
SMC1A-205ENST00000469129 MOCS1Q9NZB8 636 aa9.51□□□□□ -0.89
SMC1A-205ENST00000469129 ZFATQ9P243 1243 aa9.51□□□□□ -0.89
SMC1A-205ENST00000469129 PCDH10Q9P2E7 1040 aa9.51□□□□□ -0.89
SMC1A-205ENST00000469129 ZNF212Q9UDV6 495 aa9.51□□□□□ -0.89
SMC1A-205ENST00000469129 SOX13Q9UN79 622 aa9.51□□□□□ -0.89
SMC1A-205ENST00000469129 ZNF510Q9Y2H8 683 aa9.51□□□□□ -0.89
SMC1A-205ENST00000469129 IRAK3Q9Y616 596 aa9.51□□□□□ -0.89
SMC1A-205ENST00000469129 RPS6KL1Q9Y6S9 549 aa9.51□□□□□ -0.89
SMC1A-205ENST00000469129 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.5□□□□□ -0.89
SMC1A-205ENST00000469129 ILVBLA1L0T0 632 aa9.5□□□□□ -0.89
SMC1A-205ENST00000469129 TRIM49D1C9J1S8 452 aa9.5□□□□□ -0.89
SMC1A-205ENST00000469129 EBAG9O00559 213 aa9.5□□□□□ -0.89
SMC1A-205ENST00000469129 TGM5O43548 720 aa9.5□□□□□ -0.89
SMC1A-205ENST00000469129 TLL1O43897 1013 aa9.5□□□□□ -0.89
SMC1A-205ENST00000469129 PRAMEF11O60813 436 aa9.5□□□□□ -0.89
SMC1A-205ENST00000469129 OLFM2O95897 454 aa9.5□□□□□ -0.89
SMC1A-205ENST00000469129 C8AP07357 584 aa9.5□□□□□ -0.89
SMC1A-205ENST00000469129 RHOCP08134 193 aa9.5□□□□□ -0.89
SMC1A-205ENST00000469129 CNPP09543 421 aaKnown RBP9.5□□□□□ -0.89
SMC1A-205ENST00000469129 ALADP13716 330 aa9.5□□□□□ -0.89
SMC1A-205ENST00000469129 KRT4P19013 534 aa9.5□□□□□ -0.89
SMC1A-205ENST00000469129 PAMP19021 973 aa9.5□□□□□ -0.89
SMC1A-205ENST00000469129 SLC6A4P31645 630 aa9.5□□□□□ -0.89
SMC1A-205ENST00000469129 MAGEA10P43363 369 aaPredicted RBP9.5□□□□□ -0.89
SMC1A-205ENST00000469129 OXCT1P55809 520 aa9.5□□□□□ -0.89
SMC1A-205ENST00000469129 GNA12Q03113 381 aa9.5□□□□□ -0.89
SMC1A-205ENST00000469129 LBRQ14739 615 aaKnown RBP9.5□□□□□ -0.89
SMC1A-205ENST00000469129 TMEM240Q5SV17 173 aa9.5□□□□□ -0.89
SMC1A-205ENST00000469129 GKAP1Q5VSY0 366 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms