RNA–Protein interactions for RNA: ENST00000469123.5

SSBP1-208, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-208ENST00000469123 RAD51Q06609 339 aa8.74□□□□□ -1.01
SSBP1-208ENST00000469123 SIM2Q14190 667 aaPredicted RBP8.74□□□□□ -1.01
SSBP1-208ENST00000469123 GRM3Q14832 879 aa8.74□□□□□ -1.01
SSBP1-208ENST00000469123 DLG2Q15700 870 aa8.74□□□□□ -1.01
SSBP1-208ENST00000469123 KCNT1Q5JUK3 1230 aa8.74□□□□□ -1.01
SSBP1-208ENST00000469123 C9orf64Q5T6V5 341 aa8.74□□□□□ -1.01
SSBP1-208ENST00000469123 AFMIDQ63HM1 303 aa8.74□□□□□ -1.01
SSBP1-208ENST00000469123 HEATR6Q6AI08 1181 aaKnown RBP8.74□□□□□ -1.01
SSBP1-208ENST00000469123 LAIR1Q6GTX8 287 aa8.74□□□□□ -1.01
SSBP1-208ENST00000469123 KIAA1211LQ6NV74 962 aa8.74□□□□□ -1.01
SSBP1-208ENST00000469123 C22orf39Q6P5X5 142 aa8.74□□□□□ -1.01
SSBP1-208ENST00000469123 KIAA1324Q6UXG2 1013 aaKnown RBP8.74□□□□□ -1.01
SSBP1-208ENST00000469123 ZNF662Q6ZS27 426 aa8.74□□□□□ -1.01
SSBP1-208ENST00000469123 CEP68Q76N32 757 aa8.74□□□□□ -1.01
SSBP1-208ENST00000469123 BZW1Q7L1Q6 419 aaKnown RBP8.74□□□□□ -1.01
SSBP1-208ENST00000469123 RABEPKQ7Z6M1 372 aa8.74□□□□□ -1.01
SSBP1-208ENST00000469123 DAAM2Q86T65 1068 aa8.74□□□□□ -1.01
SSBP1-208ENST00000469123 LRRC8AQ8IWT6 810 aa8.74□□□□□ -1.01
SSBP1-208ENST00000469123 BBS5Q8N3I7 341 aa8.74□□□□□ -1.01
SSBP1-208ENST00000469123 GPR161Q8N6U8 529 aaKnown RBP8.74□□□□□ -1.01
SSBP1-208ENST00000469123 OR7D4Q8NG98 312 aa8.74□□□□□ -1.01
SSBP1-208ENST00000469123 OR52K2Q8NGK3 314 aa8.74□□□□□ -1.01
SSBP1-208ENST00000469123 FRS2Q8WU20 508 aa8.74□□□□□ -1.01
SSBP1-208ENST00000469123 TSC1Q92574 1164 aa8.74□□□□□ -1.01
SSBP1-208ENST00000469123 FAF2Q96CS3 445 aa8.74□□□□□ -1.01
SSBP1-208ENST00000469123 LRIG1Q96JA1 1093 aa8.74□□□□□ -1.01
SSBP1-208ENST00000469123 ZC3H10Q96K80 434 aaKnown RBP8.74□□□□□ -1.01
SSBP1-208ENST00000469123 ZNF830Q96NB3 372 aaPredicted RBP8.74□□□□□ -1.01
SSBP1-208ENST00000469123 ZNF599Q96NL3 588 aa8.74□□□□□ -1.01
SSBP1-208ENST00000469123 CSPG4P5Q96PW8 444 aa8.74□□□□□ -1.01
SSBP1-208ENST00000469123 LRRC19Q9H756 370 aa8.74□□□□□ -1.01
SSBP1-208ENST00000469123 PCDH18Q9HCL0 1135 aa8.74□□□□□ -1.01
SSBP1-208ENST00000469123 C2orf42Q9NWW7 574 aa8.74□□□□□ -1.01
SSBP1-208ENST00000469123 GMEB2Q9UKD1 530 aa8.74□□□□□ -1.01
SSBP1-208ENST00000469123 NCKAP1Q9Y2A7 1128 aa8.74□□□□□ -1.01
SSBP1-208ENST00000469123 PCDHGA5Q9Y5G8 931 aa8.74□□□□□ -1.01
SSBP1-208ENST00000469123 RALGAPA1Q6GYQ0 2036 aa8.74□□□□□ -1.01
SSBP1-208ENST00000469123 PI4KAP42356 2102 aa8.74□□□□□ -1.01
SSBP1-208ENST00000469123 GPR179Q6PRD1 2367 aa8.73□□□□□ -1.01
SSBP1-208ENST00000469123 TMEM110-MUSTN1A8MSY1 372 aa8.73□□□□□ -1.01
SSBP1-208ENST00000469123 WASH3PC4AMC7 463 aa8.73□□□□□ -1.01
SSBP1-208ENST00000469123 MCF2LO15068 1137 aa8.73□□□□□ -1.01
SSBP1-208ENST00000469123 SLC7A4O43246 635 aa8.73□□□□□ -1.01
SSBP1-208ENST00000469123 BUB1BO60566 1050 aaPredicted RBP8.73□□□□□ -1.01
SSBP1-208ENST00000469123 SNAP91O60641 907 aa8.73□□□□□ -1.01
SSBP1-208ENST00000469123 SIN3BO75182 1162 aa8.73□□□□□ -1.01
SSBP1-208ENST00000469123 ZNF189O75820 626 aaPredicted RBP8.73□□□□□ -1.01
SSBP1-208ENST00000469123 GSRP00390 522 aa8.73□□□□□ -1.01
SSBP1-208ENST00000469123 CCDC175P0C221 793 aa8.73□□□□□ -1.01
SSBP1-208ENST00000469123 SRCP12931 536 aa8.73□□□□□ -1.01
SSBP1-208ENST00000469123 HLA-EP13747 358 aa8.73□□□□□ -1.01
SSBP1-208ENST00000469123 C5AR1P21730 350 aa8.73□□□□□ -1.01
SSBP1-208ENST00000469123 COMTP21964 271 aa8.73□□□□□ -1.01
SSBP1-208ENST00000469123 HOXD12P35452 270 aa8.73□□□□□ -1.01
SSBP1-208ENST00000469123 HSPA9P38646 679 aaKnown RBP8.73□□□□□ -1.01
SSBP1-208ENST00000469123 CETN2P41208 172 aa8.73□□□□□ -1.01
SSBP1-208ENST00000469123 CTSOP43234 321 aaPredicted RBP8.73□□□□□ -1.01
SSBP1-208ENST00000469123 MAPK8P45983 427 aa8.73□□□□□ -1.01
SSBP1-208ENST00000469123 RENBPP51606 427 aa8.73□□□□□ -1.01
SSBP1-208ENST00000469123 ARSEP51690 589 aa8.73□□□□□ -1.01
SSBP1-208ENST00000469123 COPAP53621 1224 aa8.73□□□□□ -1.01
SSBP1-208ENST00000469123 COPS2P61201 443 aa8.73□□□□□ -1.01
SSBP1-208ENST00000469123 SNRPD1P62314 119 aaKnown RBP8.73□□□□□ -1.01
SSBP1-208ENST00000469123 DPYSL3Q14195 570 aa8.73□□□□□ -1.01
SSBP1-208ENST00000469123 CA9Q16790 459 aa8.73□□□□□ -1.01
SSBP1-208ENST00000469123 MAP7D1Q3KQU3 841 aa8.73□□□□□ -1.01
SSBP1-208ENST00000469123 ACCSLQ4AC99 568 aa8.73□□□□□ -1.01
SSBP1-208ENST00000469123 TIGD7Q6NT04 549 aaPredicted RBP8.73□□□□□ -1.01
SSBP1-208ENST00000469123 LPCAT2Q7L5N7 544 aa8.73□□□□□ -1.01
SSBP1-208ENST00000469123 ZSCAN30Q86W11 494 aa8.73□□□□□ -1.01
SSBP1-208ENST00000469123 ZNF354CQ86Y25 554 aa8.73□□□□□ -1.01
SSBP1-208ENST00000469123 TMIEQ8NEW7 156 aa8.73□□□□□ -1.01
SSBP1-208ENST00000469123 TPCN2Q8NHX9 752 aa8.73□□□□□ -1.01
SSBP1-208ENST00000469123 KIAA1524Q8TCG1 905 aa8.73□□□□□ -1.01
SSBP1-208ENST00000469123 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.73□□□□□ -1.01
SSBP1-208ENST00000469123 NSMCE1Q8WV22 266 aa8.73□□□□□ -1.01
SSBP1-208ENST00000469123 PTPRN2Q92932 1015 aa8.73□□□□□ -1.01
SSBP1-208ENST00000469123 FOXJ1Q92949 421 aa8.73□□□□□ -1.01
SSBP1-208ENST00000469123 PPP1R16AQ96I34 528 aa8.73□□□□□ -1.01
SSBP1-208ENST00000469123 RBM41Q96IZ5 413 aaKnown RBP8.73□□□□□ -1.01
SSBP1-208ENST00000469123 RPL10LQ96L21 214 aaKnown RBP8.73□□□□□ -1.01
SSBP1-208ENST00000469123 CALN1Q9BXU9 219 aa8.73□□□□□ -1.01
SSBP1-208ENST00000469123 OSBPL1AQ9BXW6 950 aa8.73□□□□□ -1.01
SSBP1-208ENST00000469123 MAK16Q9BXY0 300 aaKnown RBP8.73□□□□□ -1.01
SSBP1-208ENST00000469123 SGK2Q9HBY8 427 aa8.73□□□□□ -1.01
SSBP1-208ENST00000469123 ITM2CQ9NQX7 267 aa8.73□□□□□ -1.01
SSBP1-208ENST00000469123 GPATCH2LQ9NWQ4 482 aa8.73□□□□□ -1.01
SSBP1-208ENST00000469123 UBA2Q9UBT2 640 aaPredicted RBP8.73□□□□□ -1.01
SSBP1-208ENST00000469123 SLCO3A1Q9UIG8 710 aa8.73□□□□□ -1.01
SSBP1-208ENST00000469123 FZD4Q9ULV1 537 aa8.73□□□□□ -1.01
SSBP1-208ENST00000469123 SMG5Q9UPR3 1016 aaKnown RBP8.73□□□□□ -1.01
SSBP1-208ENST00000469123 ALG6Q9Y672 507 aa8.73□□□□□ -1.01
SSBP1-208ENST00000469123 CACNA1EQ15878 2313 aa8.72□□□□□ -1.01
SSBP1-208ENST00000469123 CEP192Q8TEP8 1941 aa8.72□□□□□ -1.01
SSBP1-208ENST00000469123 CCDC66A2RUB6 948 aa8.72□□□□□ -1.01
SSBP1-208ENST00000469123 LRRD1A4D1F6 860 aa8.72□□□□□ -1.01
SSBP1-208ENST00000469123 TTC34A8MYJ7 566 aa8.72□□□□□ -1.01
SSBP1-208ENST00000469123 MIF4GDA9UHW6 222 aaKnown RBP8.72□□□□□ -1.01
SSBP1-208ENST00000469123 MAP3K13O43283 966 aa8.72□□□□□ -1.01
SSBP1-208ENST00000469123 HRO43593 1189 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms