RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 MPP5Q8N3R9 675 aa19.34■□□□□ 0.69
SMC4-209ENST00000468653 OR52K1Q8NGK4 314 aa19.34■□□□□ 0.69
SMC4-209ENST00000468653 TLCD1Q96CP7 247 aa19.34■□□□□ 0.69
SMC4-209ENST00000468653 OXNAD1Q96HP4 312 aaPredicted RBP19.34■□□□□ 0.69
SMC4-209ENST00000468653 PIH1D1Q9NWS0 290 aaKnown RBP19.34■□□□□ 0.69
SMC4-209ENST00000468653 ZNF510Q9Y2H8 683 aa19.34■□□□□ 0.69
SMC4-209ENST00000468653 LAMA2P24043 3122 aaKnown RBP19.33■□□□□ 0.69
SMC4-209ENST00000468653 A0A0D9SEW6 157 aa19.33■□□□□ 0.68
SMC4-209ENST00000468653 TBL1XO60907 577 aa19.33■□□□□ 0.68
SMC4-209ENST00000468653 DDX6P26196 483 aaKnown RBP eCLIP19.33■□□□□ 0.68
SMC4-209ENST00000468653 MGAT1P26572 445 aa19.33■□□□□ 0.68
SMC4-209ENST00000468653 ATP5DP30049 168 aa19.33■□□□□ 0.68
SMC4-209ENST00000468653 HPDP32754 393 aaPredicted RBP19.33■□□□□ 0.68
SMC4-209ENST00000468653 KLHL38Q2WGJ6 581 aa19.33■□□□□ 0.68
SMC4-209ENST00000468653 ZNF697Q5TEC3 545 aa19.33■□□□□ 0.68
SMC4-209ENST00000468653 IL31Q6EBC2 164 aa19.33■□□□□ 0.68
SMC4-209ENST00000468653 HTR3DQ70Z44 454 aa19.33■□□□□ 0.68
SMC4-209ENST00000468653 SETD3Q86TU7 594 aaPredicted RBP19.33■□□□□ 0.68
SMC4-209ENST00000468653 DNAAF3Q8N9W5 541 aa19.33■□□□□ 0.68
SMC4-209ENST00000468653 LEMD2Q8NC56 503 aa19.33■□□□□ 0.68
SMC4-209ENST00000468653 OR7D4Q8NG98 312 aa19.33■□□□□ 0.68
SMC4-209ENST00000468653 SPATA22Q8NHS9 363 aa19.33■□□□□ 0.68
SMC4-209ENST00000468653 TCEAL4Q96EI5 215 aa19.33■□□□□ 0.68
SMC4-209ENST00000468653 TMA16Q96EY4 203 aaKnown RBP19.33■□□□□ 0.68
SMC4-209ENST00000468653 STAMBPL1Q96FJ0 436 aa19.33■□□□□ 0.68
SMC4-209ENST00000468653 XPO6Q96QU8 1125 aaKnown RBP19.33■□□□□ 0.68
SMC4-209ENST00000468653 SPON2Q9BUD6 331 aa19.33■□□□□ 0.68
SMC4-209ENST00000468653 ACSS3Q9H6R3 686 aa19.33■□□□□ 0.68
SMC4-209ENST00000468653 PPCSQ9HAB8 311 aa19.33■□□□□ 0.68
SMC4-209ENST00000468653 NT5MQ9NPB1 228 aa19.33■□□□□ 0.68
SMC4-209ENST00000468653 MSRAQ9UJ68 235 aa19.33■□□□□ 0.68
SMC4-209ENST00000468653 GBF1Q92538 1859 aa19.33■□□□□ 0.68
SMC4-209ENST00000468653 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.32■□□□□ 0.68
SMC4-209ENST00000468653 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.32■□□□□ 0.68
SMC4-209ENST00000468653 ILVBLA1L0T0 632 aa19.32■□□□□ 0.68
SMC4-209ENST00000468653 PRAMEF11O60813 436 aa19.32■□□□□ 0.68
SMC4-209ENST00000468653 USP12O75317 370 aa19.32■□□□□ 0.68
SMC4-209ENST00000468653 GSTA2P09210 222 aa19.32■□□□□ 0.68
SMC4-209ENST00000468653 IFNAR2P48551 515 aa19.32■□□□□ 0.68
SMC4-209ENST00000468653 GEMP55040 296 aa19.32■□□□□ 0.68
SMC4-209ENST00000468653 ITKQ08881 620 aa19.32■□□□□ 0.68
SMC4-209ENST00000468653 SLC10A7Q0GE19 358 aa19.32■□□□□ 0.68
SMC4-209ENST00000468653 OLIG2Q13516 323 aa19.32■□□□□ 0.68
SMC4-209ENST00000468653 TEAD2Q15562 447 aa19.32■□□□□ 0.68
SMC4-209ENST00000468653 NAPEPLDQ6IQ20 393 aa19.32■□□□□ 0.68
SMC4-209ENST00000468653 RIBC1Q8N443 379 aaPredicted RBP19.32■□□□□ 0.68
SMC4-209ENST00000468653 HJURPQ8NCD3 748 aaPredicted RBP19.32■□□□□ 0.68
SMC4-209ENST00000468653 PBX4Q9BYU1 374 aa19.32■□□□□ 0.68
SMC4-209ENST00000468653 NKX2-4Q9H2Z4 354 aa19.32■□□□□ 0.68
SMC4-209ENST00000468653 ZDHHC7Q9NXF8 308 aa19.32■□□□□ 0.68
SMC4-209ENST00000468653 CTNNAL1Q9UBT7 734 aa19.32■□□□□ 0.68
SMC4-209ENST00000468653 TBK1Q9UHD2 729 aa19.32■□□□□ 0.68
SMC4-209ENST00000468653 HCFC2Q9Y5Z7 792 aa19.32■□□□□ 0.68
SMC4-209ENST00000468653 DENND4CQ5VZ89 1909 aa19.32■□□□□ 0.68
SMC4-209ENST00000468653 LEFTY2O00292 366 aa19.32■□□□□ 0.68
SMC4-209ENST00000468653 STX2P32856 288 aa19.32■□□□□ 0.68
SMC4-209ENST00000468653 AVPR1AP37288 418 aa19.32■□□□□ 0.68
SMC4-209ENST00000468653 ETFBP38117 255 aa19.32■□□□□ 0.68
SMC4-209ENST00000468653 GEMIN4P57678 1058 aaKnown RBP19.32■□□□□ 0.68
SMC4-209ENST00000468653 LBRQ14739 615 aaKnown RBP19.32■□□□□ 0.68
SMC4-209ENST00000468653 TMCO4Q5TGY1 634 aa19.32■□□□□ 0.68
SMC4-209ENST00000468653 LEKR1Q6ZMV7 388 aa19.32■□□□□ 0.68
SMC4-209ENST00000468653 ADGRD2Q7Z7M1 963 aa19.32■□□□□ 0.68
SMC4-209ENST00000468653 LINC00523Q86TU6 105 aa19.32■□□□□ 0.68
SMC4-209ENST00000468653 OR52K2Q8NGK3 314 aa19.32■□□□□ 0.68
SMC4-209ENST00000468653 ARNTL2Q8WYA1 636 aa19.32■□□□□ 0.68
SMC4-209ENST00000468653 MRRFQ96E11 262 aaKnown RBP19.32■□□□□ 0.68
SMC4-209ENST00000468653 CYTH2Q99418 400 aa19.32■□□□□ 0.68
SMC4-209ENST00000468653 PRKD2Q9BZL6 878 aa19.32■□□□□ 0.68
SMC4-209ENST00000468653 SMG9Q9H0W8 520 aaKnown RBP19.32■□□□□ 0.68
SMC4-209ENST00000468653 TASP1Q9H6P5 420 aa19.32■□□□□ 0.68
SMC4-209ENST00000468653 TLE6Q9H808 572 aa19.32■□□□□ 0.68
SMC4-209ENST00000468653 CASS4Q9NQ75 786 aa19.32■□□□□ 0.68
SMC4-209ENST00000468653 ARHGAP26Q9UNA1 814 aa19.32■□□□□ 0.68
SMC4-209ENST00000468653 TBC1D30Q9Y2I9 924 aa19.32■□□□□ 0.68
SMC4-209ENST00000468653 CCDC195A0A1B0GUA6 201 aa19.31■□□□□ 0.68
SMC4-209ENST00000468653 TCRBV9S1A1TA0A576 114 aa19.31■□□□□ 0.68
SMC4-209ENST00000468653 H0Y626 953 aa19.31■□□□□ 0.68
SMC4-209ENST00000468653 AP3B1O00203 1094 aa19.31■□□□□ 0.68
SMC4-209ENST00000468653 MT-CYBP00156 380 aaPredicted RBP19.31■□□□□ 0.68
SMC4-209ENST00000468653 NUMBP49757 651 aa19.31■□□□□ 0.68
SMC4-209ENST00000468653 OXCT1P55809 520 aa19.31■□□□□ 0.68
SMC4-209ENST00000468653 CRADDP78560 199 aa19.31■□□□□ 0.68
SMC4-209ENST00000468653 PPP2R2DQ66LE6 453 aa19.31■□□□□ 0.68
SMC4-209ENST00000468653 KDM7AQ6ZMT4 941 aa19.31■□□□□ 0.68
SMC4-209ENST00000468653 UNC5AQ6ZN44 842 aa19.31■□□□□ 0.68
SMC4-209ENST00000468653 TDRPQ86YL5 185 aa19.31■□□□□ 0.68
SMC4-209ENST00000468653 CCNJLQ8IV13 435 aa19.31■□□□□ 0.68
SMC4-209ENST00000468653 KLHDC8BQ8IXV7 354 aa19.31■□□□□ 0.68
SMC4-209ENST00000468653 CMTM8Q8IZV2 173 aa19.31■□□□□ 0.68
SMC4-209ENST00000468653 CARNMT1Q8N4J0 409 aa19.31■□□□□ 0.68
SMC4-209ENST00000468653 TEX26Q8N6G2 289 aa19.31■□□□□ 0.68
SMC4-209ENST00000468653 ARFGAP2Q8N6H7 521 aa19.31■□□□□ 0.68
SMC4-209ENST00000468653 APOL2Q9BQE5 337 aa19.31■□□□□ 0.68
SMC4-209ENST00000468653 SLC25A51Q9H1U9 297 aa19.31■□□□□ 0.68
SMC4-209ENST00000468653 BFARQ9NZS9 450 aa19.31■□□□□ 0.68
SMC4-209ENST00000468653 SAMD15Q9P1V8 674 aa19.31■□□□□ 0.68
SMC4-209ENST00000468653 LGALS13Q9UHV8 139 aa19.31■□□□□ 0.68
SMC4-209ENST00000468653 SLC24A2Q9UI40 661 aa19.31■□□□□ 0.68
SMC4-209ENST00000468653 GCAP28676 217 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms