RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 NUSAP1Q9BXS6 441 aaKnown RBP14.85□□□□□ -0.03
COL27A1-203ENST00000468565 PCED1AQ9H1Q7 454 aa14.85□□□□□ -0.03
COL27A1-203ENST00000468565 ANKZF1Q9H8Y5 726 aa14.85□□□□□ -0.03
COL27A1-203ENST00000468565 RYDENQ9NUL5 291 aaKnown RBP14.85□□□□□ -0.03
COL27A1-203ENST00000468565 RAB21Q9UL25 225 aa14.85□□□□□ -0.03
COL27A1-203ENST00000468565 SCML1Q9UN30 329 aa14.85□□□□□ -0.03
COL27A1-203ENST00000468565 JRKLQ9Y4A0 524 aa14.85□□□□□ -0.03
COL27A1-203ENST00000468565 SIN3BO75182 1162 aa14.84□□□□□ -0.03
COL27A1-203ENST00000468565 SEC31AO94979 1220 aaKnown RBP14.84□□□□□ -0.03
COL27A1-203ENST00000468565 DNTTP04053 509 aa14.84□□□□□ -0.03
COL27A1-203ENST00000468565 ATP11AP98196 1134 aa14.84□□□□□ -0.03
COL27A1-203ENST00000468565 ASIC2Q16515 512 aa14.84□□□□□ -0.03
COL27A1-203ENST00000468565 ASTE1Q2TB18 679 aaPredicted RBP14.84□□□□□ -0.03
COL27A1-203ENST00000468565 TTC31Q49AM3 519 aaPredicted RBP14.84□□□□□ -0.03
COL27A1-203ENST00000468565 WDR45BQ5MNZ6 344 aa14.84□□□□□ -0.03
COL27A1-203ENST00000468565 HGSNATQ68CP4 663 aa14.84□□□□□ -0.03
COL27A1-203ENST00000468565 IL31Q6EBC2 164 aa14.84□□□□□ -0.03
COL27A1-203ENST00000468565 ACAD10Q6JQN1 1059 aa14.84□□□□□ -0.03
COL27A1-203ENST00000468565 SETD3Q86TU7 594 aaPredicted RBP14.84□□□□□ -0.03
COL27A1-203ENST00000468565 HNRNPLLQ8WVV9 542 aaKnown RBP14.84□□□□□ -0.03
COL27A1-203ENST00000468565 CENPIQ92674 756 aaPredicted RBP14.84□□□□□ -0.03
COL27A1-203ENST00000468565 GPR174Q9BXC1 333 aa14.84□□□□□ -0.03
COL27A1-203ENST00000468565 OR51B4Q9Y5P0 310 aa14.84□□□□□ -0.03
COL27A1-203ENST00000468565 TCRBV5S1A1TA0A578 114 aa14.84□□□□□ -0.03
COL27A1-203ENST00000468565 SIGLEC16A6NMB1 481 aa14.84□□□□□ -0.03
COL27A1-203ENST00000468565 TTC34A8MYJ7 566 aa14.84□□□□□ -0.03
COL27A1-203ENST00000468565 E9PAM4 449 aa14.84□□□□□ -0.03
COL27A1-203ENST00000468565 RNASEH1O60930 286 aaKnown RBP14.84□□□□□ -0.03
COL27A1-203ENST00000468565 CNTN5O94779 1100 aa14.84□□□□□ -0.03
COL27A1-203ENST00000468565 IRX4P78413 519 aa14.84□□□□□ -0.03
COL27A1-203ENST00000468565 C15orf59Q2T9L4 293 aaPredicted RBP14.84□□□□□ -0.03
COL27A1-203ENST00000468565 ARL13BQ3SXY8 428 aa14.84□□□□□ -0.03
COL27A1-203ENST00000468565 ALFQ53S48 1182 aa14.84□□□□□ -0.03
COL27A1-203ENST00000468565 C9orf64Q5T6V5 341 aa14.84□□□□□ -0.03
COL27A1-203ENST00000468565 PHLDB2Q86SQ0 1253 aa14.84□□□□□ -0.03
COL27A1-203ENST00000468565 OR52K2Q8NGK3 314 aa14.84□□□□□ -0.03
COL27A1-203ENST00000468565 DNASE2BQ8WZ79 361 aa14.84□□□□□ -0.03
COL27A1-203ENST00000468565 RPL10LQ96L21 214 aaKnown RBP14.84□□□□□ -0.03
COL27A1-203ENST00000468565 MTG2Q9H4K7 406 aa14.84□□□□□ -0.03
COL27A1-203ENST00000468565 TMPRSS4Q9NRS4 437 aa14.84□□□□□ -0.03
COL27A1-203ENST00000468565 AIPL1Q9NZN9 384 aa14.84□□□□□ -0.03
COL27A1-203ENST00000468565 SUSD2Q9UGT4 822 aa14.84□□□□□ -0.03
COL27A1-203ENST00000468565 SLCO3A1Q9UIG8 710 aa14.84□□□□□ -0.03
COL27A1-203ENST00000468565 SLC25A13Q9UJS0 675 aa14.84□□□□□ -0.03
COL27A1-203ENST00000468565 SNX10Q9Y5X0 201 aa14.84□□□□□ -0.03
COL27A1-203ENST00000468565 DUSP10Q9Y6W6 482 aa14.84□□□□□ -0.03
COL27A1-203ENST00000468565 ASCC3Q8N3C0 2202 aaKnown RBP14.84□□□□□ -0.03
COL27A1-203ENST00000468565 CNOT1A5YKK6 2376 aaKnown RBP14.83□□□□□ -0.03
COL27A1-203ENST00000468565 DCDC2BA2VCK2 349 aa14.83□□□□□ -0.04
COL27A1-203ENST00000468565 TM4SF5O14894 197 aa14.83□□□□□ -0.04
COL27A1-203ENST00000468565 GJB6O95452 261 aa14.83□□□□□ -0.04
COL27A1-203ENST00000468565 RHOCP08134 193 aa14.83□□□□□ -0.04
COL27A1-203ENST00000468565 SERPINF2P08697 491 aa14.83□□□□□ -0.04
COL27A1-203ENST00000468565 RHOXF2BP0C7M4 288 aa14.83□□□□□ -0.04
COL27A1-203ENST00000468565 GPD1P21695 349 aa14.83□□□□□ -0.04
COL27A1-203ENST00000468565 RFC1P35251 1148 aaPredicted RBP14.83□□□□□ -0.04
COL27A1-203ENST00000468565 PRKCIP41743 596 aa14.83□□□□□ -0.04
COL27A1-203ENST00000468565 STK19P49842 368 aaPredicted RBP14.83□□□□□ -0.04
COL27A1-203ENST00000468565 NRG1Q02297 640 aaPredicted RBP14.83□□□□□ -0.04
COL27A1-203ENST00000468565 SFSWAPQ12872 951 aaKnown RBP14.83□□□□□ -0.04
COL27A1-203ENST00000468565 CDO1Q16878 200 aa14.83□□□□□ -0.04
COL27A1-203ENST00000468565 ARTNQ5T4W7 220 aa14.83□□□□□ -0.04
COL27A1-203ENST00000468565 USP30Q70CQ3 517 aa14.83□□□□□ -0.04
COL27A1-203ENST00000468565 RNF10Q8N5U6 811 aaKnown RBP14.83□□□□□ -0.04
COL27A1-203ENST00000468565 PTPRN2Q92932 1015 aa14.83□□□□□ -0.04
COL27A1-203ENST00000468565 VCPIP1Q96JH7 1222 aa14.83□□□□□ -0.04
COL27A1-203ENST00000468565 RHOXF2Q9BQY4 288 aa14.83□□□□□ -0.04
COL27A1-203ENST00000468565 CAPN10Q9HC96 672 aa14.83□□□□□ -0.04
COL27A1-203ENST00000468565 TMEM9BQ9NQ34 198 aa14.83□□□□□ -0.04
COL27A1-203ENST00000468565 PPARGC1AQ9UBK2 798 aaKnown RBP14.83□□□□□ -0.04
COL27A1-203ENST00000468565 VPS28Q9UK41 221 aa14.83□□□□□ -0.04
COL27A1-203ENST00000468565 SLC6A14Q9UN76 642 aa14.83□□□□□ -0.04
COL27A1-203ENST00000468565 TP53BP1Q12888 1972 aaPredicted RBP14.82□□□□□ -0.04
COL27A1-203ENST00000468565 METTL12A8MUP2 240 aa14.82□□□□□ -0.04
COL27A1-203ENST00000468565 MEI4A8MW99 385 aa14.82□□□□□ -0.04
COL27A1-203ENST00000468565 PRLRP16471 622 aa14.82□□□□□ -0.04
COL27A1-203ENST00000468565 TNFAIP3P21580 790 aa14.82□□□□□ -0.04
COL27A1-203ENST00000468565 MCM3P25205 808 aa14.82□□□□□ -0.04
COL27A1-203ENST00000468565 ADRA1BP35368 520 aa14.82□□□□□ -0.04
COL27A1-203ENST00000468565 GFPT1Q06210 699 aaPredicted RBP14.82□□□□□ -0.04
COL27A1-203ENST00000468565 KLHL30Q0D2K2 578 aa14.82□□□□□ -0.04
COL27A1-203ENST00000468565 LONRF2Q1L5Z9 754 aa14.82□□□□□ -0.04
COL27A1-203ENST00000468565 C6orf118Q5T5N4 469 aa14.82□□□□□ -0.04
COL27A1-203ENST00000468565 DNAJC24Q6P3W2 148 aa14.82□□□□□ -0.04
COL27A1-203ENST00000468565 ZNF783Q6ZMS7 281 aa14.82□□□□□ -0.04
COL27A1-203ENST00000468565 HOMEZQ8IX15 550 aa14.82□□□□□ -0.04
COL27A1-203ENST00000468565 RGL4Q8IZJ4 473 aa14.82□□□□□ -0.04
COL27A1-203ENST00000468565 MCOLN2Q8IZK6 566 aa14.82□□□□□ -0.04
COL27A1-203ENST00000468565 ZYG11BQ9C0D3 744 aa14.82□□□□□ -0.04
COL27A1-203ENST00000468565 MUC3BQ9H195 1237 aa14.82□□□□□ -0.04
COL27A1-203ENST00000468565 PABPC3Q9H361 631 aaKnown RBP14.82□□□□□ -0.04
COL27A1-203ENST00000468565 SGK2Q9HBY8 427 aa14.82□□□□□ -0.04
COL27A1-203ENST00000468565 ATP9BO43861 1147 aa14.82□□□□□ -0.04
COL27A1-203ENST00000468565 GNSP15586 552 aa14.82□□□□□ -0.04
COL27A1-203ENST00000468565 HDAC4P56524 1084 aa14.82□□□□□ -0.04
COL27A1-203ENST00000468565 ELAVL3Q14576 367 aaKnown RBP14.82□□□□□ -0.04
COL27A1-203ENST00000468565 PPP1R15BQ5SWA1 713 aa14.82□□□□□ -0.04
COL27A1-203ENST00000468565 SH3PXD2AQ5TCZ1 1133 aa14.82□□□□□ -0.04
COL27A1-203ENST00000468565 DCAF12L1Q5VU92 463 aa14.82□□□□□ -0.04
COL27A1-203ENST00000468565 FRS2Q8WU20 508 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms