RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 ACVRL1P37023 503 aa8.44□□□□□ -1.06
BRCA1-208ENST00000468300 NTHL1P78549 312 aa8.44□□□□□ -1.06
BRCA1-208ENST00000468300 TSNAXIP1Q2TAA8 658 aa8.44□□□□□ -1.06
BRCA1-208ENST00000468300 PABPC1LQ4VXU2 614 aaKnown RBP8.44□□□□□ -1.06
BRCA1-208ENST00000468300 ADGRF1Q5T601 910 aa8.44□□□□□ -1.06
BRCA1-208ENST00000468300 CFAP58Q5T655 872 aa8.44□□□□□ -1.06
BRCA1-208ENST00000468300 ACBD5Q5T8D3 534 aaPredicted RBP8.44□□□□□ -1.06
BRCA1-208ENST00000468300 CXorf57Q6NSI4 855 aaKnown RBP8.44□□□□□ -1.06
BRCA1-208ENST00000468300 C4orf22Q6V702 233 aa8.44□□□□□ -1.06
BRCA1-208ENST00000468300 MPP5Q8N3R9 675 aa8.44□□□□□ -1.06
BRCA1-208ENST00000468300 PGBD5Q8N414 524 aa8.44□□□□□ -1.06
BRCA1-208ENST00000468300 MCUQ8NE86 351 aa8.44□□□□□ -1.06
BRCA1-208ENST00000468300 OXNAD1Q96HP4 312 aaPredicted RBP8.44□□□□□ -1.06
BRCA1-208ENST00000468300 NSMCE3Q96MG7 304 aa8.44□□□□□ -1.06
BRCA1-208ENST00000468300 ZSWIM3Q96MP5 696 aa8.44□□□□□ -1.06
BRCA1-208ENST00000468300 SAMD11Q96NU1 681 aa8.44□□□□□ -1.06
BRCA1-208ENST00000468300 TMBIM4Q9HC24 238 aa8.44□□□□□ -1.06
BRCA1-208ENST00000468300 TRPC7Q9HCX4 862 aa8.44□□□□□ -1.06
BRCA1-208ENST00000468300 COL4A3Q01955 1670 aa8.43□□□□□ -1.06
BRCA1-208ENST00000468300 RASA4BC9J798 803 aa8.43□□□□□ -1.06
BRCA1-208ENST00000468300 RASA4O43374 803 aa8.43□□□□□ -1.06
BRCA1-208ENST00000468300 RHOP08100 348 aa8.43□□□□□ -1.06
BRCA1-208ENST00000468300 MBL2P11226 248 aaPredicted RBP8.43□□□□□ -1.06
BRCA1-208ENST00000468300 HDCP19113 662 aa8.43□□□□□ -1.06
BRCA1-208ENST00000468300 MX2P20592 715 aa8.43□□□□□ -1.06
BRCA1-208ENST00000468300 HOXD9P28356 352 aaPredicted RBP8.43□□□□□ -1.06
BRCA1-208ENST00000468300 OAS2P29728 719 aaKnown RBP8.43□□□□□ -1.06
BRCA1-208ENST00000468300 HARS2P49590 506 aaKnown RBP8.43□□□□□ -1.06
BRCA1-208ENST00000468300 SH3BGRP55822 239 aaPredicted RBP8.43□□□□□ -1.06
BRCA1-208ENST00000468300 SMAD3P84022 425 aaKnown RBP8.43□□□□□ -1.06
BRCA1-208ENST00000468300 SERINC3Q13530 473 aa8.43□□□□□ -1.06
BRCA1-208ENST00000468300 PARP6Q2NL67 630 aa8.43□□□□□ -1.06
BRCA1-208ENST00000468300 PPM1LQ5SGD2 360 aa8.43□□□□□ -1.06
BRCA1-208ENST00000468300 OTOP3Q7RTS5 596 aa8.43□□□□□ -1.06
BRCA1-208ENST00000468300 CHSY1Q86X52 802 aa8.43□□□□□ -1.06
BRCA1-208ENST00000468300 TEX26Q8N6G2 289 aa8.43□□□□□ -1.06
BRCA1-208ENST00000468300 GDPD5Q8WTR4 605 aa8.43□□□□□ -1.06
BRCA1-208ENST00000468300 ARHGEF2Q92974 986 aaKnown RBP8.43□□□□□ -1.06
BRCA1-208ENST00000468300 TADA1Q96BN2 335 aa8.43□□□□□ -1.06
BRCA1-208ENST00000468300 SIGLEC10Q96LC7 697 aa8.43□□□□□ -1.06
BRCA1-208ENST00000468300 RPRD1AQ96P16 312 aaPredicted RBP8.43□□□□□ -1.06
BRCA1-208ENST00000468300 TRIM56Q9BRZ2 755 aaKnown RBP8.43□□□□□ -1.06
BRCA1-208ENST00000468300 TMEM109Q9BVC6 243 aa8.43□□□□□ -1.06
BRCA1-208ENST00000468300 GBA3Q9H227 469 aa8.43□□□□□ -1.06
BRCA1-208ENST00000468300 SAYSD1Q9NPB0 183 aa8.43□□□□□ -1.06
BRCA1-208ENST00000468300 EIF2B3Q9NR50 452 aaKnown RBP8.43□□□□□ -1.06
BRCA1-208ENST00000468300 SEPT10Q9P0V9 454 aa8.43□□□□□ -1.06
BRCA1-208ENST00000468300 SLC12A6Q9UHW9 1150 aa8.43□□□□□ -1.06
BRCA1-208ENST00000468300 ACTL7AQ9Y615 435 aa8.43□□□□□ -1.06
BRCA1-208ENST00000468300 MYO7AQ13402 2215 aa8.43□□□□□ -1.06
BRCA1-208ENST00000468300 SUN1O94901 812 aa8.43□□□□□ -1.06
BRCA1-208ENST00000468300 ACSL3O95573 720 aa8.43□□□□□ -1.06
BRCA1-208ENST00000468300 CD160O95971 181 aa8.43□□□□□ -1.06
BRCA1-208ENST00000468300 APRTP07741 180 aa8.43□□□□□ -1.06
BRCA1-208ENST00000468300 MMP2P08253 660 aa8.43□□□□□ -1.06
BRCA1-208ENST00000468300 POU2F2P09086 479 aa8.43□□□□□ -1.06
BRCA1-208ENST00000468300 CCNB1P14635 433 aa8.43□□□□□ -1.06
BRCA1-208ENST00000468300 PDIA2Q13087 525 aaKnown RBP8.43□□□□□ -1.06
BRCA1-208ENST00000468300 HIF1AQ16665 826 aa8.43□□□□□ -1.06
BRCA1-208ENST00000468300 FSCBQ5H9T9 825 aa8.43□□□□□ -1.06
BRCA1-208ENST00000468300 PDE12Q6L8Q7 609 aaKnown RBP8.43□□□□□ -1.06
BRCA1-208ENST00000468300 HTR3DQ70Z44 454 aa8.43□□□□□ -1.06
BRCA1-208ENST00000468300 PDZD4Q76G19 769 aaPredicted RBP8.43□□□□□ -1.06
BRCA1-208ENST00000468300 RBM23Q86U06 439 aaKnown RBP8.43□□□□□ -1.06
BRCA1-208ENST00000468300 ANKMY2Q8IV38 441 aa8.43□□□□□ -1.06
BRCA1-208ENST00000468300 KRT222Q8N1A0 295 aa8.43□□□□□ -1.06
BRCA1-208ENST00000468300 PDCD7Q8N8D1 485 aaKnown RBP8.43□□□□□ -1.06
BRCA1-208ENST00000468300 WFDC5Q8TCV5 224 aa8.43□□□□□ -1.06
BRCA1-208ENST00000468300 ARNTL2Q8WYA1 636 aa8.43□□□□□ -1.06
BRCA1-208ENST00000468300 SLC7A5P2Q9GIP4 190 aa8.43□□□□□ -1.06
BRCA1-208ENST00000468300 TBC1D30Q9Y2I9 924 aa8.43□□□□□ -1.06
BRCA1-208ENST00000468300 RFXAPO00287 272 aa8.42□□□□□ -1.06
BRCA1-208ENST00000468300 GJB3O75712 270 aa8.42□□□□□ -1.06
BRCA1-208ENST00000468300 LATS1O95835 1130 aa8.42□□□□□ -1.06
BRCA1-208ENST00000468300 JCHAINP01591 159 aa8.42□□□□□ -1.06
BRCA1-208ENST00000468300 HLA-DQB2P05538 268 aa8.42□□□□□ -1.06
BRCA1-208ENST00000468300 NFKB1P19838 968 aa8.42□□□□□ -1.06
BRCA1-208ENST00000468300 MAPKAPK2P49137 400 aa8.42□□□□□ -1.06
BRCA1-208ENST00000468300 TEAD2Q15562 447 aa8.42□□□□□ -1.06
BRCA1-208ENST00000468300 TAF12Q16514 161 aa8.42□□□□□ -1.06
BRCA1-208ENST00000468300 DUSP6Q16828 381 aa8.42□□□□□ -1.06
BRCA1-208ENST00000468300 ZNF697Q5TEC3 545 aa8.42□□□□□ -1.06
BRCA1-208ENST00000468300 LRRC31Q6UY01 552 aa8.42□□□□□ -1.06
BRCA1-208ENST00000468300 LMNTD2Q8IXW0 634 aa8.42□□□□□ -1.06
BRCA1-208ENST00000468300 ZBED8Q8IZ13 594 aa8.42□□□□□ -1.06
BRCA1-208ENST00000468300 EPS8L3Q8TE67 593 aaKnown RBP8.42□□□□□ -1.06
BRCA1-208ENST00000468300 ALG14Q96F25 216 aa8.42□□□□□ -1.06
BRCA1-208ENST00000468300 AGAP3Q96P47 875 aa8.42□□□□□ -1.06
BRCA1-208ENST00000468300 NACA2Q9H009 215 aa8.42□□□□□ -1.06
BRCA1-208ENST00000468300 PRO3102Q9H379 93 aa8.42□□□□□ -1.06
BRCA1-208ENST00000468300 ATXN3LQ9H3M9 355 aa8.42□□□□□ -1.06
BRCA1-208ENST00000468300 PLSCR2Q9NRY7 297 aa8.42□□□□□ -1.06
BRCA1-208ENST00000468300 UBAP1Q9NZ09 502 aa8.42□□□□□ -1.06
BRCA1-208ENST00000468300 CLEC4EQ9ULY5 219 aa8.42□□□□□ -1.06
BRCA1-208ENST00000468300 OR51B4Q9Y5P0 310 aa8.42□□□□□ -1.06
BRCA1-208ENST00000468300 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.42□□□□□ -1.06
BRCA1-208ENST00000468300 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.42□□□□□ -1.06
BRCA1-208ENST00000468300 F5H5T6 163 aa8.42□□□□□ -1.06
BRCA1-208ENST00000468300 MUSKO15146 869 aa8.42□□□□□ -1.06
BRCA1-208ENST00000468300 TCEA3O75764 348 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms