RNA–Protein interactions for RNA: ENST00000467353.1

CPS1-205, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 323 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-205ENST00000467353 ITGA11Q9UKX5 1188 aa4.41□□□□□ -1.7
CPS1-205ENST00000467353 DMTF1Q9Y222 760 aa4.41□□□□□ -1.7
CPS1-205ENST00000467353 ABCA2Q9BZC7 2435 aa4.41□□□□□ -1.7
CPS1-205ENST00000467353 ZNF638Q14966 1978 aaKnown RBP4.4□□□□□ -1.7
CPS1-205ENST00000467353 ARID1BQ8NFD5 2236 aaPredicted RBP4.4□□□□□ -1.7
CPS1-205ENST00000467353 A0A1W2PNR3 127 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 A0A1W2PQ27 194 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 A0A1W2PQ64 194 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 A0A1W2PQC6 194 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 A0A1W2PQH9 124 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 TTC34A8MYJ7 566 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 K7ENM7 598 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 SLC31A1O15431 190 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 RNASEH1O60930 286 aaKnown RBP4.4□□□□□ -1.71
CPS1-205ENST00000467353 CDKL5O76039 1030 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 CST3P01034 146 aaPredicted RBP4.4□□□□□ -1.71
CPS1-205ENST00000467353 LDLRP01130 860 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 CYBBP04839 570 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 ATP5BP06576 529 aaKnown RBP4.4□□□□□ -1.71
CPS1-205ENST00000467353 JMJD7P0C870 316 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 PABPC1P11940 636 aaKnown RBP4.4□□□□□ -1.71
CPS1-205ENST00000467353 LIFP15018 202 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 PRLRP16471 622 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 CORO1AP31146 461 aaKnown RBP4.4□□□□□ -1.71
CPS1-205ENST00000467353 SLC6A4P31645 630 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 CD70P32970 193 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 DRD3P35462 400 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 PSMD8P48556 350 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 GYS2P54840 703 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 CLDN2P57739 230 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 CCL7P80098 99 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 GTF2BQ00403 316 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 EIF3IQ13347 325 aaKnown RBP4.4□□□□□ -1.71
CPS1-205ENST00000467353 MRPL49Q13405 166 aaKnown RBP4.4□□□□□ -1.71
CPS1-205ENST00000467353 SPIDRQ14159 915 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 MPP2Q14168 576 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 LRRC14Q15048 493 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 NR0B2Q15466 257 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 ZRSR1Q15695 479 aaKnown RBP4.4□□□□□ -1.71
CPS1-205ENST00000467353 DEFB133Q30KQ1 61 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 HNRNPA1L2Q32P51 320 aaKnown RBP4.4□□□□□ -1.71
CPS1-205ENST00000467353 LACTB2Q53H82 288 aaPredicted RBP4.4□□□□□ -1.71
CPS1-205ENST00000467353 RPS26P11Q5JNZ5 115 aaPredicted RBP4.4□□□□□ -1.71
CPS1-205ENST00000467353 EFHC2Q5JST6 749 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 KLHDC10Q6PID8 442 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 RUFY3Q7L099 469 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 SV2AQ7L0J3 742 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 DYMQ7RTS9 669 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 GPRIN1Q7Z2K8 1008 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 LYSMD3Q7Z3D4 306 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 TMPRSS9Q7Z410 1059 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 SCD5Q86SK9 330 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 NLRP8Q86W28 1048 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 SLC35F3Q8IY50 421 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 FUKQ8N0W3 1084 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 MMP21Q8N119 569 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 SLC34A3Q8N130 599 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 SLC22A18ASQ8N1D0 253 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 ZNF276Q8N554 614 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.4□□□□□ -1.71
CPS1-205ENST00000467353 TEX19Q8NA77 164 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 TMEM145Q8NBT3 493 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 B3GALNT2Q8NCR0 500 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 ZNF548Q8NEK5 533 aaPredicted RBP4.4□□□□□ -1.71
CPS1-205ENST00000467353 OR13H1Q8NG92 308 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 OR5B17Q8NGF7 314 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 WFIKKN2Q8TEU8 576 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 POMGNT1Q8WZA1 660 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 KLK6Q92876 244 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 SAAL1Q96ER3 474 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 MRGPRX3Q96LB0 322 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 MYOCQ99972 504 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 CCDC3Q9BQI4 270 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 REEP2Q9BRK0 252 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 TRIM56Q9BRZ2 755 aaKnown RBP4.4□□□□□ -1.71
CPS1-205ENST00000467353 MED10Q9BTT4 135 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 DUSP23Q9BVJ7 150 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 CALN1Q9BXU9 219 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 MTMR12Q9C0I1 747 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 STRADBQ9C0K7 418 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 RBSNQ9H1K0 784 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 SYNDIG1Q9H7V2 258 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 BRMS1Q9HCU9 246 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 PRDM8Q9NQV8 689 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.4□□□□□ -1.71
CPS1-205ENST00000467353 DNAJC28Q9NX36 388 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 NCKIPSDQ9NZQ3 722 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 SLCO3A1Q9UIG8 710 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 ERRFI1Q9UJM3 462 aaPredicted RBP4.4□□□□□ -1.71
CPS1-205ENST00000467353 SALL4Q9UJQ4 1053 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 GGA2Q9UJY4 613 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 ITGB1BP2Q9UKP3 347 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 TPX2Q9ULW0 747 aaKnown RBP4.4□□□□□ -1.71
CPS1-205ENST00000467353 PPT2Q9UMR5 302 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 SCML2Q9UQR0 700 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 TP53TG5Q9Y2B4 290 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 TLR6Q9Y2C9 796 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 ZNF510Q9Y2H8 683 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 LOXL2Q9Y4K0 774 aa4.4□□□□□ -1.71
CPS1-205ENST00000467353 ANAPC1Q9H1A4 1944 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms