RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 SMAD6O43541 496 aaKnown RBP11.28□□□□□ -0.6
MSH5-212ENST00000467319 KDELR3O43731 214 aa11.28□□□□□ -0.6
MSH5-212ENST00000467319 SPOPO43791 374 aa11.28□□□□□ -0.6
MSH5-212ENST00000467319 MFSD11O43934 449 aa11.28□□□□□ -0.6
MSH5-212ENST00000467319 PRAMEF11O60813 436 aa11.28□□□□□ -0.6
MSH5-212ENST00000467319 RPP40O75818 363 aaKnown RBP11.28□□□□□ -0.6
MSH5-212ENST00000467319 AMPD1P23109 780 aa11.28□□□□□ -0.6
MSH5-212ENST00000467319 NOP2P46087 812 aaKnown RBP11.28□□□□□ -0.6
MSH5-212ENST00000467319 MARCKSL1P49006 195 aa11.28□□□□□ -0.6
MSH5-212ENST00000467319 GEMIN4P57678 1058 aaKnown RBP11.28□□□□□ -0.6
MSH5-212ENST00000467319 RPS14P62263 151 aaKnown RBP11.28□□□□□ -0.6
MSH5-212ENST00000467319 ZBTB16Q05516 673 aa11.28□□□□□ -0.6
MSH5-212ENST00000467319 SLC20A2Q08357 652 aa11.28□□□□□ -0.6
MSH5-212ENST00000467319 MMRN1Q13201 1228 aa11.28□□□□□ -0.6
MSH5-212ENST00000467319 KRT81Q14533 505 aa11.28□□□□□ -0.6
MSH5-212ENST00000467319 DLG2Q15700 870 aa11.28□□□□□ -0.6
MSH5-212ENST00000467319 ZNF776Q68DI1 518 aaPredicted RBP11.28□□□□□ -0.6
MSH5-212ENST00000467319 NCBP2-AS2Q69YL0 99 aa11.28□□□□□ -0.6
MSH5-212ENST00000467319 IL31Q6EBC2 164 aa11.28□□□□□ -0.6
MSH5-212ENST00000467319 TMCO3Q6UWJ1 677 aa11.28□□□□□ -0.6
MSH5-212ENST00000467319 KIAA1328Q86T90 577 aa11.28□□□□□ -0.6
MSH5-212ENST00000467319 TMPRSS6Q8IU80 811 aa11.28□□□□□ -0.6
MSH5-212ENST00000467319 RHOT1Q8IXI2 618 aa11.28□□□□□ -0.6
MSH5-212ENST00000467319 TXLNBQ8N3L3 684 aa11.28□□□□□ -0.6
MSH5-212ENST00000467319 LZTR1Q8N653 840 aa11.28□□□□□ -0.6
MSH5-212ENST00000467319 PQLC3Q8N755 202 aa11.28□□□□□ -0.6
MSH5-212ENST00000467319 ATP11CQ8NB49 1132 aa11.28□□□□□ -0.6
MSH5-212ENST00000467319 SUMF1Q8NBK3 374 aa11.28□□□□□ -0.6
MSH5-212ENST00000467319 OR2A12Q8NGT7 310 aa11.28□□□□□ -0.6
MSH5-212ENST00000467319 FAM131CQ96AQ9 280 aa11.28□□□□□ -0.6
MSH5-212ENST00000467319 VOPP1Q96AW1 172 aa11.28□□□□□ -0.6
MSH5-212ENST00000467319 ISG20Q96AZ6 181 aaKnown RBP11.28□□□□□ -0.6
MSH5-212ENST00000467319 ERLEC1Q96DZ1 483 aa11.28□□□□□ -0.6
MSH5-212ENST00000467319 CELF6Q96J87 481 aaKnown RBP11.28□□□□□ -0.6
MSH5-212ENST00000467319 PHOX2BQ99453 314 aa11.28□□□□□ -0.6
MSH5-212ENST00000467319 SPON2Q9BUD6 331 aa11.28□□□□□ -0.6
MSH5-212ENST00000467319 SLC39A8Q9C0K1 460 aa11.28□□□□□ -0.6
MSH5-212ENST00000467319 SEMA4AQ9H3S1 761 aa11.28□□□□□ -0.6
MSH5-212ENST00000467319 PRDM16Q9HAZ2 1276 aa11.28□□□□□ -0.6
MSH5-212ENST00000467319 CD93Q9NPY3 652 aa11.28□□□□□ -0.6
MSH5-212ENST00000467319 BCCIPQ9P287 314 aaKnown RBP eCLIP11.28□□□□□ -0.6
MSH5-212ENST00000467319 SUN2Q9UH99 717 aa11.28□□□□□ -0.6
MSH5-212ENST00000467319 SMG5Q9UPR3 1016 aaKnown RBP11.28□□□□□ -0.6
MSH5-212ENST00000467319 ALG6Q9Y672 507 aa11.28□□□□□ -0.6
MSH5-212ENST00000467319 SPAG17Q6Q759 2223 aa11.28□□□□□ -0.6
MSH5-212ENST00000467319 TNRC6BQ9UPQ9 1833 aaKnown RBP11.28□□□□□ -0.6
MSH5-212ENST00000467319 IGHV1OR15-9A0A0B4J2B8 117 aa11.27□□□□□ -0.61
MSH5-212ENST00000467319 LRRD1A4D1F6 860 aa11.27□□□□□ -0.61
MSH5-212ENST00000467319 DAPK3O43293 454 aa11.27□□□□□ -0.61
MSH5-212ENST00000467319 BUB1O43683 1085 aa11.27□□□□□ -0.61
MSH5-212ENST00000467319 KRT1P04264 644 aa11.27□□□□□ -0.61
MSH5-212ENST00000467319 BCKDHBP21953 392 aa11.27□□□□□ -0.61
MSH5-212ENST00000467319 CTNNA1P35221 906 aaKnown RBP11.27□□□□□ -0.61
MSH5-212ENST00000467319 SERPINB6P35237 376 aa11.27□□□□□ -0.61
MSH5-212ENST00000467319 NNMTP40261 264 aa11.27□□□□□ -0.61
MSH5-212ENST00000467319 KIF5AQ12840 1032 aa11.27□□□□□ -0.61
MSH5-212ENST00000467319 PAFAH1B3Q15102 231 aaKnown RBP11.27□□□□□ -0.61
MSH5-212ENST00000467319 CST6Q15828 149 aa11.27□□□□□ -0.61
MSH5-212ENST00000467319 ANKRD20A8PQ5CZ79 823 aa11.27□□□□□ -0.61
MSH5-212ENST00000467319 KIAA1324Q6UXG2 1013 aaKnown RBP11.27□□□□□ -0.61
MSH5-212ENST00000467319 ZNF662Q6ZS27 426 aa11.27□□□□□ -0.61
MSH5-212ENST00000467319 DAAM2Q86T65 1068 aa11.27□□□□□ -0.61
MSH5-212ENST00000467319 C11orf74Q86VG3 221 aa11.27□□□□□ -0.61
MSH5-212ENST00000467319 MAP7D3Q8IWC1 876 aa11.27□□□□□ -0.61
MSH5-212ENST00000467319 TP53INP2Q8IXH6 220 aa11.27□□□□□ -0.61
MSH5-212ENST00000467319 PLPP6Q8IY26 295 aa11.27□□□□□ -0.61
MSH5-212ENST00000467319 KATNAL2Q8IYT4 538 aa11.27□□□□□ -0.61
MSH5-212ENST00000467319 PCDH20Q8N6Y1 951 aaKnown RBP11.27□□□□□ -0.61
MSH5-212ENST00000467319 CASKIN2Q8WXE0 1202 aa11.27□□□□□ -0.61
MSH5-212ENST00000467319 KRT35Q92764 455 aa11.27□□□□□ -0.61
MSH5-212ENST00000467319 SIPA1Q96FS4 1042 aa11.27□□□□□ -0.61
MSH5-212ENST00000467319 ZC3H10Q96K80 434 aaKnown RBP11.27□□□□□ -0.61
MSH5-212ENST00000467319 SPACA7Q96KW9 195 aa11.27□□□□□ -0.61
MSH5-212ENST00000467319 FAM129BQ96TA1 746 aa11.27□□□□□ -0.61
MSH5-212ENST00000467319 CALN1Q9BXU9 219 aa11.27□□□□□ -0.61
MSH5-212ENST00000467319 DDX56Q9NY93 547 aaKnown RBP11.27□□□□□ -0.61
MSH5-212ENST00000467319 MBD1Q9UIS9 605 aaPredicted RBP11.27□□□□□ -0.61
MSH5-212ENST00000467319 ACTL7AQ9Y615 435 aa11.27□□□□□ -0.61
MSH5-212ENST00000467319 CAPN6Q9Y6Q1 641 aa11.27□□□□□ -0.61
MSH5-212ENST00000467319 RIF1Q5UIP0 2472 aaKnown RBP11.26□□□□□ -0.61
MSH5-212ENST00000467319 MACROD2A1Z1Q3 448 aa11.26□□□□□ -0.61
MSH5-212ENST00000467319 ARHGAP42A6NI28 874 aa11.26□□□□□ -0.61
MSH5-212ENST00000467319 C10orf142B7Z368 130 aa11.26□□□□□ -0.61
MSH5-212ENST00000467319 MCF2LO15068 1137 aa11.26□□□□□ -0.61
MSH5-212ENST00000467319 ZNF217O75362 1048 aa11.26□□□□□ -0.61
MSH5-212ENST00000467319 TMCC1O94876 653 aa11.26□□□□□ -0.61
MSH5-212ENST00000467319 PEX11BO96011 259 aa11.26□□□□□ -0.61
MSH5-212ENST00000467319 GSRP00390 522 aa11.26□□□□□ -0.61
MSH5-212ENST00000467319 KDELR1P24390 212 aa11.26□□□□□ -0.61
MSH5-212ENST00000467319 PLA2G5P39877 138 aa11.26□□□□□ -0.61
MSH5-212ENST00000467319 CDKN2BP42772 138 aa11.26□□□□□ -0.61
MSH5-212ENST00000467319 PAPOLAP51003 745 aaKnown RBP11.26□□□□□ -0.61
MSH5-212ENST00000467319 TPMTP51580 245 aa11.26□□□□□ -0.61
MSH5-212ENST00000467319 GALNT2Q10471 571 aa11.26□□□□□ -0.61
MSH5-212ENST00000467319 GSE1Q14687 1217 aa11.26□□□□□ -0.61
MSH5-212ENST00000467319 USP39Q53GS9 565 aaKnown RBP11.26□□□□□ -0.61
MSH5-212ENST00000467319 INO80DQ53TQ3 878 aaPredicted RBP11.26□□□□□ -0.61
MSH5-212ENST00000467319 PMS2CLQ68D20 193 aa11.26□□□□□ -0.61
MSH5-212ENST00000467319 SLC9A4Q6AI14 798 aa11.26□□□□□ -0.61
MSH5-212ENST00000467319 ARHGAP36Q6ZRI8 547 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms