RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 IFT27Q9BW83 186 aa4.7□□□□□ -1.66
CDC42BPA-211ENST00000466538 ENTPD7Q9NQZ7 604 aa4.7□□□□□ -1.66
CDC42BPA-211ENST00000466538 GRHL1Q9NZI5 618 aa4.7□□□□□ -1.66
CDC42BPA-211ENST00000466538 ZNHIT2Q9UHR6 403 aa4.7□□□□□ -1.66
CDC42BPA-211ENST00000466538 SARDHQ9UL12 918 aa4.7□□□□□ -1.66
CDC42BPA-211ENST00000466538 ICKQ9UPZ9 632 aa4.7□□□□□ -1.66
CDC42BPA-211ENST00000466538 CAMK2AQ9UQM7 478 aa4.7□□□□□ -1.66
CDC42BPA-211ENST00000466538 RUSC2Q8N2Y8 1516 aa4.7□□□□□ -1.66
CDC42BPA-211ENST00000466538 KAT6AQ92794 2004 aa4.69□□□□□ -1.66
CDC42BPA-211ENST00000466538 A0A1W2PQM1 296 aa4.69□□□□□ -1.66
CDC42BPA-211ENST00000466538 ARHGAP10A1A4S6 786 aa4.69□□□□□ -1.66
CDC42BPA-211ENST00000466538 SLC22A23A1A5C7 686 aa4.69□□□□□ -1.66
CDC42BPA-211ENST00000466538 LRRC3CA6NJW4 275 aa4.69□□□□□ -1.66
CDC42BPA-211ENST00000466538 LINC01548A6NM66 108 aa4.69□□□□□ -1.66
CDC42BPA-211ENST00000466538 PRPF4O43172 522 aaKnown RBP eCLIP4.69□□□□□ -1.66
CDC42BPA-211ENST00000466538 TNFSF14O43557 240 aa4.69□□□□□ -1.66
CDC42BPA-211ENST00000466538 CEP104O60308 925 aa4.69□□□□□ -1.66
CDC42BPA-211ENST00000466538 RNASEH2AO75792 299 aaKnown RBP4.69□□□□□ -1.66
CDC42BPA-211ENST00000466538 CCNDBP1O95273 360 aa4.69□□□□□ -1.66
CDC42BPA-211ENST00000466538 SCGB1D1O95968 90 aa4.69□□□□□ -1.66
CDC42BPA-211ENST00000466538 FSHBP01225 129 aa4.69□□□□□ -1.66
CDC42BPA-211ENST00000466538 TUBB4AP04350 444 aa4.69□□□□□ -1.66
CDC42BPA-211ENST00000466538 CLEC3BP05452 202 aa4.69□□□□□ -1.66
CDC42BPA-211ENST00000466538 CERS1P27544 350 aa4.69□□□□□ -1.66
CDC42BPA-211ENST00000466538 EIF3BP55884 814 aaKnown RBP4.69□□□□□ -1.66
CDC42BPA-211ENST00000466538 EFNB1P98172 346 aa4.69□□□□□ -1.66
CDC42BPA-211ENST00000466538 SETQ01105 290 aaPredicted RBP4.69□□□□□ -1.66
CDC42BPA-211ENST00000466538 SLC10A2Q12908 348 aaPredicted RBP4.69□□□□□ -1.66
CDC42BPA-211ENST00000466538 PRKG2Q13237 762 aa4.69□□□□□ -1.66
CDC42BPA-211ENST00000466538 STIM1Q13586 685 aa4.69□□□□□ -1.66
CDC42BPA-211ENST00000466538 EIF4A2Q14240 407 aaKnown RBP4.69□□□□□ -1.66
CDC42BPA-211ENST00000466538 RPE65Q16518 533 aa4.69□□□□□ -1.66
CDC42BPA-211ENST00000466538 ARL13AQ5H913 290 aaPredicted RBP4.69□□□□□ -1.66
CDC42BPA-211ENST00000466538 GPATCH4Q5T3I0 446 aaKnown RBP4.69□□□□□ -1.66
CDC42BPA-211ENST00000466538 TTLL5Q6EMB2 1281 aa4.69□□□□□ -1.66
CDC42BPA-211ENST00000466538 ISM2Q6H9L7 571 aa4.69□□□□□ -1.66
CDC42BPA-211ENST00000466538 FBXO42Q6P3S6 717 aa4.69□□□□□ -1.66
CDC42BPA-211ENST00000466538 AAGABQ6PD74 315 aa4.69□□□□□ -1.66
CDC42BPA-211ENST00000466538 LRIG3Q6UXM1 1119 aa4.69□□□□□ -1.66
CDC42BPA-211ENST00000466538 CPLX4Q7Z7G2 160 aa4.69□□□□□ -1.66
CDC42BPA-211ENST00000466538 BOLLQ8N9W6 283 aaKnown RBP4.69□□□□□ -1.66
CDC42BPA-211ENST00000466538 ANKRD52Q8NB46 1076 aa4.69□□□□□ -1.66
CDC42BPA-211ENST00000466538 DNAAF1Q8NEP3 725 aa4.69□□□□□ -1.66
CDC42BPA-211ENST00000466538 WIPF2Q8TF74 440 aaPredicted RBP4.69□□□□□ -1.66
CDC42BPA-211ENST00000466538 FAR1Q8WVX9 515 aa4.69□□□□□ -1.66
CDC42BPA-211ENST00000466538 KIF1BPQ96EK5 621 aa4.69□□□□□ -1.66
CDC42BPA-211ENST00000466538 CHFRQ96EP1 664 aa4.69□□□□□ -1.66
CDC42BPA-211ENST00000466538 TIGD1Q96MW7 591 aa4.69□□□□□ -1.66
CDC42BPA-211ENST00000466538 AGAP2Q99490 1192 aa4.69□□□□□ -1.66
CDC42BPA-211ENST00000466538 FAM118BQ9BPY3 351 aa4.69□□□□□ -1.66
CDC42BPA-211ENST00000466538 CHCHD6Q9BRQ6 235 aa4.69□□□□□ -1.66
CDC42BPA-211ENST00000466538 SEMA4CQ9C0C4 833 aa4.69□□□□□ -1.66
CDC42BPA-211ENST00000466538 RIOX1Q9H6W3 641 aa4.69□□□□□ -1.66
CDC42BPA-211ENST00000466538 DIAPH3Q9NSV4 1193 aa4.69□□□□□ -1.66
CDC42BPA-211ENST00000466538 ATP8A2Q9NTI2 1148 aa4.69□□□□□ -1.66
CDC42BPA-211ENST00000466538 ZDHHC7Q9NXF8 308 aa4.69□□□□□ -1.66
CDC42BPA-211ENST00000466538 FBXO4Q9UKT5 387 aa4.69□□□□□ -1.66
CDC42BPA-211ENST00000466538 WDR17Q8IZU2 1322 aa4.69□□□□□ -1.66
CDC42BPA-211ENST00000466538 COL11A2P13942 1736 aaPredicted RBP4.69□□□□□ -1.66
CDC42BPA-211ENST00000466538 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.68□□□□□ -1.66
CDC42BPA-211ENST00000466538 K7ENM7 598 aa4.68□□□□□ -1.66
CDC42BPA-211ENST00000466538 CBX6O95503 412 aa4.68□□□□□ -1.66
CDC42BPA-211ENST00000466538 LATS1O95835 1130 aa4.68□□□□□ -1.66
CDC42BPA-211ENST00000466538 DDAH2O95865 285 aa4.68□□□□□ -1.66
CDC42BPA-211ENST00000466538 LDHCP07864 332 aa4.68□□□□□ -1.66
CDC42BPA-211ENST00000466538 FMO4P31512 558 aa4.68□□□□□ -1.66
CDC42BPA-211ENST00000466538 ARF3P61204 181 aaPredicted RBP4.68□□□□□ -1.66
CDC42BPA-211ENST00000466538 RPL7AP62424 266 aaKnown RBP4.68□□□□□ -1.66
CDC42BPA-211ENST00000466538 YPEL5P62699 121 aa4.68□□□□□ -1.66
CDC42BPA-211ENST00000466538 YWHAZP63104 245 aaKnown RBP4.68□□□□□ -1.66
CDC42BPA-211ENST00000466538 ARF1P84077 181 aaKnown RBP4.68□□□□□ -1.66
CDC42BPA-211ENST00000466538 CYP4A11Q02928 519 aa4.68□□□□□ -1.66
CDC42BPA-211ENST00000466538 FOXF2Q12947 444 aa4.68□□□□□ -1.66
CDC42BPA-211ENST00000466538 FOXD4Q12950 439 aaPredicted RBP4.68□□□□□ -1.66
CDC42BPA-211ENST00000466538 MAMLD1Q13495 774 aa4.68□□□□□ -1.66
CDC42BPA-211ENST00000466538 ERV3-1Q14264 604 aa4.68□□□□□ -1.66
CDC42BPA-211ENST00000466538 ZNF268Q14587 947 aaPredicted RBP4.68□□□□□ -1.66
CDC42BPA-211ENST00000466538 TMEM119Q4V9L6 283 aa4.68□□□□□ -1.66
CDC42BPA-211ENST00000466538 TTC39AQ5SRH9 613 aa4.68□□□□□ -1.66
CDC42BPA-211ENST00000466538 UBAP2Q5T6F2 1119 aaKnown RBP4.68□□□□□ -1.66
CDC42BPA-211ENST00000466538 ITPRIPL1Q6GPH6 555 aa4.68□□□□□ -1.66
CDC42BPA-211ENST00000466538 TMEM81Q6P7N7 255 aa4.68□□□□□ -1.66
CDC42BPA-211ENST00000466538 FAM57BQ71RH2 274 aa4.68□□□□□ -1.66
CDC42BPA-211ENST00000466538 B4GALNT4Q76KP1 1039 aa4.68□□□□□ -1.66
CDC42BPA-211ENST00000466538 TADA2BQ86TJ2 420 aa4.68□□□□□ -1.66
CDC42BPA-211ENST00000466538 ADGRF4Q8IZF3 695 aa4.68□□□□□ -1.66
CDC42BPA-211ENST00000466538 ADSSL1Q8N142 457 aa4.68□□□□□ -1.66
CDC42BPA-211ENST00000466538 GALNT16Q8N428 558 aa4.68□□□□□ -1.66
CDC42BPA-211ENST00000466538 TMEM217Q8N7C4 229 aa4.68□□□□□ -1.66
CDC42BPA-211ENST00000466538 METTL6Q8TCB7 284 aa4.68□□□□□ -1.66
CDC42BPA-211ENST00000466538 TMEM170AQ8WVE7 144 aa4.68□□□□□ -1.66
CDC42BPA-211ENST00000466538 FRMD8Q9BZ67 464 aaPredicted RBP4.68□□□□□ -1.66
CDC42BPA-211ENST00000466538 USP44Q9H0E7 712 aa4.68□□□□□ -1.66
CDC42BPA-211ENST00000466538 SLC25A18Q9H1K4 315 aa4.68□□□□□ -1.66
CDC42BPA-211ENST00000466538 IKZF4Q9H2S9 585 aa4.68□□□□□ -1.66
CDC42BPA-211ENST00000466538 RANBP17Q9H2T7 1088 aaKnown RBP4.68□□□□□ -1.66
CDC42BPA-211ENST00000466538 HIPK3Q9H422 1215 aa4.68□□□□□ -1.66
CDC42BPA-211ENST00000466538 MOV10Q9HCE1 1003 aaKnown RBP4.68□□□□□ -1.66
CDC42BPA-211ENST00000466538 KRT84Q9NSB2 600 aa4.68□□□□□ -1.66
CDC42BPA-211ENST00000466538 PEMTQ9UBM1 199 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms