RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 IGSF9Q9P2J2 1179 aa12.38□□□□□ -0.43
VPS16-206ENST00000466415 USP15Q9Y4E8 981 aaPredicted RBP12.38□□□□□ -0.43
VPS16-206ENST00000466415 H3BQ06 376 aaPredicted RBP12.37□□□□□ -0.43
VPS16-206ENST00000466415 ZBTB24O43167 697 aaPredicted RBP12.37□□□□□ -0.43
VPS16-206ENST00000466415 PENKP01210 267 aaPredicted RBP12.37□□□□□ -0.43
VPS16-206ENST00000466415 CYP17A1P05093 508 aa12.37□□□□□ -0.43
VPS16-206ENST00000466415 HLA-DQB2P05538 268 aa12.37□□□□□ -0.43
VPS16-206ENST00000466415 APRTP07741 180 aa12.37□□□□□ -0.43
VPS16-206ENST00000466415 LAMP2P13473 410 aa12.37□□□□□ -0.43
VPS16-206ENST00000466415 NFKB1P19838 968 aa12.37□□□□□ -0.43
VPS16-206ENST00000466415 FCARP24071 287 aa12.37□□□□□ -0.43
VPS16-206ENST00000466415 MZF1P28698 734 aaPredicted RBP12.37□□□□□ -0.43
VPS16-206ENST00000466415 ECHS1P30084 290 aa12.37□□□□□ -0.43
VPS16-206ENST00000466415 GEMIN4P57678 1058 aaKnown RBP12.37□□□□□ -0.43
VPS16-206ENST00000466415 SARNPP82979 210 aaKnown RBP12.37□□□□□ -0.43
VPS16-206ENST00000466415 ITKQ08881 620 aa12.37□□□□□ -0.43
VPS16-206ENST00000466415 NR1H3Q13133 447 aa12.37□□□□□ -0.43
VPS16-206ENST00000466415 SEMA5AQ13591 1074 aa12.37□□□□□ -0.43
VPS16-206ENST00000466415 SLC12A1Q13621 1099 aa12.37□□□□□ -0.43
VPS16-206ENST00000466415 RFTN1Q14699 578 aaPredicted RBP12.37□□□□□ -0.43
VPS16-206ENST00000466415 LBRQ14739 615 aaKnown RBP12.37□□□□□ -0.43
VPS16-206ENST00000466415 DHCR24Q15392 516 aa12.37□□□□□ -0.43
VPS16-206ENST00000466415 CCDC85BQ15834 202 aaPredicted RBP12.37□□□□□ -0.43
VPS16-206ENST00000466415 EML3Q32P44 896 aa12.37□□□□□ -0.43
VPS16-206ENST00000466415 FSCBQ5H9T9 825 aa12.37□□□□□ -0.43
VPS16-206ENST00000466415 TRIM68Q6AZZ1 485 aa12.37□□□□□ -0.43
VPS16-206ENST00000466415 TANGO2Q6ICL3 276 aa12.37□□□□□ -0.43
VPS16-206ENST00000466415 LEKR1Q6ZMV7 388 aa12.37□□□□□ -0.43
VPS16-206ENST00000466415 CPA6Q8N4T0 437 aa12.37□□□□□ -0.43
VPS16-206ENST00000466415 OR52K2Q8NGK3 314 aa12.37□□□□□ -0.43
VPS16-206ENST00000466415 FIBINQ8TAL6 211 aa12.37□□□□□ -0.43
VPS16-206ENST00000466415 WFDC5Q8TCV5 224 aa12.37□□□□□ -0.43
VPS16-206ENST00000466415 HNRNPLLQ8WVV9 542 aaKnown RBP12.37□□□□□ -0.43
VPS16-206ENST00000466415 CPT1BQ92523 772 aa12.37□□□□□ -0.43
VPS16-206ENST00000466415 PRCCQ92733 491 aaPredicted RBP12.37□□□□□ -0.43
VPS16-206ENST00000466415 ELSPBP1Q96BH3 223 aa12.37□□□□□ -0.43
VPS16-206ENST00000466415 IL12RB2Q99665 862 aa12.37□□□□□ -0.43
VPS16-206ENST00000466415 KXD1Q9BQD3 176 aa12.37□□□□□ -0.43
VPS16-206ENST00000466415 CINPQ9BW66 212 aaPredicted RBP12.37□□□□□ -0.43
VPS16-206ENST00000466415 ACE2Q9BYF1 805 aaPredicted RBP12.37□□□□□ -0.43
VPS16-206ENST00000466415 FOXP3Q9BZS1 431 aa12.37□□□□□ -0.43
VPS16-206ENST00000466415 UBE2ZQ9H832 354 aaPredicted RBP12.37□□□□□ -0.43
VPS16-206ENST00000466415 NT5MQ9NPB1 228 aa12.37□□□□□ -0.43
VPS16-206ENST00000466415 SEPT3Q9UH03 358 aa12.37□□□□□ -0.43
VPS16-206ENST00000466415 FARP1Q9Y4F1 1045 aaPredicted RBP12.37□□□□□ -0.43
VPS16-206ENST00000466415 DOCK4Q8N1I0 1966 aa12.37□□□□□ -0.43
VPS16-206ENST00000466415 NYNRINQ9P2P1 1898 aaKnown RBP12.36□□□□□ -0.43
VPS16-206ENST00000466415 PDE4DIPQ5VU43 2346 aa12.36□□□□□ -0.43
VPS16-206ENST00000466415 GOLGA8MH3BSY2 632 aa12.36□□□□□ -0.43
VPS16-206ENST00000466415 METTL18O95568 372 aa12.36□□□□□ -0.43
VPS16-206ENST00000466415 ARSAP15289 507 aa12.36□□□□□ -0.43
VPS16-206ENST00000466415 TPSB2P20231 275 aa12.36□□□□□ -0.43
VPS16-206ENST00000466415 KCNA5P22460 613 aa12.36□□□□□ -0.43
VPS16-206ENST00000466415 SP100P23497 879 aaPredicted RBP12.36□□□□□ -0.43
VPS16-206ENST00000466415 ARL4CP56559 192 aa12.36□□□□□ -0.43
VPS16-206ENST00000466415 SMAD4Q13485 552 aaKnown RBP12.36□□□□□ -0.43
VPS16-206ENST00000466415 GRM2Q14416 872 aa12.36□□□□□ -0.43
VPS16-206ENST00000466415 KCNJ11Q14654 390 aa12.36□□□□□ -0.43
VPS16-206ENST00000466415 SLMAPQ14BN4 828 aa12.36□□□□□ -0.43
VPS16-206ENST00000466415 TPSAB1Q15661 275 aa12.36□□□□□ -0.43
VPS16-206ENST00000466415 FAM182AQ5T1J6 154 aa12.36□□□□□ -0.43
VPS16-206ENST00000466415 SYCP2LQ5T4T6 812 aa12.36□□□□□ -0.43
VPS16-206ENST00000466415 ANKRD22Q5VYY1 191 aa12.36□□□□□ -0.43
VPS16-206ENST00000466415 RNF43Q68DV7 783 aa12.36□□□□□ -0.43
VPS16-206ENST00000466415 RETSATQ6NUM9 610 aa12.36□□□□□ -0.43
VPS16-206ENST00000466415 VITQ6UXI7 678 aa12.36□□□□□ -0.43
VPS16-206ENST00000466415 MFSD6LQ8IWD5 586 aa12.36□□□□□ -0.43
VPS16-206ENST00000466415 ZCCHC9Q8N567 271 aaKnown RBP12.36□□□□□ -0.43
VPS16-206ENST00000466415 NAT8LQ8N9F0 302 aa12.36□□□□□ -0.43
VPS16-206ENST00000466415 ST13P5Q8NFI4 369 aaPredicted RBP12.36□□□□□ -0.43
VPS16-206ENST00000466415 PPM1EQ8WY54 764 aa12.36□□□□□ -0.43
VPS16-206ENST00000466415 CAVIN3Q969G5 261 aa12.36□□□□□ -0.43
VPS16-206ENST00000466415 ZFYVE19Q96K21 471 aa12.36□□□□□ -0.43
VPS16-206ENST00000466415 GDAP1L1Q96MZ0 367 aa12.36□□□□□ -0.43
VPS16-206ENST00000466415 LRRC3BQ96PB8 259 aa12.36□□□□□ -0.43
VPS16-206ENST00000466415 CDX2Q99626 313 aaPredicted RBP12.36□□□□□ -0.43
VPS16-206ENST00000466415 FEM1AQ9BSK4 669 aa12.36□□□□□ -0.43
VPS16-206ENST00000466415 SLC2A11Q9BYW1 496 aa12.36□□□□□ -0.43
VPS16-206ENST00000466415 FRMD8Q9BZ67 464 aaPredicted RBP12.36□□□□□ -0.43
VPS16-206ENST00000466415 EBF3Q9H4W6 596 aa12.36□□□□□ -0.43
VPS16-206ENST00000466415 PDFQ9HBH1 243 aa12.36□□□□□ -0.43
VPS16-206ENST00000466415 GLOD4Q9HC38 313 aa12.36□□□□□ -0.43
VPS16-206ENST00000466415 EIF2B3Q9NR50 452 aaKnown RBP12.36□□□□□ -0.43
VPS16-206ENST00000466415 ABCB8Q9NUT2 735 aa12.36□□□□□ -0.43
VPS16-206ENST00000466415 GGA2Q9UJY4 613 aa12.36□□□□□ -0.43
VPS16-206ENST00000466415 DOCK6Q96HP0 2047 aa12.36□□□□□ -0.43
VPS16-206ENST00000466415 DENND4AQ7Z401 1863 aa12.36□□□□□ -0.43
VPS16-206ENST00000466415 PSMD3O43242 534 aa12.35□□□□□ -0.43
VPS16-206ENST00000466415 HOXC11O43248 304 aaPredicted RBP12.35□□□□□ -0.43
VPS16-206ENST00000466415 SNAP91O60641 907 aa12.35□□□□□ -0.43
VPS16-206ENST00000466415 ECI2O75521 394 aa12.35□□□□□ -0.43
VPS16-206ENST00000466415 ANXA9O76027 345 aa12.35□□□□□ -0.43
VPS16-206ENST00000466415 TMEM63AO94886 807 aa12.35□□□□□ -0.43
VPS16-206ENST00000466415 FAM153BP0C7A2 387 aa12.35□□□□□ -0.43
VPS16-206ENST00000466415 PABPC1P11940 636 aaKnown RBP12.35□□□□□ -0.43
VPS16-206ENST00000466415 PSMC3P17980 439 aa12.35□□□□□ -0.43
VPS16-206ENST00000466415 GLDCP23378 1020 aa12.35□□□□□ -0.43
VPS16-206ENST00000466415 CD70P32970 193 aa12.35□□□□□ -0.43
VPS16-206ENST00000466415 GEMP55040 296 aa12.35□□□□□ -0.43
VPS16-206ENST00000466415 DHX9Q08211 1270 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms