RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 LIASO43766 372 aa17.3■□□□□ 0.36
EXOSC3-203ENST00000465229 RAMP2O60895 175 aa17.3■□□□□ 0.36
EXOSC3-203ENST00000465229 KRT14P02533 472 aa17.3■□□□□ 0.36
EXOSC3-203ENST00000465229 RHOCP08134 193 aa17.3■□□□□ 0.36
EXOSC3-203ENST00000465229 CISD3P0C7P0 127 aa17.3■□□□□ 0.36
EXOSC3-203ENST00000465229 HLA-FP30511 346 aa17.3■□□□□ 0.36
EXOSC3-203ENST00000465229 SLC6A11P48066 632 aa17.3■□□□□ 0.36
EXOSC3-203ENST00000465229 NR2C2P49116 596 aa17.3■□□□□ 0.36
EXOSC3-203ENST00000465229 PMS2P54278 862 aa17.3■□□□□ 0.36
EXOSC3-203ENST00000465229 GNA12Q03113 381 aa17.3■□□□□ 0.36
EXOSC3-203ENST00000465229 POLD3Q15054 466 aaPredicted RBP17.3■□□□□ 0.36
EXOSC3-203ENST00000465229 TUBB8Q3ZCM7 444 aa17.3■□□□□ 0.36
EXOSC3-203ENST00000465229 TTMPQ5BVD1 217 aa17.3■□□□□ 0.36
EXOSC3-203ENST00000465229 CCDC117Q8IWD4 279 aaPredicted RBP17.3■□□□□ 0.36
EXOSC3-203ENST00000465229 CCDC33Q8N5R6 958 aa17.3■□□□□ 0.36
EXOSC3-203ENST00000465229 TTC13Q8NBP0 860 aa17.3■□□□□ 0.36
EXOSC3-203ENST00000465229 ACTL9Q8TC94 416 aa17.3■□□□□ 0.36
EXOSC3-203ENST00000465229 CSGALNACT1Q8TDX6 532 aa17.3■□□□□ 0.36
EXOSC3-203ENST00000465229 UBLCP1Q8WVY7 318 aaPredicted RBP17.3■□□□□ 0.36
EXOSC3-203ENST00000465229 P3H4Q92791 437 aa17.3■□□□□ 0.36
EXOSC3-203ENST00000465229 NKD2Q969F2 451 aaPredicted RBP17.3■□□□□ 0.36
EXOSC3-203ENST00000465229 ARL8AQ96BM9 186 aa17.3■□□□□ 0.36
EXOSC3-203ENST00000465229 XPO6Q96QU8 1125 aaKnown RBP17.3■□□□□ 0.36
EXOSC3-203ENST00000465229 TMBIM4Q9HC24 238 aa17.3■□□□□ 0.36
EXOSC3-203ENST00000465229 ASIC3Q9UHC3 531 aa17.3■□□□□ 0.36
EXOSC3-203ENST00000465229 RASA4BC9J798 803 aa17.29■□□□□ 0.36
EXOSC3-203ENST00000465229 NDC80O14777 642 aa17.29■□□□□ 0.36
EXOSC3-203ENST00000465229 RASA4O43374 803 aa17.29■□□□□ 0.36
EXOSC3-203ENST00000465229 TULP3O75386 442 aa17.29■□□□□ 0.36
EXOSC3-203ENST00000465229 MZF1P28698 734 aaPredicted RBP17.29■□□□□ 0.36
EXOSC3-203ENST00000465229 CD70P32970 193 aa17.29■□□□□ 0.36
EXOSC3-203ENST00000465229 YBEYP58557 167 aaPredicted RBP17.29■□□□□ 0.36
EXOSC3-203ENST00000465229 OTUD4Q01804 1114 aaKnown RBP17.29■□□□□ 0.36
EXOSC3-203ENST00000465229 LMAN2Q12907 356 aa17.29■□□□□ 0.36
EXOSC3-203ENST00000465229 BYSLQ13895 437 aaKnown RBP17.29■□□□□ 0.36
EXOSC3-203ENST00000465229 RNF219Q5W0B1 726 aaPredicted RBP17.29■□□□□ 0.36
EXOSC3-203ENST00000465229 ZNF783Q6ZMS7 281 aa17.29■□□□□ 0.36
EXOSC3-203ENST00000465229 CROCCP2Q86T23 111 aa17.29■□□□□ 0.36
EXOSC3-203ENST00000465229 ALG14Q96F25 216 aa17.29■□□□□ 0.36
EXOSC3-203ENST00000465229 HMCESQ96FZ2 354 aa17.29■□□□□ 0.36
EXOSC3-203ENST00000465229 ATP6V1G3Q96LB4 118 aa17.29■□□□□ 0.36
EXOSC3-203ENST00000465229 FAM118BQ9BPY3 351 aa17.29■□□□□ 0.36
EXOSC3-203ENST00000465229 FEM1AQ9BSK4 669 aa17.29■□□□□ 0.36
EXOSC3-203ENST00000465229 MAGEH1Q9H213 219 aa17.29■□□□□ 0.36
EXOSC3-203ENST00000465229 ABCB8Q9NUT2 735 aa17.29■□□□□ 0.36
EXOSC3-203ENST00000465229 DNAJC17Q9NVM6 304 aaKnown RBP17.29■□□□□ 0.36
EXOSC3-203ENST00000465229 KIAA1522Q9P206 1035 aaPredicted RBP17.29■□□□□ 0.36
EXOSC3-203ENST00000465229 ATP8A1Q9Y2Q0 1164 aa17.29■□□□□ 0.36
EXOSC3-203ENST00000465229 OR51B4Q9Y5P0 310 aa17.29■□□□□ 0.36
EXOSC3-203ENST00000465229 TP73O15350 636 aa17.29■□□□□ 0.36
EXOSC3-203ENST00000465229 ITGAVP06756 1048 aa17.29■□□□□ 0.36
EXOSC3-203ENST00000465229 MYZAPP0CAP1 466 aa17.29■□□□□ 0.36
EXOSC3-203ENST00000465229 SRFP11831 508 aa17.29■□□□□ 0.36
EXOSC3-203ENST00000465229 ACVRL1P37023 503 aa17.29■□□□□ 0.36
EXOSC3-203ENST00000465229 OPRD1P41143 372 aa17.29■□□□□ 0.36
EXOSC3-203ENST00000465229 SOX9P48436 509 aa17.29■□□□□ 0.36
EXOSC3-203ENST00000465229 NUMBP49757 651 aa17.29■□□□□ 0.36
EXOSC3-203ENST00000465229 PAPOLAP51003 745 aaKnown RBP17.29■□□□□ 0.36
EXOSC3-203ENST00000465229 ZNF844Q08AG5 666 aa17.29■□□□□ 0.36
EXOSC3-203ENST00000465229 MESP2Q0VG99 397 aa17.29■□□□□ 0.36
EXOSC3-203ENST00000465229 NOMO1Q15155 1222 aa17.29■□□□□ 0.36
EXOSC3-203ENST00000465229 PARP15Q460N3 678 aa17.29■□□□□ 0.36
EXOSC3-203ENST00000465229 CEP85LQ5SZL2 805 aa17.29■□□□□ 0.36
EXOSC3-203ENST00000465229 NAIF1Q69YI7 327 aaPredicted RBP17.29■□□□□ 0.36
EXOSC3-203ENST00000465229 ZNF557Q8N988 423 aaPredicted RBP17.29■□□□□ 0.36
EXOSC3-203ENST00000465229 OR7D4Q8NG98 312 aa17.29■□□□□ 0.36
EXOSC3-203ENST00000465229 DNASE1L2Q92874 299 aa17.29■□□□□ 0.36
EXOSC3-203ENST00000465229 ARHGEF2Q92974 986 aaKnown RBP17.29■□□□□ 0.36
EXOSC3-203ENST00000465229 CCDC114Q96M63 670 aa17.29■□□□□ 0.36
EXOSC3-203ENST00000465229 OLFM3Q96PB7 478 aa17.29■□□□□ 0.36
EXOSC3-203ENST00000465229 FOXP3Q9BZS1 431 aa17.29■□□□□ 0.36
EXOSC3-203ENST00000465229 MUC3BQ9H195 1237 aa17.29■□□□□ 0.36
EXOSC3-203ENST00000465229 SLC2A4RGQ9NR83 387 aa17.29■□□□□ 0.36
EXOSC3-203ENST00000465229 RAD54BQ9Y620 910 aa17.29■□□□□ 0.36
EXOSC3-203ENST00000465229 NCOR1O75376 2440 aa17.29■□□□□ 0.36
EXOSC3-203ENST00000465229 DFFAO00273 331 aa17.28■□□□□ 0.36
EXOSC3-203ENST00000465229 CSKP41240 450 aa17.28■□□□□ 0.36
EXOSC3-203ENST00000465229 DGKGP49619 791 aa17.28■□□□□ 0.36
EXOSC3-203ENST00000465229 OXCT1P55809 520 aa17.28■□□□□ 0.36
EXOSC3-203ENST00000465229 SKOR1P84550 965 aa17.28■□□□□ 0.36
EXOSC3-203ENST00000465229 GALNT2Q10471 571 aa17.28■□□□□ 0.36
EXOSC3-203ENST00000465229 OASLQ15646 514 aaKnown RBP17.28■□□□□ 0.36
EXOSC3-203ENST00000465229 IER5LQ5T953 404 aa17.28■□□□□ 0.36
EXOSC3-203ENST00000465229 AGBL2Q5U5Z8 902 aa17.28■□□□□ 0.36
EXOSC3-203ENST00000465229 CEP128Q6ZU80 1094 aa17.28■□□□□ 0.36
EXOSC3-203ENST00000465229 TRMT10CQ7L0Y3 403 aaKnown RBP17.28■□□□□ 0.36
EXOSC3-203ENST00000465229 BZW1Q7L1Q6 419 aaKnown RBP17.28■□□□□ 0.36
EXOSC3-203ENST00000465229 KIAA0907Q7Z7F0 614 aaPredicted RBP17.28■□□□□ 0.36
EXOSC3-203ENST00000465229 APCDD1Q8J025 514 aa17.28■□□□□ 0.36
EXOSC3-203ENST00000465229 LRRN4Q8WUT4 740 aa17.28■□□□□ 0.36
EXOSC3-203ENST00000465229 SPON2Q9BUD6 331 aa17.28■□□□□ 0.36
EXOSC3-203ENST00000465229 EPB41L4BQ9H329 900 aa17.28■□□□□ 0.36
EXOSC3-203ENST00000465229 HEBP1Q9NRV9 189 aa17.28■□□□□ 0.36
EXOSC3-203ENST00000465229 DEC1Q9P2X7 70 aa17.28■□□□□ 0.36
EXOSC3-203ENST00000465229 INTS6Q9UL03 887 aaKnown RBP17.28■□□□□ 0.36
EXOSC3-203ENST00000465229 SLC27A6Q9Y2P4 619 aa17.28■□□□□ 0.36
EXOSC3-203ENST00000465229 TCF20Q9UGU0 1960 aaKnown RBP17.27■□□□□ 0.36
EXOSC3-203ENST00000465229 ARHGAP42A6NI28 874 aa17.27■□□□□ 0.36
EXOSC3-203ENST00000465229 MX2P20592 715 aa17.27■□□□□ 0.36
EXOSC3-203ENST00000465229 PLK1P53350 603 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms