RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 CTNNA2P26232 953 aa19.34■□□□□ 0.69
LMNB1-204ENST00000463908 FNTBP49356 437 aa19.34■□□□□ 0.69
LMNB1-204ENST00000463908 COPAP53621 1224 aa19.34■□□□□ 0.69
LMNB1-204ENST00000463908 SLC20A2Q08357 652 aa19.34■□□□□ 0.69
LMNB1-204ENST00000463908 PAFAH1B3Q15102 231 aaKnown RBP19.34■□□□□ 0.69
LMNB1-204ENST00000463908 DLG2Q15700 870 aa19.34■□□□□ 0.69
LMNB1-204ENST00000463908 NCBP2-AS2Q69YL0 99 aa19.34■□□□□ 0.69
LMNB1-204ENST00000463908 RETSATQ6NUM9 610 aa19.34■□□□□ 0.69
LMNB1-204ENST00000463908 TMCO3Q6UWJ1 677 aa19.34■□□□□ 0.69
LMNB1-204ENST00000463908 ARHGAP36Q6ZRI8 547 aa19.34■□□□□ 0.69
LMNB1-204ENST00000463908 VSIG1Q86XK7 387 aa19.34■□□□□ 0.69
LMNB1-204ENST00000463908 REXO1L1PQ8IX06 675 aa19.34■□□□□ 0.69
LMNB1-204ENST00000463908 RCOR2Q8IZ40 523 aa19.34■□□□□ 0.69
LMNB1-204ENST00000463908 MDGA1Q8NFP4 955 aa19.34■□□□□ 0.69
LMNB1-204ENST00000463908 PRRX2Q99811 253 aa19.34■□□□□ 0.69
LMNB1-204ENST00000463908 MKRN2Q9H000 416 aaKnown RBP19.34■□□□□ 0.69
LMNB1-204ENST00000463908 SLC6A17Q9H1V8 727 aa19.34■□□□□ 0.69
LMNB1-204ENST00000463908 AMFRQ9UKV5 643 aa19.34■□□□□ 0.69
LMNB1-204ENST00000463908 CHD5Q8TDI0 1954 aa19.33■□□□□ 0.69
LMNB1-204ENST00000463908 CXorf51AA0A1B0GTR3 108 aa19.33■□□□□ 0.68
LMNB1-204ENST00000463908 TARSL2A2RTX5 802 aaKnown RBP19.33■□□□□ 0.68
LMNB1-204ENST00000463908 SYNCRIPO60506 623 aaKnown RBP19.33■□□□□ 0.68
LMNB1-204ENST00000463908 SIN3BO75182 1162 aa19.33■□□□□ 0.68
LMNB1-204ENST00000463908 ZRANB2O95218 330 aaKnown RBP eCLIP19.33■□□□□ 0.68
LMNB1-204ENST00000463908 FTCDO95954 541 aa19.33■□□□□ 0.68
LMNB1-204ENST00000463908 C7P10643 843 aa19.33■□□□□ 0.68
LMNB1-204ENST00000463908 NNMTP40261 264 aa19.33■□□□□ 0.68
LMNB1-204ENST00000463908 CDKN2BP42772 138 aa19.33■□□□□ 0.68
LMNB1-204ENST00000463908 SLC10A2Q12908 348 aaPredicted RBP19.33■□□□□ 0.68
LMNB1-204ENST00000463908 ACCSLQ4AC99 568 aa19.33■□□□□ 0.68
LMNB1-204ENST00000463908 HEATR6Q6AI08 1181 aaKnown RBP19.33■□□□□ 0.68
LMNB1-204ENST00000463908 ANO7Q6IWH7 933 aa19.33■□□□□ 0.68
LMNB1-204ENST00000463908 PEX26Q7Z412 305 aa19.33■□□□□ 0.68
LMNB1-204ENST00000463908 SYCE1Q8N0S2 351 aa19.33■□□□□ 0.68
LMNB1-204ENST00000463908 ATP11CQ8NB49 1132 aa19.33■□□□□ 0.68
LMNB1-204ENST00000463908 ALG3Q92685 438 aa19.33■□□□□ 0.68
LMNB1-204ENST00000463908 FAM129BQ96TA1 746 aa19.33■□□□□ 0.68
LMNB1-204ENST00000463908 PDFQ9HBH1 243 aa19.33■□□□□ 0.68
LMNB1-204ENST00000463908 HPCAL4Q9UM19 191 aa19.33■□□□□ 0.68
LMNB1-204ENST00000463908 PACSIN2Q9UNF0 486 aaPredicted RBP19.33■□□□□ 0.68
LMNB1-204ENST00000463908 ARHGAP42A6NI28 874 aa19.32■□□□□ 0.68
LMNB1-204ENST00000463908 DFFAO00273 331 aa19.32■□□□□ 0.68
LMNB1-204ENST00000463908 KRT10P13645 584 aa19.32■□□□□ 0.68
LMNB1-204ENST00000463908 NDUFV2P19404 249 aa19.32■□□□□ 0.68
LMNB1-204ENST00000463908 SERPINH1P50454 418 aaKnown RBP19.32■□□□□ 0.68
LMNB1-204ENST00000463908 PTPN5P54829 565 aa19.32■□□□□ 0.68
LMNB1-204ENST00000463908 ADCY2Q08462 1091 aa19.32■□□□□ 0.68
LMNB1-204ENST00000463908 STARD3Q14849 445 aa19.32■□□□□ 0.68
LMNB1-204ENST00000463908 LLGL1Q15334 1064 aa19.32■□□□□ 0.68
LMNB1-204ENST00000463908 SLC9A4Q6AI14 798 aa19.32■□□□□ 0.68
LMNB1-204ENST00000463908 SPOCD1Q6ZMY3 1216 aa19.32■□□□□ 0.68
LMNB1-204ENST00000463908 ZNF354CQ86Y25 554 aa19.32■□□□□ 0.68
LMNB1-204ENST00000463908 PLD5Q8N7P1 536 aa19.32■□□□□ 0.68
LMNB1-204ENST00000463908 ZBTB44Q8NCP5 570 aa19.32■□□□□ 0.68
LMNB1-204ENST00000463908 EXD1Q8NHP7 514 aa19.32■□□□□ 0.68
LMNB1-204ENST00000463908 HMGB4Q8WW32 186 aa19.32■□□□□ 0.68
LMNB1-204ENST00000463908 MRGPRX1Q96LB2 322 aa19.32■□□□□ 0.68
LMNB1-204ENST00000463908 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.32■□□□□ 0.68
LMNB1-204ENST00000463908 CCDC163A0A0D9SF12 145 aa19.31■□□□□ 0.68
LMNB1-204ENST00000463908 EDDM13A0A1B0GTR0 161 aa19.31■□□□□ 0.68
LMNB1-204ENST00000463908 CCDC66A2RUB6 948 aa19.31■□□□□ 0.68
LMNB1-204ENST00000463908 DDX3YO15523 660 aaKnown RBP19.31■□□□□ 0.68
LMNB1-204ENST00000463908 PRAMEF11O60813 436 aa19.31■□□□□ 0.68
LMNB1-204ENST00000463908 CLCN6P51797 869 aa19.31■□□□□ 0.68
LMNB1-204ENST00000463908 GBE1Q04446 702 aa19.31■□□□□ 0.68
LMNB1-204ENST00000463908 CYTH1Q15438 398 aa19.31■□□□□ 0.68
LMNB1-204ENST00000463908 WDR5BQ86VZ2 330 aa19.31■□□□□ 0.68
LMNB1-204ENST00000463908 LONP2Q86WA8 852 aa19.31■□□□□ 0.68
LMNB1-204ENST00000463908 TMPRSS6Q8IU80 811 aa19.31■□□□□ 0.68
LMNB1-204ENST00000463908 STK40Q8N2I9 435 aa19.31■□□□□ 0.68
LMNB1-204ENST00000463908 OR2T3Q8NH03 318 aa19.31■□□□□ 0.68
LMNB1-204ENST00000463908 HES6Q96HZ4 224 aa19.31■□□□□ 0.68
LMNB1-204ENST00000463908 FAM126AQ9BYI3 521 aaPredicted RBP19.31■□□□□ 0.68
LMNB1-204ENST00000463908 ZSCAN32Q9NX65 697 aa19.31■□□□□ 0.68
LMNB1-204ENST00000463908 IPO11Q9UI26 975 aaKnown RBP19.31■□□□□ 0.68
LMNB1-204ENST00000463908 PYCARDQ9ULZ3 195 aa19.31■□□□□ 0.68
LMNB1-204ENST00000463908 FCF1Q9Y324 198 aaKnown RBP19.31■□□□□ 0.68
LMNB1-204ENST00000463908 VPS13AQ96RL7 3174 aa19.31■□□□□ 0.68
LMNB1-204ENST00000463908 SPTBN4Q9H254 2564 aa19.31■□□□□ 0.68
LMNB1-204ENST00000463908 AXIN1O15169 862 aa19.3■□□□□ 0.68
LMNB1-204ENST00000463908 MFSD11O43934 449 aa19.3■□□□□ 0.68
LMNB1-204ENST00000463908 ALDH1A2O94788 518 aa19.3■□□□□ 0.68
LMNB1-204ENST00000463908 PEX11BO96011 259 aa19.3■□□□□ 0.68
LMNB1-204ENST00000463908 PYGMP11217 842 aa19.3■□□□□ 0.68
LMNB1-204ENST00000463908 NRLP54845 237 aa19.3■□□□□ 0.68
LMNB1-204ENST00000463908 RWDD2BP57060 319 aa19.3■□□□□ 0.68
LMNB1-204ENST00000463908 INO80DQ53TQ3 878 aaPredicted RBP19.3■□□□□ 0.68
LMNB1-204ENST00000463908 AADACL2Q6P093 401 aa19.3■□□□□ 0.68
LMNB1-204ENST00000463908 Q6ZVU0 165 aa19.3■□□□□ 0.68
LMNB1-204ENST00000463908 OR2A12Q8NGT7 310 aa19.3■□□□□ 0.68
LMNB1-204ENST00000463908 HERPUD2Q9BSE4 406 aa19.3■□□□□ 0.68
LMNB1-204ENST00000463908 MAK16Q9BXY0 300 aaKnown RBP19.3■□□□□ 0.68
LMNB1-204ENST00000463908 TPSD1Q9BZJ3 242 aa19.3■□□□□ 0.68
LMNB1-204ENST00000463908 RSPH9Q9H1X1 276 aaPredicted RBP19.3■□□□□ 0.68
LMNB1-204ENST00000463908 TNKS2Q9H2K2 1166 aa19.3■□□□□ 0.68
LMNB1-204ENST00000463908 NUP205Q92621 2012 aa19.3■□□□□ 0.68
LMNB1-204ENST00000463908 hCG_1818297A0A087WSY0 165 aa19.29■□□□□ 0.68
LMNB1-204ENST00000463908 ZSCAN5CA6NGD5 496 aaPredicted RBP19.29■□□□□ 0.68
LMNB1-204ENST00000463908 HRO43593 1189 aa19.29■□□□□ 0.68
LMNB1-204ENST00000463908 MAFKO60675 156 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms