RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 PANX2Q96RD6 677 aa13.36□□□□□ -0.27
R3HDM1-213ENST00000463230 PEBP4Q96S96 227 aa13.36□□□□□ -0.27
R3HDM1-213ENST00000463230 SPON2Q9BUD6 331 aa13.36□□□□□ -0.27
R3HDM1-213ENST00000463230 DHX35Q9H5Z1 703 aaKnown RBP13.36□□□□□ -0.27
R3HDM1-213ENST00000463230 EP300Q09472 2414 aaPredicted RBP13.36□□□□□ -0.27
R3HDM1-213ENST00000463230 PTPRZ1P23471 2315 aaPredicted RBP13.36□□□□□ -0.27
R3HDM1-213ENST00000463230 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.35□□□□□ -0.27
R3HDM1-213ENST00000463230 CBX4O00257 560 aa13.35□□□□□ -0.27
R3HDM1-213ENST00000463230 EEF2KO00418 725 aaKnown RBP13.35□□□□□ -0.27
R3HDM1-213ENST00000463230 KDELR3O43731 214 aa13.35□□□□□ -0.27
R3HDM1-213ENST00000463230 CREB3O43889 395 aa13.35□□□□□ -0.27
R3HDM1-213ENST00000463230 MTA2O94776 668 aa13.35□□□□□ -0.27
R3HDM1-213ENST00000463230 LIMK1P53667 647 aa13.35□□□□□ -0.27
R3HDM1-213ENST00000463230 ZNF33AQ06730 810 aa13.35□□□□□ -0.27
R3HDM1-213ENST00000463230 CCDC15Q0P6D6 951 aa13.35□□□□□ -0.27
R3HDM1-213ENST00000463230 TCEAL1Q15170 157 aa13.35□□□□□ -0.27
R3HDM1-213ENST00000463230 DPYSL2Q16555 572 aa13.35□□□□□ -0.27
R3HDM1-213ENST00000463230 IL31Q6EBC2 164 aa13.35□□□□□ -0.27
R3HDM1-213ENST00000463230 C22orf39Q6P5X5 142 aa13.35□□□□□ -0.27
R3HDM1-213ENST00000463230 TMEFF1Q8IYR6 380 aa13.35□□□□□ -0.27
R3HDM1-213ENST00000463230 KIAA2013Q8IYS2 634 aa13.35□□□□□ -0.27
R3HDM1-213ENST00000463230 STK40Q8N2I9 435 aa13.35□□□□□ -0.27
R3HDM1-213ENST00000463230 TC2NQ8N9U0 490 aa13.35□□□□□ -0.27
R3HDM1-213ENST00000463230 FAM131CQ96AQ9 280 aa13.35□□□□□ -0.27
R3HDM1-213ENST00000463230 BTBD1Q9H0C5 482 aa13.35□□□□□ -0.27
R3HDM1-213ENST00000463230 CTTNBP2NLQ9P2B4 639 aa13.35□□□□□ -0.27
R3HDM1-213ENST00000463230 RCOR3Q9P2K3 495 aaPredicted RBP13.35□□□□□ -0.27
R3HDM1-213ENST00000463230 PILRBQ9UKJ0 227 aa13.35□□□□□ -0.27
R3HDM1-213ENST00000463230 H3BRJ5 948 aa13.35□□□□□ -0.27
R3HDM1-213ENST00000463230 GOT1P17174 413 aa13.35□□□□□ -0.27
R3HDM1-213ENST00000463230 RECQLP46063 649 aaPredicted RBP13.35□□□□□ -0.27
R3HDM1-213ENST00000463230 HADHQ16836 314 aaKnown RBP13.35□□□□□ -0.27
R3HDM1-213ENST00000463230 ACCSLQ4AC99 568 aa13.35□□□□□ -0.27
R3HDM1-213ENST00000463230 RFX8Q6ZV50 586 aa13.35□□□□□ -0.27
R3HDM1-213ENST00000463230 RHOT2Q8IXI1 618 aa13.35□□□□□ -0.27
R3HDM1-213ENST00000463230 CCDC170Q8IYT3 715 aa13.35□□□□□ -0.27
R3HDM1-213ENST00000463230 LZTR1Q8N653 840 aa13.35□□□□□ -0.27
R3HDM1-213ENST00000463230 FRMD1Q8N878 549 aa13.35□□□□□ -0.27
R3HDM1-213ENST00000463230 C12orf50Q8NA57 414 aaPredicted RBP13.35□□□□□ -0.27
R3HDM1-213ENST00000463230 TMIEQ8NEW7 156 aa13.35□□□□□ -0.27
R3HDM1-213ENST00000463230 NETO1Q8TDF5 533 aa13.35□□□□□ -0.27
R3HDM1-213ENST00000463230 DNASE2BQ8WZ79 361 aa13.35□□□□□ -0.27
R3HDM1-213ENST00000463230 KCTD15Q96SI1 283 aaPredicted RBP13.35□□□□□ -0.27
R3HDM1-213ENST00000463230 CHP1Q99653 195 aa13.35□□□□□ -0.27
R3HDM1-213ENST00000463230 KDM4CQ9H3R0 1056 aa13.35□□□□□ -0.27
R3HDM1-213ENST00000463230 ZWILCHQ9H900 591 aa13.35□□□□□ -0.27
R3HDM1-213ENST00000463230 PCSK1NQ9UHG2 260 aa13.35□□□□□ -0.27
R3HDM1-213ENST00000463230 DNAI1Q9UI46 699 aa13.35□□□□□ -0.27
R3HDM1-213ENST00000463230 METTL12A8MUP2 240 aa13.34□□□□□ -0.27
R3HDM1-213ENST00000463230 PROSCO94903 275 aa13.34□□□□□ -0.27
R3HDM1-213ENST00000463230 PRNPP04156 253 aa13.34□□□□□ -0.27
R3HDM1-213ENST00000463230 SLC8A1P32418 973 aa13.34□□□□□ -0.27
R3HDM1-213ENST00000463230 ARHGAP25P42331 645 aa13.34□□□□□ -0.27
R3HDM1-213ENST00000463230 ARF5P84085 180 aa13.34□□□□□ -0.27
R3HDM1-213ENST00000463230 DUOXA1Q1HG43 343 aa13.34□□□□□ -0.27
R3HDM1-213ENST00000463230 GAS2L3Q86XJ1 694 aa13.34□□□□□ -0.27
R3HDM1-213ENST00000463230 MMAAQ8IVH4 418 aaKnown RBP13.34□□□□□ -0.27
R3HDM1-213ENST00000463230 ERLEC1Q96DZ1 483 aa13.34□□□□□ -0.27
R3HDM1-213ENST00000463230 MTG2Q9H4K7 406 aa13.34□□□□□ -0.27
R3HDM1-213ENST00000463230 LUC7LQ9NQ29 371 aaKnown RBP13.34□□□□□ -0.27
R3HDM1-213ENST00000463230 FBXL12Q9NXK8 326 aa13.34□□□□□ -0.27
R3HDM1-213ENST00000463230 PPM1HQ9ULR3 514 aa13.34□□□□□ -0.27
R3HDM1-213ENST00000463230 ZNF292O60281 2723 aa13.34□□□□□ -0.27
R3HDM1-213ENST00000463230 KHNYNO15037 678 aaKnown RBP13.33□□□□□ -0.27
R3HDM1-213ENST00000463230 SEMA4FO95754 770 aa13.33□□□□□ -0.27
R3HDM1-213ENST00000463230 GSRP00390 522 aa13.33□□□□□ -0.27
R3HDM1-213ENST00000463230 FECHP22830 423 aa13.33□□□□□ -0.27
R3HDM1-213ENST00000463230 CDC25BP30305 580 aa13.33□□□□□ -0.27
R3HDM1-213ENST00000463230 ARL4AP40617 200 aa13.33□□□□□ -0.27
R3HDM1-213ENST00000463230 PTGER3P43115 390 aa13.33□□□□□ -0.27
R3HDM1-213ENST00000463230 PSMD8P48556 350 aa13.33□□□□□ -0.27
R3HDM1-213ENST00000463230 INO80DQ53TQ3 878 aaPredicted RBP13.33□□□□□ -0.27
R3HDM1-213ENST00000463230 SLC23A3Q6PIS1 610 aa13.33□□□□□ -0.27
R3HDM1-213ENST00000463230 Q6ZVU0 165 aa13.33□□□□□ -0.27
R3HDM1-213ENST00000463230 SLC41A1Q8IVJ1 513 aa13.33□□□□□ -0.27
R3HDM1-213ENST00000463230 FAM71BQ8TC56 605 aa13.33□□□□□ -0.27
R3HDM1-213ENST00000463230 PIGKQ92643 395 aa13.33□□□□□ -0.27
R3HDM1-213ENST00000463230 LRIG1Q96JA1 1093 aa13.33□□□□□ -0.27
R3HDM1-213ENST00000463230 HSPA12BQ96MM6 686 aa13.33□□□□□ -0.27
R3HDM1-213ENST00000463230 OMDQ99983 421 aa13.33□□□□□ -0.27
R3HDM1-213ENST00000463230 GPR174Q9BXC1 333 aa13.33□□□□□ -0.27
R3HDM1-213ENST00000463230 MAGEB5Q9BZ81 275 aa13.33□□□□□ -0.27
R3HDM1-213ENST00000463230 NOL6Q9H6R4 1146 aaKnown RBP13.33□□□□□ -0.27
R3HDM1-213ENST00000463230 OSGEPQ9NPF4 335 aa13.33□□□□□ -0.27
R3HDM1-213ENST00000463230 NDFIP2Q9NV92 336 aa13.33□□□□□ -0.27
R3HDM1-213ENST00000463230 GPATCH2LQ9NWQ4 482 aa13.33□□□□□ -0.27
R3HDM1-213ENST00000463230 ARHGAP42A6NI28 874 aa13.33□□□□□ -0.28
R3HDM1-213ENST00000463230 LRRC72A6NJI9 287 aa13.33□□□□□ -0.28
R3HDM1-213ENST00000463230 MEI4A8MW99 385 aa13.33□□□□□ -0.28
R3HDM1-213ENST00000463230 RASA4BC9J798 803 aa13.33□□□□□ -0.28
R3HDM1-213ENST00000463230 MID1O15344 667 aa13.33□□□□□ -0.28
R3HDM1-213ENST00000463230 DAPK3O43293 454 aa13.33□□□□□ -0.28
R3HDM1-213ENST00000463230 RASA4O43374 803 aa13.33□□□□□ -0.28
R3HDM1-213ENST00000463230 LCA5LO95447 670 aa13.33□□□□□ -0.28
R3HDM1-213ENST00000463230 MT-CO1P00395 513 aa13.33□□□□□ -0.28
R3HDM1-213ENST00000463230 GNSP15586 552 aa13.33□□□□□ -0.28
R3HDM1-213ENST00000463230 NUDT1P36639 197 aa13.33□□□□□ -0.28
R3HDM1-213ENST00000463230 ACVRL1P37023 503 aa13.33□□□□□ -0.28
R3HDM1-213ENST00000463230 SLC25A11Q02978 314 aaKnown RBP13.33□□□□□ -0.28
R3HDM1-213ENST00000463230 SERINC3Q13530 473 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms