RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 TRIM65Q6PJ69 517 aa7.8□□□□□ -1.16
UBE4B-204ENST00000462658 WDR59Q6PJI9 974 aa7.8□□□□□ -1.16
UBE4B-204ENST00000462658 APBB1IPQ7Z5R6 666 aaPredicted RBP7.8□□□□□ -1.16
UBE4B-204ENST00000462658 UBE2Q1Q7Z7E8 422 aa7.8□□□□□ -1.16
UBE4B-204ENST00000462658 RPAINQ86UA6 219 aa7.8□□□□□ -1.16
UBE4B-204ENST00000462658 C17orf53Q8N3J3 647 aaPredicted RBP7.8□□□□□ -1.16
UBE4B-204ENST00000462658 FBXL13Q8NEE6 735 aa7.8□□□□□ -1.16
UBE4B-204ENST00000462658 STON2Q8WXE9 905 aa7.8□□□□□ -1.16
UBE4B-204ENST00000462658 SYN2Q92777 582 aaPredicted RBP7.8□□□□□ -1.16
UBE4B-204ENST00000462658 CHP1Q99653 195 aa7.8□□□□□ -1.16
UBE4B-204ENST00000462658 DEF6Q9H4E7 631 aa7.8□□□□□ -1.16
UBE4B-204ENST00000462658 RPF1Q9H9Y2 349 aaKnown RBP7.8□□□□□ -1.16
UBE4B-204ENST00000462658 BCO1Q9HAY6 547 aa7.8□□□□□ -1.16
UBE4B-204ENST00000462658 RAB20Q9NX57 234 aa7.8□□□□□ -1.16
UBE4B-204ENST00000462658 SMPD4Q9NXE4 827 aa7.8□□□□□ -1.16
UBE4B-204ENST00000462658 COQ4Q9Y3A0 265 aa7.8□□□□□ -1.16
UBE4B-204ENST00000462658 DAAM1Q9Y4D1 1078 aa7.8□□□□□ -1.16
UBE4B-204ENST00000462658 IPPQ9Y573 584 aa7.8□□□□□ -1.16
UBE4B-204ENST00000462658 PCDHA13Q9Y5I0 950 aa7.8□□□□□ -1.16
UBE4B-204ENST00000462658 TRPV2Q9Y5S1 764 aa7.8□□□□□ -1.16
UBE4B-204ENST00000462658 SIP14410 1827 aa7.8□□□□□ -1.16
UBE4B-204ENST00000462658 KAT6AQ92794 2004 aa7.79□□□□□ -1.16
UBE4B-204ENST00000462658 SZT2Q5T011 3432 aa7.79□□□□□ -1.16
UBE4B-204ENST00000462658 A0A0U1RQG5 324 aaPredicted RBP7.79□□□□□ -1.16
UBE4B-204ENST00000462658 IL18RAPO95256 599 aa7.79□□□□□ -1.16
UBE4B-204ENST00000462658 PF4V1P10720 104 aa7.79□□□□□ -1.16
UBE4B-204ENST00000462658 CCL5P13501 91 aa7.79□□□□□ -1.16
UBE4B-204ENST00000462658 ZSCAN20P17040 1043 aaPredicted RBP7.79□□□□□ -1.16
UBE4B-204ENST00000462658 ACO1P21399 889 aaKnown RBP7.79□□□□□ -1.16
UBE4B-204ENST00000462658 WASP42768 502 aa7.79□□□□□ -1.16
UBE4B-204ENST00000462658 AP3M2P53677 418 aa7.79□□□□□ -1.16
UBE4B-204ENST00000462658 POU5F1Q01860 360 aaKnown RBP7.79□□□□□ -1.16
UBE4B-204ENST00000462658 BIRC3Q13489 604 aa7.79□□□□□ -1.16
UBE4B-204ENST00000462658 RAPGEF1Q13905 1077 aa7.79□□□□□ -1.16
UBE4B-204ENST00000462658 MTF1Q14872 753 aa7.79□□□□□ -1.16
UBE4B-204ENST00000462658 ELAVL1Q15717 326 aaKnown RBP7.79□□□□□ -1.16
UBE4B-204ENST00000462658 DCAF4L1Q3SXM0 396 aa7.79□□□□□ -1.16
UBE4B-204ENST00000462658 ZACNQ401N2 412 aa7.79□□□□□ -1.16
UBE4B-204ENST00000462658 NOTUMQ6P988 496 aa7.79□□□□□ -1.16
UBE4B-204ENST00000462658 SLC27A1Q6PCB7 646 aa7.79□□□□□ -1.16
UBE4B-204ENST00000462658 RAD9BQ6WBX8 426 aa7.79□□□□□ -1.16
UBE4B-204ENST00000462658 C15orf39Q6ZRI6 1047 aa7.79□□□□□ -1.16
UBE4B-204ENST00000462658 XYLT1Q86Y38 959 aa7.79□□□□□ -1.16
UBE4B-204ENST00000462658 WDR49Q8IV35 697 aa7.79□□□□□ -1.16
UBE4B-204ENST00000462658 RHOT1Q8IXI2 618 aa7.79□□□□□ -1.16
UBE4B-204ENST00000462658 MIER2Q8N344 545 aa7.79□□□□□ -1.16
UBE4B-204ENST00000462658 OR5B17Q8NGF7 314 aa7.79□□□□□ -1.16
UBE4B-204ENST00000462658 CCHCR1Q8TD31 782 aa7.79□□□□□ -1.16
UBE4B-204ENST00000462658 TAS1R2Q8TE23 839 aa7.79□□□□□ -1.16
UBE4B-204ENST00000462658 SEMA4DQ92854 862 aa7.79□□□□□ -1.16
UBE4B-204ENST00000462658 HSPBAP1Q96EW2 488 aa7.79□□□□□ -1.16
UBE4B-204ENST00000462658 SPAG5Q96R06 1193 aa7.79□□□□□ -1.16
UBE4B-204ENST00000462658 STK33Q9BYT3 514 aa7.79□□□□□ -1.16
UBE4B-204ENST00000462658 RHOBTB2Q9BYZ6 727 aa7.79□□□□□ -1.16
UBE4B-204ENST00000462658 UBE2TQ9NPD8 197 aaPredicted RBP7.79□□□□□ -1.16
UBE4B-204ENST00000462658 STARD7Q9NQZ5 370 aa7.79□□□□□ -1.16
UBE4B-204ENST00000462658 TRMT13Q9NUP7 481 aaKnown RBP7.79□□□□□ -1.16
UBE4B-204ENST00000462658 AIPL1Q9NZN9 384 aa7.79□□□□□ -1.16
UBE4B-204ENST00000462658 KLHL42Q9P2K6 505 aa7.79□□□□□ -1.16
UBE4B-204ENST00000462658 HECAQ9UBI9 543 aaPredicted RBP7.79□□□□□ -1.16
UBE4B-204ENST00000462658 DNAJC12Q9UKB3 198 aa7.79□□□□□ -1.16
UBE4B-204ENST00000462658 MYO6Q9UM54 1294 aa7.79□□□□□ -1.16
UBE4B-204ENST00000462658 SCN10AQ9Y5Y9 1956 aa7.79□□□□□ -1.16
UBE4B-204ENST00000462658 PTPRJQ12913 1337 aa7.78□□□□□ -1.16
UBE4B-204ENST00000462658 KRTAP9-7A8MTY7 169 aa7.78□□□□□ -1.16
UBE4B-204ENST00000462658 FAM171A2A8MVW0 826 aa7.78□□□□□ -1.16
UBE4B-204ENST00000462658 LACTBL1A8MY62 500 aa7.78□□□□□ -1.16
UBE4B-204ENST00000462658 DNM1LO00429 736 aa7.78□□□□□ -1.16
UBE4B-204ENST00000462658 CCP110O43303 1012 aa7.78□□□□□ -1.16
UBE4B-204ENST00000462658 ZSCAN12O43309 604 aa7.78□□□□□ -1.16
UBE4B-204ENST00000462658 ZC3H11AO75152 810 aaKnown RBP eCLIP7.78□□□□□ -1.16
UBE4B-204ENST00000462658 RPS6KA5O75582 802 aa7.78□□□□□ -1.16
UBE4B-204ENST00000462658 ENDOD1O94919 500 aa7.78□□□□□ -1.16
UBE4B-204ENST00000462658 VNN1O95497 513 aa7.78□□□□□ -1.16
UBE4B-204ENST00000462658 GASTP01350 101 aa7.78□□□□□ -1.16
UBE4B-204ENST00000462658 HLA-DRAP01903 254 aa7.78□□□□□ -1.16
UBE4B-204ENST00000462658 TNNC2P02585 160 aa7.78□□□□□ -1.16
UBE4B-204ENST00000462658 CHRNA1P02708 482 aa7.78□□□□□ -1.16
UBE4B-204ENST00000462658 SERPING1P05155 500 aa7.78□□□□□ -1.16
UBE4B-204ENST00000462658 CXCL8P10145 99 aa7.78□□□□□ -1.16
UBE4B-204ENST00000462658 CYLC1P35663 651 aaPredicted RBP7.78□□□□□ -1.16
UBE4B-204ENST00000462658 THPOP40225 353 aa7.78□□□□□ -1.16
UBE4B-204ENST00000462658 STAT1P42224 750 aa7.78□□□□□ -1.16
UBE4B-204ENST00000462658 MFAP3P55082 362 aa7.78□□□□□ -1.16
UBE4B-204ENST00000462658 MGAT3Q09327 533 aa7.78□□□□□ -1.16
UBE4B-204ENST00000462658 DRAP1Q14919 205 aaPredicted RBP7.78□□□□□ -1.16
UBE4B-204ENST00000462658 ASIC2Q16515 512 aa7.78□□□□□ -1.16
UBE4B-204ENST00000462658 ANKS6Q68DC2 871 aa7.78□□□□□ -1.16
UBE4B-204ENST00000462658 TOGARAM2Q6ZUX3 1019 aa7.78□□□□□ -1.16
UBE4B-204ENST00000462658 FAM228AQ86W67 206 aa7.78□□□□□ -1.16
UBE4B-204ENST00000462658 ARHGEF19Q8IW93 802 aa7.78□□□□□ -1.16
UBE4B-204ENST00000462658 CCDC170Q8IYT3 715 aa7.78□□□□□ -1.16
UBE4B-204ENST00000462658 CCAR2Q8N163 923 aaKnown RBP7.78□□□□□ -1.16
UBE4B-204ENST00000462658 KAT5Q92993 513 aa7.78□□□□□ -1.16
UBE4B-204ENST00000462658 ANKRD36BP1Q96IX9 119 aa7.78□□□□□ -1.16
UBE4B-204ENST00000462658 CCDC42Q96M95 316 aa7.78□□□□□ -1.16
UBE4B-204ENST00000462658 NT5C1BQ96P26 610 aa7.78□□□□□ -1.16
UBE4B-204ENST00000462658 DEFB118Q96PH6 123 aa7.78□□□□□ -1.16
UBE4B-204ENST00000462658 CCDC94Q9BW85 323 aaPredicted RBP7.78□□□□□ -1.16
UBE4B-204ENST00000462658 EIF2AQ9BY44 585 aaKnown RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms