RNA–Protein interactions for RNA: ENST00000461043.6

ERGIC3-211, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-211ENST00000461043 GOLPH3Q9H4A6 298 aa12.39□□□□□ -0.43
ERGIC3-211ENST00000461043 PRDM16Q9HAZ2 1276 aa12.39□□□□□ -0.43
ERGIC3-211ENST00000461043 PDFQ9HBH1 243 aa12.39□□□□□ -0.43
ERGIC3-211ENST00000461043 KLHL11Q9NVR0 708 aa12.39□□□□□ -0.43
ERGIC3-211ENST00000461043 USP36Q9P275 1121 aaKnown RBP12.39□□□□□ -0.43
ERGIC3-211ENST00000461043 HYOU1Q9Y4L1 999 aa12.39□□□□□ -0.43
ERGIC3-211ENST00000461043 EML5Q05BV3 1969 aa12.39□□□□□ -0.43
ERGIC3-211ENST00000461043 ZSCAN5CA6NGD5 496 aaPredicted RBP12.38□□□□□ -0.43
ERGIC3-211ENST00000461043 DAPK3O43293 454 aa12.38□□□□□ -0.43
ERGIC3-211ENST00000461043 PSTPIP1O43586 416 aa12.38□□□□□ -0.43
ERGIC3-211ENST00000461043 BUB1O43683 1085 aa12.38□□□□□ -0.43
ERGIC3-211ENST00000461043 RPP40O75818 363 aaKnown RBP12.38□□□□□ -0.43
ERGIC3-211ENST00000461043 AMPD1P23109 780 aa12.38□□□□□ -0.43
ERGIC3-211ENST00000461043 KDELR1P24390 212 aa12.38□□□□□ -0.43
ERGIC3-211ENST00000461043 NNMTP40261 264 aa12.38□□□□□ -0.43
ERGIC3-211ENST00000461043 RPS14P62263 151 aaKnown RBP12.38□□□□□ -0.43
ERGIC3-211ENST00000461043 ZBTB16Q05516 673 aa12.38□□□□□ -0.43
ERGIC3-211ENST00000461043 KRT81Q14533 505 aa12.38□□□□□ -0.43
ERGIC3-211ENST00000461043 ELAVL3Q14576 367 aaKnown RBP12.38□□□□□ -0.43
ERGIC3-211ENST00000461043 TAZQ16635 292 aa12.38□□□□□ -0.43
ERGIC3-211ENST00000461043 ANKRD20A8PQ5CZ79 823 aa12.38□□□□□ -0.43
ERGIC3-211ENST00000461043 C22orf39Q6P5X5 142 aa12.38□□□□□ -0.43
ERGIC3-211ENST00000461043 KIAA1328Q86T90 577 aa12.38□□□□□ -0.43
ERGIC3-211ENST00000461043 TP53INP2Q8IXH6 220 aa12.38□□□□□ -0.43
ERGIC3-211ENST00000461043 RHOT1Q8IXI2 618 aa12.38□□□□□ -0.43
ERGIC3-211ENST00000461043 TXLNBQ8N3L3 684 aa12.38□□□□□ -0.43
ERGIC3-211ENST00000461043 PQLC3Q8N755 202 aa12.38□□□□□ -0.43
ERGIC3-211ENST00000461043 ATP11CQ8NB49 1132 aa12.38□□□□□ -0.43
ERGIC3-211ENST00000461043 SUMF1Q8NBK3 374 aa12.38□□□□□ -0.43
ERGIC3-211ENST00000461043 KCTD6Q8NC69 237 aa12.38□□□□□ -0.43
ERGIC3-211ENST00000461043 VOPP1Q96AW1 172 aa12.38□□□□□ -0.43
ERGIC3-211ENST00000461043 ISG20Q96AZ6 181 aaKnown RBP12.38□□□□□ -0.43
ERGIC3-211ENST00000461043 CELF6Q96J87 481 aaKnown RBP12.38□□□□□ -0.43
ERGIC3-211ENST00000461043 CD93Q9NPY3 652 aa12.38□□□□□ -0.43
ERGIC3-211ENST00000461043 BCCIPQ9P287 314 aaKnown RBP eCLIP12.38□□□□□ -0.43
ERGIC3-211ENST00000461043 TRIM10Q9UDY6 481 aa12.38□□□□□ -0.43
ERGIC3-211ENST00000461043 ACTL7AQ9Y615 435 aa12.38□□□□□ -0.43
ERGIC3-211ENST00000461043 PLXND1Q9Y4D7 1925 aa12.38□□□□□ -0.43
ERGIC3-211ENST00000461043 OTOGLQ3ZCN5 2332 aa12.38□□□□□ -0.43
ERGIC3-211ENST00000461043 GRID2IPA4D2P6 1211 aa12.37□□□□□ -0.43
ERGIC3-211ENST00000461043 ALOX15BO15296 676 aa12.37□□□□□ -0.43
ERGIC3-211ENST00000461043 SPOPO43791 374 aa12.37□□□□□ -0.43
ERGIC3-211ENST00000461043 PRAMEF11O60813 436 aa12.37□□□□□ -0.43
ERGIC3-211ENST00000461043 GJC1P36383 396 aa12.37□□□□□ -0.43
ERGIC3-211ENST00000461043 PAPOLAP51003 745 aaKnown RBP12.37□□□□□ -0.43
ERGIC3-211ENST00000461043 GEMIN4P57678 1058 aaKnown RBP12.37□□□□□ -0.43
ERGIC3-211ENST00000461043 KIF5AQ12840 1032 aa12.37□□□□□ -0.43
ERGIC3-211ENST00000461043 PAFAH1B3Q15102 231 aaKnown RBP12.37□□□□□ -0.43
ERGIC3-211ENST00000461043 USP39Q53GS9 565 aaKnown RBP12.37□□□□□ -0.43
ERGIC3-211ENST00000461043 INO80DQ53TQ3 878 aaPredicted RBP12.37□□□□□ -0.43
ERGIC3-211ENST00000461043 NCBP2-AS2Q69YL0 99 aa12.37□□□□□ -0.43
ERGIC3-211ENST00000461043 TMCO3Q6UWJ1 677 aa12.37□□□□□ -0.43
ERGIC3-211ENST00000461043 ZNF662Q6ZS27 426 aa12.37□□□□□ -0.43
ERGIC3-211ENST00000461043 Q6ZVU0 165 aa12.37□□□□□ -0.43
ERGIC3-211ENST00000461043 MAP7D3Q8IWC1 876 aa12.37□□□□□ -0.43
ERGIC3-211ENST00000461043 PLPP6Q8IY26 295 aa12.37□□□□□ -0.43
ERGIC3-211ENST00000461043 STK40Q8N2I9 435 aa12.37□□□□□ -0.43
ERGIC3-211ENST00000461043 OR2A12Q8NGT7 310 aa12.37□□□□□ -0.43
ERGIC3-211ENST00000461043 SIPA1Q96FS4 1042 aa12.37□□□□□ -0.43
ERGIC3-211ENST00000461043 ZC3H10Q96K80 434 aaKnown RBP12.37□□□□□ -0.43
ERGIC3-211ENST00000461043 ITM2CQ9NQX7 267 aa12.37□□□□□ -0.43
ERGIC3-211ENST00000461043 MBD1Q9UIS9 605 aaPredicted RBP12.37□□□□□ -0.43
ERGIC3-211ENST00000461043 NYNRINQ9P2P1 1898 aaKnown RBP12.36□□□□□ -0.43
ERGIC3-211ENST00000461043 GVINP1Q7Z2Y8 2422 aa12.36□□□□□ -0.43
ERGIC3-211ENST00000461043 IGHV1OR15-9A0A0B4J2B8 117 aa12.36□□□□□ -0.43
ERGIC3-211ENST00000461043 ARHGAP42A6NI28 874 aa12.36□□□□□ -0.43
ERGIC3-211ENST00000461043 C10orf142B7Z368 130 aa12.36□□□□□ -0.43
ERGIC3-211ENST00000461043 J3KR12 359 aa12.36□□□□□ -0.43
ERGIC3-211ENST00000461043 MCF2LO15068 1137 aa12.36□□□□□ -0.43
ERGIC3-211ENST00000461043 ZNF217O75362 1048 aa12.36□□□□□ -0.43
ERGIC3-211ENST00000461043 PEX11BO96011 259 aa12.36□□□□□ -0.43
ERGIC3-211ENST00000461043 BCKDHBP21953 392 aa12.36□□□□□ -0.43
ERGIC3-211ENST00000461043 CTNNA1P35221 906 aaKnown RBP12.36□□□□□ -0.43
ERGIC3-211ENST00000461043 MARCKSL1P49006 195 aa12.36□□□□□ -0.43
ERGIC3-211ENST00000461043 TPMTP51580 245 aa12.36□□□□□ -0.43
ERGIC3-211ENST00000461043 GSE1Q14687 1217 aa12.36□□□□□ -0.43
ERGIC3-211ENST00000461043 ZNF776Q68DI1 518 aaPredicted RBP12.36□□□□□ -0.43
ERGIC3-211ENST00000461043 SLC9A4Q6AI14 798 aa12.36□□□□□ -0.43
ERGIC3-211ENST00000461043 KIAA1324Q6UXG2 1013 aaKnown RBP12.36□□□□□ -0.43
ERGIC3-211ENST00000461043 ARHGAP36Q6ZRI8 547 aa12.36□□□□□ -0.43
ERGIC3-211ENST00000461043 DAAM2Q86T65 1068 aa12.36□□□□□ -0.43
ERGIC3-211ENST00000461043 C11orf74Q86VG3 221 aa12.36□□□□□ -0.43
ERGIC3-211ENST00000461043 KATNAL2Q8IYT4 538 aa12.36□□□□□ -0.43
ERGIC3-211ENST00000461043 PGBD3Q8N328 593 aa12.36□□□□□ -0.43
ERGIC3-211ENST00000461043 FAM160A2Q8N612 972 aaPredicted RBP12.36□□□□□ -0.43
ERGIC3-211ENST00000461043 PCDH20Q8N6Y1 951 aaKnown RBP12.36□□□□□ -0.43
ERGIC3-211ENST00000461043 FRMD1Q8N878 549 aa12.36□□□□□ -0.43
ERGIC3-211ENST00000461043 NETO2Q8NC67 525 aa12.36□□□□□ -0.43
ERGIC3-211ENST00000461043 CASKIN2Q8WXE0 1202 aa12.36□□□□□ -0.43
ERGIC3-211ENST00000461043 RLN3Q8WXF3 142 aa12.36□□□□□ -0.43
ERGIC3-211ENST00000461043 PRCCQ92733 491 aaPredicted RBP12.36□□□□□ -0.43
ERGIC3-211ENST00000461043 KRT35Q92764 455 aa12.36□□□□□ -0.43
ERGIC3-211ENST00000461043 FAM131CQ96AQ9 280 aa12.36□□□□□ -0.43
ERGIC3-211ENST00000461043 RNF157Q96PX1 679 aa12.36□□□□□ -0.43
ERGIC3-211ENST00000461043 CALN1Q9BXU9 219 aa12.36□□□□□ -0.43
ERGIC3-211ENST00000461043 DUSP15Q9H1R2 295 aaPredicted RBP12.36□□□□□ -0.43
ERGIC3-211ENST00000461043 DDX56Q9NY93 547 aaKnown RBP12.36□□□□□ -0.43
ERGIC3-211ENST00000461043 PPM1HQ9ULR3 514 aa12.36□□□□□ -0.43
ERGIC3-211ENST00000461043 HPCAL4Q9UM19 191 aa12.36□□□□□ -0.43
ERGIC3-211ENST00000461043 SCML1Q9UN30 329 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms