RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 SOX13Q9UN79 622 aa14.39□□□□□ -0.11
ERCC3-205ENST00000460485 PLLPQ9Y342 182 aa14.39□□□□□ -0.11
ERCC3-205ENST00000460485 HBS1LQ9Y450 684 aaKnown RBP14.39□□□□□ -0.11
ERCC3-205ENST00000460485 SCN5AQ14524 2016 aa14.38□□□□□ -0.11
ERCC3-205ENST00000460485 IGLV3-10A0A075B6K4 115 aa14.38□□□□□ -0.11
ERCC3-205ENST00000460485 KCNK1O00180 336 aa14.38□□□□□ -0.11
ERCC3-205ENST00000460485 TIMM44O43615 452 aa14.38□□□□□ -0.11
ERCC3-205ENST00000460485 TBC1D4O60343 1298 aa14.38□□□□□ -0.11
ERCC3-205ENST00000460485 B4GALT3O60512 393 aa14.38□□□□□ -0.11
ERCC3-205ENST00000460485 NEBLO76041 1014 aa14.38□□□□□ -0.11
ERCC3-205ENST00000460485 PYGBP11216 843 aa14.38□□□□□ -0.11
ERCC3-205ENST00000460485 CCNB1P14635 433 aa14.38□□□□□ -0.11
ERCC3-205ENST00000460485 NFKB1P19838 968 aa14.38□□□□□ -0.11
ERCC3-205ENST00000460485 IBSPP21815 317 aaPredicted RBP14.38□□□□□ -0.11
ERCC3-205ENST00000460485 MGAT1P26572 445 aa14.38□□□□□ -0.11
ERCC3-205ENST00000460485 FOXN2P32314 431 aa14.38□□□□□ -0.11
ERCC3-205ENST00000460485 SPRP35270 261 aaPredicted RBP14.38□□□□□ -0.11
ERCC3-205ENST00000460485 MAPKAPK2P49137 400 aa14.38□□□□□ -0.11
ERCC3-205ENST00000460485 CCL23P55773 120 aa14.38□□□□□ -0.11
ERCC3-205ENST00000460485 MPP3Q13368 585 aa14.38□□□□□ -0.11
ERCC3-205ENST00000460485 ZKSCAN8Q15776 578 aaPredicted RBP14.38□□□□□ -0.11
ERCC3-205ENST00000460485 UGP2Q16851 508 aa14.38□□□□□ -0.11
ERCC3-205ENST00000460485 PDPK2PQ6A1A2 396 aa14.38□□□□□ -0.11
ERCC3-205ENST00000460485 POTEHQ6S545 545 aa14.38□□□□□ -0.11
ERCC3-205ENST00000460485 PACS1Q6VY07 963 aa14.38□□□□□ -0.11
ERCC3-205ENST00000460485 PRPF39Q86UA1 669 aaKnown RBP14.38□□□□□ -0.11
ERCC3-205ENST00000460485 C10orf67Q8IYJ2 551 aa14.38□□□□□ -0.11
ERCC3-205ENST00000460485 CRIPAKQ8N1N5 446 aa14.38□□□□□ -0.11
ERCC3-205ENST00000460485 DNAAF3Q8N9W5 541 aa14.38□□□□□ -0.11
ERCC3-205ENST00000460485 NSMCE1Q8WV22 266 aa14.38□□□□□ -0.11
ERCC3-205ENST00000460485 OXNAD1Q96HP4 312 aaPredicted RBP14.38□□□□□ -0.11
ERCC3-205ENST00000460485 TTPALQ9BTX7 342 aa14.38□□□□□ -0.11
ERCC3-205ENST00000460485 TRIM55Q9BYV6 548 aa14.38□□□□□ -0.11
ERCC3-205ENST00000460485 PRKD2Q9BZL6 878 aa14.38□□□□□ -0.11
ERCC3-205ENST00000460485 ZYG11BQ9C0D3 744 aa14.38□□□□□ -0.11
ERCC3-205ENST00000460485 FAM96AQ9H5X1 160 aa14.38□□□□□ -0.11
ERCC3-205ENST00000460485 MANSC1Q9H8J5 431 aa14.38□□□□□ -0.11
ERCC3-205ENST00000460485 MLXIPLQ9NP71 852 aa14.38□□□□□ -0.11
ERCC3-205ENST00000460485 TXLNGQ9NUQ3 528 aa14.38□□□□□ -0.11
ERCC3-205ENST00000460485 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.38□□□□□ -0.11
ERCC3-205ENST00000460485 TMEM248Q9NWD8 314 aa14.38□□□□□ -0.11
ERCC3-205ENST00000460485 MARCH5Q9NX47 278 aa14.38□□□□□ -0.11
ERCC3-205ENST00000460485 SYBUQ9NX95 663 aa14.38□□□□□ -0.11
ERCC3-205ENST00000460485 DNAJB4Q9UDY4 337 aa14.38□□□□□ -0.11
ERCC3-205ENST00000460485 DCDC2Q9UHG0 476 aa14.38□□□□□ -0.11
ERCC3-205ENST00000460485 MAFFQ9ULX9 164 aa14.38□□□□□ -0.11
ERCC3-205ENST00000460485 BACE2Q9Y5Z0 518 aa14.38□□□□□ -0.11
ERCC3-205ENST00000460485 RPS6KL1Q9Y6S9 549 aa14.38□□□□□ -0.11
ERCC3-205ENST00000460485 MTMR11A4FU01 709 aa14.37□□□□□ -0.11
ERCC3-205ENST00000460485 ZBBXA8MT70 800 aa14.37□□□□□ -0.11
ERCC3-205ENST00000460485 C2CD2LO14523 706 aa14.37□□□□□ -0.11
ERCC3-205ENST00000460485 ZBTB24O43167 697 aaPredicted RBP14.37□□□□□ -0.11
ERCC3-205ENST00000460485 RFPL1O75677 317 aa14.37□□□□□ -0.11
ERCC3-205ENST00000460485 IGLV3-27P01718 113 aa14.37□□□□□ -0.11
ERCC3-205ENST00000460485 CSH1P0DML2 217 aa14.37□□□□□ -0.11
ERCC3-205ENST00000460485 CSH2P0DML3 217 aa14.37□□□□□ -0.11
ERCC3-205ENST00000460485 HAPLN1P10915 354 aaPredicted RBP14.37□□□□□ -0.11
ERCC3-205ENST00000460485 PAMP19021 973 aa14.37□□□□□ -0.11
ERCC3-205ENST00000460485 ADRA1DP25100 572 aa14.37□□□□□ -0.11
ERCC3-205ENST00000460485 SCTRP47872 440 aa14.37□□□□□ -0.11
ERCC3-205ENST00000460485 SERPINB4P48594 390 aa14.37□□□□□ -0.11
ERCC3-205ENST00000460485 TUFMP49411 452 aaKnown RBP14.37□□□□□ -0.11
ERCC3-205ENST00000460485 SERPINB8P50452 374 aa14.37□□□□□ -0.11
ERCC3-205ENST00000460485 SESN2P58004 480 aaPredicted RBP14.37□□□□□ -0.11
ERCC3-205ENST00000460485 YBEYP58557 167 aaPredicted RBP14.37□□□□□ -0.11
ERCC3-205ENST00000460485 ZBTB17Q13105 803 aa14.37□□□□□ -0.11
ERCC3-205ENST00000460485 LAMB3Q13751 1172 aa14.37□□□□□ -0.11
ERCC3-205ENST00000460485 HNRNPDQ14103 355 aaKnown RBP14.37□□□□□ -0.11
ERCC3-205ENST00000460485 SLC14A2Q15849 920 aa14.37□□□□□ -0.11
ERCC3-205ENST00000460485 PARP15Q460N3 678 aa14.37□□□□□ -0.11
ERCC3-205ENST00000460485 TMCO4Q5TGY1 634 aa14.37□□□□□ -0.11
ERCC3-205ENST00000460485 KLHDC10Q6PID8 442 aa14.37□□□□□ -0.11
ERCC3-205ENST00000460485 RASSF3Q86WH2 238 aa14.37□□□□□ -0.11
ERCC3-205ENST00000460485 ARHGAP12Q8IWW6 846 aa14.37□□□□□ -0.11
ERCC3-205ENST00000460485 GPR65Q8IYL9 337 aa14.37□□□□□ -0.11
ERCC3-205ENST00000460485 MPP5Q8N3R9 675 aa14.37□□□□□ -0.11
ERCC3-205ENST00000460485 SREK1Q8WXA9 508 aaKnown RBP14.37□□□□□ -0.11
ERCC3-205ENST00000460485 SERAC1Q96JX3 654 aa14.37□□□□□ -0.11
ERCC3-205ENST00000460485 C7orf26Q96N11 449 aa14.37□□□□□ -0.11
ERCC3-205ENST00000460485 TUBB6Q9BUF5 446 aa14.37□□□□□ -0.11
ERCC3-205ENST00000460485 TSSK1BQ9BXA7 367 aa14.37□□□□□ -0.11
ERCC3-205ENST00000460485 NMUR1Q9HB89 426 aa14.37□□□□□ -0.11
ERCC3-205ENST00000460485 GLOD4Q9HC38 313 aa14.37□□□□□ -0.11
ERCC3-205ENST00000460485 HS3ST4Q9Y661 456 aa14.37□□□□□ -0.11
ERCC3-205ENST00000460485 EPOPA6NHQ4 379 aa14.36□□□□□ -0.11
ERCC3-205ENST00000460485 MAFKO60675 156 aa14.36□□□□□ -0.11
ERCC3-205ENST00000460485 EFCAB14O75071 495 aa14.36□□□□□ -0.11
ERCC3-205ENST00000460485 ZDHHC11BP0C7U3 371 aa14.36□□□□□ -0.11
ERCC3-205ENST00000460485 CD68P34810 354 aaPredicted RBP14.36□□□□□ -0.11
ERCC3-205ENST00000460485 SLC11A1P49279 550 aa14.36□□□□□ -0.11
ERCC3-205ENST00000460485 LIG3P49916 1009 aa14.36□□□□□ -0.11
ERCC3-205ENST00000460485 TUBP50607 506 aa14.36□□□□□ -0.11
ERCC3-205ENST00000460485 RASSF2P50749 326 aa14.36□□□□□ -0.11
ERCC3-205ENST00000460485 RENBPP51606 427 aa14.36□□□□□ -0.11
ERCC3-205ENST00000460485 USP41Q3LFD5 358 aa14.36□□□□□ -0.11
ERCC3-205ENST00000460485 TTC31Q49AM3 519 aaPredicted RBP14.36□□□□□ -0.11
ERCC3-205ENST00000460485 PCID2Q5JVF3 399 aa14.36□□□□□ -0.11
ERCC3-205ENST00000460485 SYCP2LQ5T4T6 812 aa14.36□□□□□ -0.11
ERCC3-205ENST00000460485 SLC8B1Q6J4K2 584 aa14.36□□□□□ -0.11
ERCC3-205ENST00000460485 GJD3Q8N144 294 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms