RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 RALGPS1Q5JS13 557 aa11.25□□□□□ -0.61
SMNDC1-203ENST00000460483 MARC1Q5VT66 337 aa11.25□□□□□ -0.61
SMNDC1-203ENST00000460483 AFMIDQ63HM1 303 aa11.25□□□□□ -0.61
SMNDC1-203ENST00000460483 HEATR6Q6AI08 1181 aaKnown RBP11.25□□□□□ -0.61
SMNDC1-203ENST00000460483 SERPINA13PQ6UXR4 307 aa11.25□□□□□ -0.61
SMNDC1-203ENST00000460483 TRIM67Q6ZTA4 783 aa11.25□□□□□ -0.61
SMNDC1-203ENST00000460483 CPNE8Q86YQ8 564 aa11.25□□□□□ -0.61
SMNDC1-203ENST00000460483 CCDC13Q8IYE1 715 aa11.25□□□□□ -0.61
SMNDC1-203ENST00000460483 RASGEF1CQ8N431 466 aa11.25□□□□□ -0.61
SMNDC1-203ENST00000460483 PQLC3Q8N755 202 aa11.25□□□□□ -0.61
SMNDC1-203ENST00000460483 ZNF513Q8N8E2 541 aaPredicted RBP11.25□□□□□ -0.61
SMNDC1-203ENST00000460483 GRK7Q8WTQ7 553 aa11.25□□□□□ -0.61
SMNDC1-203ENST00000460483 ISG20Q96AZ6 181 aaKnown RBP11.25□□□□□ -0.61
SMNDC1-203ENST00000460483 WDR24Q96S15 920 aa11.25□□□□□ -0.61
SMNDC1-203ENST00000460483 PSMB7Q99436 277 aa11.25□□□□□ -0.61
SMNDC1-203ENST00000460483 SLC39A8Q9C0K1 460 aa11.25□□□□□ -0.61
SMNDC1-203ENST00000460483 LTB4R2Q9NPC1 389 aa11.25□□□□□ -0.61
SMNDC1-203ENST00000460483 GOLGA6AQ9NYA3 693 aa11.25□□□□□ -0.61
SMNDC1-203ENST00000460483 DTLQ9NZJ0 730 aa11.25□□□□□ -0.61
SMNDC1-203ENST00000460483 ZNF212Q9UDV6 495 aa11.25□□□□□ -0.61
SMNDC1-203ENST00000460483 SEPT3Q9UH03 358 aa11.25□□□□□ -0.61
SMNDC1-203ENST00000460483 NDRG2Q9UN36 371 aaKnown RBP11.25□□□□□ -0.61
SMNDC1-203ENST00000460483 NEU3Q9UQ49 428 aa11.25□□□□□ -0.61
SMNDC1-203ENST00000460483 HS3ST2Q9Y278 367 aa11.25□□□□□ -0.61
SMNDC1-203ENST00000460483 A0A0D9SEW6 157 aa11.24□□□□□ -0.61
SMNDC1-203ENST00000460483 TARSL2A2RTX5 802 aaKnown RBP11.24□□□□□ -0.61
SMNDC1-203ENST00000460483 CCDC188H7C350 402 aa11.24□□□□□ -0.61
SMNDC1-203ENST00000460483 KRIT1O00522 736 aa11.24□□□□□ -0.61
SMNDC1-203ENST00000460483 NDC80O14777 642 aa11.24□□□□□ -0.61
SMNDC1-203ENST00000460483 MATN3O15232 486 aa11.24□□□□□ -0.61
SMNDC1-203ENST00000460483 ZNF500O60304 480 aaPredicted RBP11.24□□□□□ -0.61
SMNDC1-203ENST00000460483 PRAMEF11O60813 436 aa11.24□□□□□ -0.61
SMNDC1-203ENST00000460483 URI1O94763 535 aaPredicted RBP11.24□□□□□ -0.61
SMNDC1-203ENST00000460483 ALDH1A2O94788 518 aa11.24□□□□□ -0.61
SMNDC1-203ENST00000460483 CA4P22748 312 aa11.24□□□□□ -0.61
SMNDC1-203ENST00000460483 MZF1P28698 734 aaPredicted RBP11.24□□□□□ -0.61
SMNDC1-203ENST00000460483 NTSR1P30989 418 aa11.24□□□□□ -0.61
SMNDC1-203ENST00000460483 CXCR5P32302 372 aa11.24□□□□□ -0.61
SMNDC1-203ENST00000460483 RPS9P46781 194 aaKnown RBP11.24□□□□□ -0.61
SMNDC1-203ENST00000460483 SOX9P48436 509 aa11.24□□□□□ -0.61
SMNDC1-203ENST00000460483 CLCN5P51795 746 aa11.24□□□□□ -0.61
SMNDC1-203ENST00000460483 EIF3EP60228 445 aaKnown RBP11.24□□□□□ -0.61
SMNDC1-203ENST00000460483 SNRPD1P62314 119 aaKnown RBP11.24□□□□□ -0.61
SMNDC1-203ENST00000460483 PPIDQ08752 370 aaKnown RBP11.24□□□□□ -0.61
SMNDC1-203ENST00000460483 AP1B1Q10567 949 aa11.24□□□□□ -0.61
SMNDC1-203ENST00000460483 NOMO1Q15155 1222 aa11.24□□□□□ -0.61
SMNDC1-203ENST00000460483 GEN1Q17RS7 908 aa11.24□□□□□ -0.61
SMNDC1-203ENST00000460483 GAB4Q2WGN9 574 aa11.24□□□□□ -0.61
SMNDC1-203ENST00000460483 DRICH1Q6PGQ1 229 aaPredicted RBP11.24□□□□□ -0.61
SMNDC1-203ENST00000460483 DARS2Q6PI48 645 aaKnown RBP11.24□□□□□ -0.61
SMNDC1-203ENST00000460483 ADIPOR2Q86V24 386 aa11.24□□□□□ -0.61
SMNDC1-203ENST00000460483 PCDH20Q8N6Y1 951 aaKnown RBP11.24□□□□□ -0.61
SMNDC1-203ENST00000460483 CCHCR1Q8TD31 782 aa11.24□□□□□ -0.61
SMNDC1-203ENST00000460483 CHFRQ96EP1 664 aa11.24□□□□□ -0.61
SMNDC1-203ENST00000460483 HMCESQ96FZ2 354 aa11.24□□□□□ -0.61
SMNDC1-203ENST00000460483 CELF6Q96J87 481 aaKnown RBP11.24□□□□□ -0.61
SMNDC1-203ENST00000460483 LRIG1Q96JA1 1093 aa11.24□□□□□ -0.61
SMNDC1-203ENST00000460483 CINPQ9BW66 212 aaPredicted RBP11.24□□□□□ -0.61
SMNDC1-203ENST00000460483 MAGEB5Q9BZ81 275 aa11.24□□□□□ -0.61
SMNDC1-203ENST00000460483 TBC1D17Q9HA65 648 aa11.24□□□□□ -0.61
SMNDC1-203ENST00000460483 LMAN1LQ9HAT1 526 aa11.24□□□□□ -0.61
SMNDC1-203ENST00000460483 POLMQ9NP87 494 aaPredicted RBP11.24□□□□□ -0.61
SMNDC1-203ENST00000460483 VPS51Q9UID3 782 aa11.24□□□□□ -0.61
SMNDC1-203ENST00000460483 TRHDEQ9UKU6 1024 aa11.24□□□□□ -0.61
SMNDC1-203ENST00000460483 ERVW-1Q9UQF0 538 aa11.24□□□□□ -0.61
SMNDC1-203ENST00000460483 OR51B4Q9Y5P0 310 aa11.24□□□□□ -0.61
SMNDC1-203ENST00000460483 ZNF638Q14966 1978 aaKnown RBP11.24□□□□□ -0.61
SMNDC1-203ENST00000460483 NOTCH4Q99466 2003 aa11.24□□□□□ -0.61
SMNDC1-203ENST00000460483 EDDM13A0A1B0GTR0 161 aa11.23□□□□□ -0.61
SMNDC1-203ENST00000460483 A0A1W2PQ67 120 aa11.23□□□□□ -0.61
SMNDC1-203ENST00000460483 TNFRSF10AO00220 468 aa11.23□□□□□ -0.61
SMNDC1-203ENST00000460483 MFSD11O43934 449 aa11.23□□□□□ -0.61
SMNDC1-203ENST00000460483 IGSF6O95976 241 aa11.23□□□□□ -0.61
SMNDC1-203ENST00000460483 GAS8O95995 478 aa11.23□□□□□ -0.61
SMNDC1-203ENST00000460483 RBP3P10745 1247 aa11.23□□□□□ -0.61
SMNDC1-203ENST00000460483 CCNB1P14635 433 aa11.23□□□□□ -0.61
SMNDC1-203ENST00000460483 SERPINH1P50454 418 aaKnown RBP11.23□□□□□ -0.61
SMNDC1-203ENST00000460483 TUBB4BP68371 445 aa11.23□□□□□ -0.61
SMNDC1-203ENST00000460483 OTUD4Q01804 1114 aaKnown RBP11.23□□□□□ -0.61
SMNDC1-203ENST00000460483 GBE1Q04446 702 aa11.23□□□□□ -0.61
SMNDC1-203ENST00000460483 NSUN2Q08J23 767 aaKnown RBP eCLIP11.23□□□□□ -0.61
SMNDC1-203ENST00000460483 KLF1Q13351 362 aaPredicted RBP11.23□□□□□ -0.61
SMNDC1-203ENST00000460483 BYSLQ13895 437 aaKnown RBP11.23□□□□□ -0.61
SMNDC1-203ENST00000460483 CCINQ13939 588 aa11.23□□□□□ -0.61
SMNDC1-203ENST00000460483 PRPSAP1Q14558 356 aa11.23□□□□□ -0.61
SMNDC1-203ENST00000460483 WHAMMP3Q1A5X7 153 aa11.23□□□□□ -0.61
SMNDC1-203ENST00000460483 FUT11Q495W5 492 aa11.23□□□□□ -0.61
SMNDC1-203ENST00000460483 SLC45A4Q5BKX6 768 aa11.23□□□□□ -0.61
SMNDC1-203ENST00000460483 ITPRIPL1Q6GPH6 555 aa11.23□□□□□ -0.61
SMNDC1-203ENST00000460483 CCDC70Q6NSX1 233 aa11.23□□□□□ -0.61
SMNDC1-203ENST00000460483 GSTA5Q7RTV2 222 aa11.23□□□□□ -0.61
SMNDC1-203ENST00000460483 C12orf40Q86WS4 652 aa11.23□□□□□ -0.61
SMNDC1-203ENST00000460483 C17orf53Q8N3J3 647 aaPredicted RBP11.23□□□□□ -0.61
SMNDC1-203ENST00000460483 PHTF2Q8N3S3 785 aa11.23□□□□□ -0.61
SMNDC1-203ENST00000460483 FLCNQ8NFG4 579 aa11.23□□□□□ -0.61
SMNDC1-203ENST00000460483 PJA1Q8NG27 643 aa11.23□□□□□ -0.61
SMNDC1-203ENST00000460483 OR7D4Q8NG98 312 aa11.23□□□□□ -0.61
SMNDC1-203ENST00000460483 ACTL9Q8TC94 416 aa11.23□□□□□ -0.61
SMNDC1-203ENST00000460483 MYEOVQ96EZ4 313 aa11.23□□□□□ -0.61
SMNDC1-203ENST00000460483 ALG14Q96F25 216 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms