RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 TPK1Q9H3S4 243 aa10.6□□□□□ -0.71
HERC4-207ENST00000460168 NOD2Q9HC29 1040 aa10.6□□□□□ -0.71
HERC4-207ENST00000460168 OLA1Q9NTK5 396 aaKnown RBP10.6□□□□□ -0.71
HERC4-207ENST00000460168 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.6□□□□□ -0.71
HERC4-207ENST00000460168 ARHGEF38Q9NXL2 777 aa10.6□□□□□ -0.71
HERC4-207ENST00000460168 DTLQ9NZJ0 730 aa10.6□□□□□ -0.71
HERC4-207ENST00000460168 HSFX1Q9UBD0 423 aa10.6□□□□□ -0.71
HERC4-207ENST00000460168 SATB2Q9UPW6 733 aa10.6□□□□□ -0.71
HERC4-207ENST00000460168 GREB1Q4ZG55 1949 aa10.6□□□□□ -0.71
HERC4-207ENST00000460168 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.6□□□□□ -0.71
HERC4-207ENST00000460168 TNFRSF10AO00220 468 aa10.6□□□□□ -0.71
HERC4-207ENST00000460168 DNALI1O14645 258 aaPredicted RBP10.6□□□□□ -0.71
HERC4-207ENST00000460168 TP73O15350 636 aa10.6□□□□□ -0.71
HERC4-207ENST00000460168 MFSD11O43934 449 aa10.6□□□□□ -0.71
HERC4-207ENST00000460168 PAGE1O75459 146 aa10.6□□□□□ -0.71
HERC4-207ENST00000460168 LRIG2O94898 1065 aa10.6□□□□□ -0.71
HERC4-207ENST00000460168 SEC24AO95486 1093 aa10.6□□□□□ -0.71
HERC4-207ENST00000460168 ATP6V1G2O95670 118 aa10.6□□□□□ -0.71
HERC4-207ENST00000460168 TBX18O95935 607 aa10.6□□□□□ -0.71
HERC4-207ENST00000460168 SRGAP2BP0DMP2 458 aa10.6□□□□□ -0.71
HERC4-207ENST00000460168 PORP16435 677 aaPredicted RBP10.6□□□□□ -0.71
HERC4-207ENST00000460168 ATP2A2P16615 1042 aaKnown RBP10.6□□□□□ -0.71
HERC4-207ENST00000460168 RBL1P28749 1068 aa10.6□□□□□ -0.71
HERC4-207ENST00000460168 EPHB2P29323 1055 aa10.6□□□□□ -0.71
HERC4-207ENST00000460168 HSD17B3P37058 310 aa10.6□□□□□ -0.71
HERC4-207ENST00000460168 ZNF135P52742 658 aaPredicted RBP10.6□□□□□ -0.71
HERC4-207ENST00000460168 RAB33AQ14088 237 aa10.6□□□□□ -0.71
HERC4-207ENST00000460168 PPP2R5DQ14738 602 aa10.6□□□□□ -0.71
HERC4-207ENST00000460168 RASIP1Q5U651 963 aa10.6□□□□□ -0.71
HERC4-207ENST00000460168 ALS2CLQ60I27 953 aa10.6□□□□□ -0.71
HERC4-207ENST00000460168 MIB1Q86YT6 1006 aa10.6□□□□□ -0.71
HERC4-207ENST00000460168 HERC6Q8IVU3 1022 aa10.6□□□□□ -0.71
HERC4-207ENST00000460168 CDKL3Q8IVW4 592 aaPredicted RBP10.6□□□□□ -0.71
HERC4-207ENST00000460168 TAB3Q8N5C8 712 aaPredicted RBP10.6□□□□□ -0.71
HERC4-207ENST00000460168 LRRN4Q8WUT4 740 aa10.6□□□□□ -0.71
HERC4-207ENST00000460168 MRRFQ96E11 262 aaKnown RBP10.6□□□□□ -0.71
HERC4-207ENST00000460168 GIMAP5Q96F15 307 aa10.6□□□□□ -0.71
HERC4-207ENST00000460168 RAD9AQ99638 391 aa10.6□□□□□ -0.71
HERC4-207ENST00000460168 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.6□□□□□ -0.71
HERC4-207ENST00000460168 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.6□□□□□ -0.71
HERC4-207ENST00000460168 ZMYND8Q9ULU4 1186 aaPredicted RBP10.6□□□□□ -0.71
HERC4-207ENST00000460168 TLR6Q9Y2C9 796 aa10.6□□□□□ -0.71
HERC4-207ENST00000460168 FADS3Q9Y5Q0 445 aa10.6□□□□□ -0.71
HERC4-207ENST00000460168 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.59□□□□□ -0.71
HERC4-207ENST00000460168 BCLAF3A2AJT9 711 aaKnown RBP10.59□□□□□ -0.71
HERC4-207ENST00000460168 NDC80O14777 642 aa10.59□□□□□ -0.71
HERC4-207ENST00000460168 TLR5O60602 858 aa10.59□□□□□ -0.71
HERC4-207ENST00000460168 PAHP00439 452 aa10.59□□□□□ -0.71
HERC4-207ENST00000460168 CSH1P0DML2 217 aa10.59□□□□□ -0.71
HERC4-207ENST00000460168 CSH2P0DML3 217 aa10.59□□□□□ -0.71
HERC4-207ENST00000460168 SLC2A3P11169 496 aa10.59□□□□□ -0.71
HERC4-207ENST00000460168 ERCC2P18074 760 aa10.59□□□□□ -0.71
HERC4-207ENST00000460168 CES1P23141 567 aa10.59□□□□□ -0.71
HERC4-207ENST00000460168 HCAR3P49019 387 aa10.59□□□□□ -0.71
HERC4-207ENST00000460168 CENPAP49450 140 aa10.59□□□□□ -0.71
HERC4-207ENST00000460168 CCNG1P51959 295 aa10.59□□□□□ -0.71
HERC4-207ENST00000460168 NRLP54845 237 aa10.59□□□□□ -0.71
HERC4-207ENST00000460168 E2F2Q14209 437 aa10.59□□□□□ -0.71
HERC4-207ENST00000460168 VEPH1Q14D04 833 aa10.59□□□□□ -0.71
HERC4-207ENST00000460168 SLC45A4Q5BKX6 768 aa10.59□□□□□ -0.71
HERC4-207ENST00000460168 WDR45BQ5MNZ6 344 aa10.59□□□□□ -0.71
HERC4-207ENST00000460168 HEATR6Q6AI08 1181 aaKnown RBP10.59□□□□□ -0.71
HERC4-207ENST00000460168 RWDD4Q6NW29 188 aaKnown RBP10.59□□□□□ -0.71
HERC4-207ENST00000460168 PDZD4Q76G19 769 aaPredicted RBP10.59□□□□□ -0.71
HERC4-207ENST00000460168 PDCD7Q8N8D1 485 aaKnown RBP10.59□□□□□ -0.71
HERC4-207ENST00000460168 NCSTNQ92542 709 aa10.59□□□□□ -0.71
HERC4-207ENST00000460168 CLP1Q92989 425 aaKnown RBP10.59□□□□□ -0.71
HERC4-207ENST00000460168 HAPLN3Q96S86 360 aa10.59□□□□□ -0.71
HERC4-207ENST00000460168 PRPF18Q99633 342 aaKnown RBP10.59□□□□□ -0.71
HERC4-207ENST00000460168 LBHD1Q9BQE6 289 aaPredicted RBP10.59□□□□□ -0.71
HERC4-207ENST00000460168 TTLL2Q9BWV7 592 aa10.59□□□□□ -0.71
HERC4-207ENST00000460168 OSBPL2Q9H1P3 480 aa10.59□□□□□ -0.71
HERC4-207ENST00000460168 MTIF3Q9H2K0 278 aaKnown RBP10.59□□□□□ -0.71
HERC4-207ENST00000460168 PARVBQ9HBI1 364 aa10.59□□□□□ -0.71
HERC4-207ENST00000460168 MRGBPQ9NV56 204 aa10.59□□□□□ -0.71
HERC4-207ENST00000460168 MARCH2Q9P0N8 246 aa10.59□□□□□ -0.71
HERC4-207ENST00000460168 YIPF1Q9Y548 306 aa10.59□□□□□ -0.71
HERC4-207ENST00000460168 SNX10Q9Y5X0 201 aa10.59□□□□□ -0.71
HERC4-207ENST00000460168 DCLK1O15075 740 aa10.58□□□□□ -0.72
HERC4-207ENST00000460168 APOEP02649 317 aa10.58□□□□□ -0.72
HERC4-207ENST00000460168 CTSAP10619 480 aa10.58□□□□□ -0.72
HERC4-207ENST00000460168 SERPINB6P35237 376 aa10.58□□□□□ -0.72
HERC4-207ENST00000460168 RPL22P35268 128 aaKnown RBP10.58□□□□□ -0.72
HERC4-207ENST00000460168 CREMQ03060 361 aa10.58□□□□□ -0.72
HERC4-207ENST00000460168 CMPK2Q5EBM0 449 aa10.58□□□□□ -0.72
HERC4-207ENST00000460168 TMTC4Q5T4D3 741 aa10.58□□□□□ -0.72
HERC4-207ENST00000460168 HIBCHQ6NVY1 386 aaPredicted RBP10.58□□□□□ -0.72
HERC4-207ENST00000460168 RHBDF2Q6PJF5 856 aa10.58□□□□□ -0.72
HERC4-207ENST00000460168 TMC7Q7Z402 723 aa10.58□□□□□ -0.72
HERC4-207ENST00000460168 NETO2Q8NC67 525 aa10.58□□□□□ -0.72
HERC4-207ENST00000460168 CCNYQ8ND76 341 aa10.58□□□□□ -0.72
HERC4-207ENST00000460168 PDZD8Q8NEN9 1154 aa10.58□□□□□ -0.72
HERC4-207ENST00000460168 TFB1MQ8WVM0 346 aaKnown RBP10.58□□□□□ -0.72
HERC4-207ENST00000460168 HERVK_113Q902F9 699 aa10.58□□□□□ -0.72
HERC4-207ENST00000460168 IFT43Q96FT9 208 aa10.58□□□□□ -0.72
HERC4-207ENST00000460168 FCRL2Q96LA5 508 aaPredicted RBP10.58□□□□□ -0.72
HERC4-207ENST00000460168 ZIM3Q96PE6 472 aa10.58□□□□□ -0.72
HERC4-207ENST00000460168 FERMT1Q9BQL6 677 aa10.58□□□□□ -0.72
HERC4-207ENST00000460168 HTATIP2Q9BUP3 242 aa10.58□□□□□ -0.72
HERC4-207ENST00000460168 ZBP1Q9H171 429 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms