RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 CHORDC1Q9UHD1 332 aaPredicted RBP9.91□□□□□ -0.82
UFD1-205ENST00000459854 RPTORQ8N122 1335 aa9.91□□□□□ -0.82
UFD1-205ENST00000459854 RGSL1A5PLK6 1076 aa9.91□□□□□ -0.82
UFD1-205ENST00000459854 SPATA31C2B4DYI2 1134 aa9.91□□□□□ -0.82
UFD1-205ENST00000459854 DFFAO00273 331 aa9.91□□□□□ -0.82
UFD1-205ENST00000459854 RPL21P46778 160 aaKnown RBP9.91□□□□□ -0.82
UFD1-205ENST00000459854 IFI35P80217 286 aaPredicted RBP9.91□□□□□ -0.82
UFD1-205ENST00000459854 LY6KQ17RY6 165 aa9.91□□□□□ -0.82
UFD1-205ENST00000459854 ZNF792Q3KQV3 632 aa9.91□□□□□ -0.82
UFD1-205ENST00000459854 CELF3Q5SZQ8 465 aaKnown RBP9.91□□□□□ -0.82
UFD1-205ENST00000459854 BTBD8Q5XKL5 378 aa9.91□□□□□ -0.82
UFD1-205ENST00000459854 FBXO46Q6PJ61 603 aaPredicted RBP9.91□□□□□ -0.82
UFD1-205ENST00000459854 ITFG1Q8TB96 612 aa9.91□□□□□ -0.82
UFD1-205ENST00000459854 AGAP3Q96P47 875 aa9.91□□□□□ -0.82
UFD1-205ENST00000459854 UBP1Q9NZI7 540 aa9.91□□□□□ -0.82
UFD1-205ENST00000459854 ZNF624Q9P2J8 865 aaPredicted RBP9.91□□□□□ -0.82
UFD1-205ENST00000459854 INPP4BO15327 924 aa9.91□□□□□ -0.82
UFD1-205ENST00000459854 FAM153BP0C7A2 387 aa9.91□□□□□ -0.82
UFD1-205ENST00000459854 NNMTP40261 264 aa9.91□□□□□ -0.82
UFD1-205ENST00000459854 CLCN2P51788 898 aa9.91□□□□□ -0.82
UFD1-205ENST00000459854 IRF5Q13568 498 aa9.91□□□□□ -0.82
UFD1-205ENST00000459854 ZNF268Q14587 947 aaPredicted RBP9.91□□□□□ -0.82
UFD1-205ENST00000459854 NFIL3Q16649 462 aa9.91□□□□□ -0.82
UFD1-205ENST00000459854 FAM153CQ494X1 144 aa9.91□□□□□ -0.82
UFD1-205ENST00000459854 TIGD7Q6NT04 549 aaPredicted RBP9.91□□□□□ -0.82
UFD1-205ENST00000459854 CATSPER4Q7RTX7 472 aa9.91□□□□□ -0.82
UFD1-205ENST00000459854 BNIPLQ7Z465 357 aa9.91□□□□□ -0.82
UFD1-205ENST00000459854 SNX32Q86XE0 403 aa9.91□□□□□ -0.82
UFD1-205ENST00000459854 RDH11Q8TC12 318 aa9.91□□□□□ -0.82
UFD1-205ENST00000459854 HDAC7Q8WUI4 952 aa9.91□□□□□ -0.82
UFD1-205ENST00000459854 RHOBTB2Q9BYZ6 727 aa9.91□□□□□ -0.82
UFD1-205ENST00000459854 EPB41L4BQ9H329 900 aa9.91□□□□□ -0.82
UFD1-205ENST00000459854 TMEM216Q9P0N5 145 aa9.91□□□□□ -0.82
UFD1-205ENST00000459854 SH3BP4Q9P0V3 963 aa9.91□□□□□ -0.82
UFD1-205ENST00000459854 SLC12A4Q9UP95 1085 aa9.91□□□□□ -0.82
UFD1-205ENST00000459854 FARP1Q9Y4F1 1045 aaPredicted RBP9.91□□□□□ -0.82
UFD1-205ENST00000459854 FAM86B1E9PN63 330 aa9.9□□□□□ -0.82
UFD1-205ENST00000459854 SLC37A4O43826 429 aa9.9□□□□□ -0.82
UFD1-205ENST00000459854 HS6ST1O60243 411 aa9.9□□□□□ -0.82
UFD1-205ENST00000459854 DUSP11O75319 330 aaKnown RBP9.9□□□□□ -0.82
UFD1-205ENST00000459854 VPS26AO75436 327 aa9.9□□□□□ -0.82
UFD1-205ENST00000459854 CNMDO75829 334 aa9.9□□□□□ -0.82
UFD1-205ENST00000459854 FAM86B2P0C5J1 330 aa9.9□□□□□ -0.82
UFD1-205ENST00000459854 TCF4P15884 667 aa9.9□□□□□ -0.82
UFD1-205ENST00000459854 UBA1P22314 1058 aaKnown RBP9.9□□□□□ -0.82
UFD1-205ENST00000459854 KLK7P49862 253 aa9.9□□□□□ -0.82
UFD1-205ENST00000459854 OSTNP61366 133 aa9.9□□□□□ -0.82
UFD1-205ENST00000459854 FOXD4Q12950 439 aaPredicted RBP9.9□□□□□ -0.82
UFD1-205ENST00000459854 AUHQ13825 339 aaKnown RBP9.9□□□□□ -0.82
UFD1-205ENST00000459854 NDUFAF6Q330K2 333 aa9.9□□□□□ -0.82
UFD1-205ENST00000459854 FUT11Q495W5 492 aa9.9□□□□□ -0.82
UFD1-205ENST00000459854 GLRA4Q5JXX5 417 aa9.9□□□□□ -0.82
UFD1-205ENST00000459854 DGKKQ5KSL6 1271 aa9.9□□□□□ -0.82
UFD1-205ENST00000459854 POTEHQ6S545 545 aa9.9□□□□□ -0.82
UFD1-205ENST00000459854 C16orf62Q7Z3J2 963 aa9.9□□□□□ -0.82
UFD1-205ENST00000459854 CACTIN-AS1Q8N1I8 211 aa9.9□□□□□ -0.82
UFD1-205ENST00000459854 SLC25A41Q8N5S1 370 aa9.9□□□□□ -0.82
UFD1-205ENST00000459854 SLC5A5Q92911 643 aa9.9□□□□□ -0.82
UFD1-205ENST00000459854 SH3KBP1Q96B97 665 aa9.9□□□□□ -0.82
UFD1-205ENST00000459854 PRKD2Q9BZL6 878 aa9.9□□□□□ -0.82
UFD1-205ENST00000459854 PNPLA8Q9NP80 782 aa9.9□□□□□ -0.82
UFD1-205ENST00000459854 ABCB10Q9NRK6 738 aa9.9□□□□□ -0.82
UFD1-205ENST00000459854 ITGA11Q9UKX5 1188 aa9.9□□□□□ -0.82
UFD1-205ENST00000459854 COQ6Q9Y2Z9 468 aa9.9□□□□□ -0.82
UFD1-205ENST00000459854 TRIM43BA6NCK2 446 aa9.9□□□□□ -0.82
UFD1-205ENST00000459854 DCDC2CA8MYV0 355 aa9.9□□□□□ -0.82
UFD1-205ENST00000459854 M0QX08 132 aa9.9□□□□□ -0.82
UFD1-205ENST00000459854 PLK4O00444 970 aa9.9□□□□□ -0.82
UFD1-205ENST00000459854 PGAM1P18669 254 aa9.9□□□□□ -0.82
UFD1-205ENST00000459854 NMT1P30419 496 aaKnown RBP9.9□□□□□ -0.82
UFD1-205ENST00000459854 YWHABP31946 246 aaKnown RBP9.9□□□□□ -0.82
UFD1-205ENST00000459854 C1QBPQ07021 282 aaKnown RBP9.9□□□□□ -0.82
UFD1-205ENST00000459854 MPP3Q13368 585 aa9.9□□□□□ -0.82
UFD1-205ENST00000459854 ZNF284Q2VY69 593 aa9.9□□□□□ -0.82
UFD1-205ENST00000459854 PRAMEF19Q5SWL8 479 aa9.9□□□□□ -0.82
UFD1-205ENST00000459854 N4BP2L1Q5TBK1 243 aaPredicted RBP9.9□□□□□ -0.82
UFD1-205ENST00000459854 PSMA8Q8TAA3 256 aa9.9□□□□□ -0.82
UFD1-205ENST00000459854 TMC2Q8TDI7 906 aa9.9□□□□□ -0.82
UFD1-205ENST00000459854 PYDC1Q8WXC3 89 aa9.9□□□□□ -0.82
UFD1-205ENST00000459854 MNTQ99583 582 aa9.9□□□□□ -0.82
UFD1-205ENST00000459854 FKBP14Q9NWM8 211 aa9.9□□□□□ -0.82
UFD1-205ENST00000459854 GNPTGQ9UJJ9 305 aa9.9□□□□□ -0.82
UFD1-205ENST00000459854 RNF112Q9ULX5 631 aa9.9□□□□□ -0.82
UFD1-205ENST00000459854 ITM2BQ9Y287 266 aa9.9□□□□□ -0.82
UFD1-205ENST00000459854 CLUHO75153 1309 aa9.9□□□□□ -0.82
UFD1-205ENST00000459854 DPPA5A6NC42 116 aa9.9□□□□□ -0.82
UFD1-205ENST00000459854 LOC110117498-PIK3R3F6TDL0 507 aa9.9□□□□□ -0.82
UFD1-205ENST00000459854 TGDSO95455 350 aa9.9□□□□□ -0.82
UFD1-205ENST00000459854 ATF6P18850 670 aa9.9□□□□□ -0.82
UFD1-205ENST00000459854 PRDX6P30041 224 aa9.9□□□□□ -0.82
UFD1-205ENST00000459854 RPL14P50914 215 aaKnown RBP9.9□□□□□ -0.82
UFD1-205ENST00000459854 GALK1P51570 392 aa9.9□□□□□ -0.82
UFD1-205ENST00000459854 NEK3P51956 506 aa9.9□□□□□ -0.82
UFD1-205ENST00000459854 CDC42P60953 191 aa9.9□□□□□ -0.82
UFD1-205ENST00000459854 NME3Q13232 169 aa9.9□□□□□ -0.82
UFD1-205ENST00000459854 PQLC1Q8N2U9 271 aa9.9□□□□□ -0.82
UFD1-205ENST00000459854 PIK3R3Q92569 461 aa9.9□□□□□ -0.82
UFD1-205ENST00000459854 PURBQ96QR8 312 aaKnown RBP9.9□□□□□ -0.82
UFD1-205ENST00000459854 TBCBQ99426 244 aa9.9□□□□□ -0.82
UFD1-205ENST00000459854 TMEM109Q9BVC6 243 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms