RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 CDYLQ9Y232 598 aa9□□□□□ -0.97
HDAC3-202ENST00000459727 ACOT9Q9Y305 439 aa9□□□□□ -0.97
HDAC3-202ENST00000459727 PSAT1Q9Y617 370 aa9□□□□□ -0.97
HDAC3-202ENST00000459727 COL4A4P53420 1690 aaPredicted RBP9□□□□□ -0.97
HDAC3-202ENST00000459727 POLR2AP24928 1970 aaKnown RBP8.99□□□□□ -0.97
HDAC3-202ENST00000459727 SYNJ2BP-COX16A0A087WUM0 186 aa8.99□□□□□ -0.97
HDAC3-202ENST00000459727 A0A088AWK7 358 aa8.99□□□□□ -0.97
HDAC3-202ENST00000459727 RGSL1A5PLK6 1076 aa8.99□□□□□ -0.97
HDAC3-202ENST00000459727 C2orf71A6NGG8 1288 aa8.99□□□□□ -0.97
HDAC3-202ENST00000459727 GLTPD2A6NH11 291 aa8.99□□□□□ -0.97
HDAC3-202ENST00000459727 YJEFN3A6XGL0 299 aa8.99□□□□□ -0.97
HDAC3-202ENST00000459727 G3V2L1 256 aa8.99□□□□□ -0.97
HDAC3-202ENST00000459727 MATN2O00339 956 aa8.99□□□□□ -0.97
HDAC3-202ENST00000459727 CLDN5O00501 218 aa8.99□□□□□ -0.97
HDAC3-202ENST00000459727 CASQ2O14958 399 aaPredicted RBP8.99□□□□□ -0.97
HDAC3-202ENST00000459727 MATN3O15232 486 aa8.99□□□□□ -0.97
HDAC3-202ENST00000459727 TREHO43280 583 aa8.99□□□□□ -0.97
HDAC3-202ENST00000459727 ITM2AO43736 263 aa8.99□□□□□ -0.97
HDAC3-202ENST00000459727 AHCYL1O43865 530 aa8.99□□□□□ -0.97
HDAC3-202ENST00000459727 PENKP01210 267 aaPredicted RBP8.99□□□□□ -0.97
HDAC3-202ENST00000459727 COX4I1P13073 169 aa8.99□□□□□ -0.97
HDAC3-202ENST00000459727 AKR1A1P14550 325 aa8.99□□□□□ -0.97
HDAC3-202ENST00000459727 STMN1P16949 149 aa8.99□□□□□ -0.97
HDAC3-202ENST00000459727 NFKB1P19838 968 aa8.99□□□□□ -0.97
HDAC3-202ENST00000459727 NCF2P19878 526 aaPredicted RBP8.99□□□□□ -0.97
HDAC3-202ENST00000459727 GLDCP23378 1020 aa8.99□□□□□ -0.97
HDAC3-202ENST00000459727 CCR1P32246 355 aa8.99□□□□□ -0.97
HDAC3-202ENST00000459727 PPARGP37231 505 aaPredicted RBP8.99□□□□□ -0.97
HDAC3-202ENST00000459727 SLC26A3P40879 764 aa8.99□□□□□ -0.97
HDAC3-202ENST00000459727 ABL2P42684 1182 aa8.99□□□□□ -0.97
HDAC3-202ENST00000459727 CSRP3P50461 194 aa8.99□□□□□ -0.97
HDAC3-202ENST00000459727 MTTPP55157 894 aa8.99□□□□□ -0.97
HDAC3-202ENST00000459727 NAA20P61599 178 aa8.99□□□□□ -0.97
HDAC3-202ENST00000459727 CRADDP78560 199 aa8.99□□□□□ -0.97
HDAC3-202ENST00000459727 POU4F1Q01851 419 aa8.99□□□□□ -0.97
HDAC3-202ENST00000459727 TBL3Q12788 808 aaKnown RBP8.99□□□□□ -0.97
HDAC3-202ENST00000459727 GRIK3Q13003 919 aa8.99□□□□□ -0.97
HDAC3-202ENST00000459727 KLF10Q13118 480 aa8.99□□□□□ -0.97
HDAC3-202ENST00000459727 MSLNQ13421 630 aaPredicted RBP8.99□□□□□ -0.97
HDAC3-202ENST00000459727 UBAP2LQ14157 1087 aaKnown RBP8.99□□□□□ -0.97
HDAC3-202ENST00000459727 USP10Q14694 798 aaKnown RBP8.99□□□□□ -0.97
HDAC3-202ENST00000459727 FSCN1Q16658 493 aaKnown RBP8.99□□□□□ -0.97
HDAC3-202ENST00000459727 HSP90AA5PQ58FG0 334 aa8.99□□□□□ -0.97
HDAC3-202ENST00000459727 RARS2Q5T160 578 aaKnown RBP8.99□□□□□ -0.97
HDAC3-202ENST00000459727 ZNF618Q5T7W0 954 aa8.99□□□□□ -0.97
HDAC3-202ENST00000459727 SPRYD7Q5W111 196 aa8.99□□□□□ -0.97
HDAC3-202ENST00000459727 KIAA0930Q6ICG6 404 aaPredicted RBP8.99□□□□□ -0.97
HDAC3-202ENST00000459727 C16orf46Q6P387 395 aa8.99□□□□□ -0.97
HDAC3-202ENST00000459727 TMEM154Q6P9G4 183 aa8.99□□□□□ -0.97
HDAC3-202ENST00000459727 MRPL10Q7Z7H8 261 aaKnown RBP8.99□□□□□ -0.97
HDAC3-202ENST00000459727 ZC3HC1Q86WB0 502 aaKnown RBP8.99□□□□□ -0.97
HDAC3-202ENST00000459727 SLC22A9Q8IVM8 553 aa8.99□□□□□ -0.97
HDAC3-202ENST00000459727 ST13P4Q8IZP2 240 aaPredicted RBP8.99□□□□□ -0.97
HDAC3-202ENST00000459727 TMEM130Q8N3G9 435 aa8.99□□□□□ -0.97
HDAC3-202ENST00000459727 CNTD1Q8N815 330 aa8.99□□□□□ -0.97
HDAC3-202ENST00000459727 NPLOC4Q8TAT6 608 aa8.99□□□□□ -0.97
HDAC3-202ENST00000459727 DTX3LQ8TDB6 740 aa8.99□□□□□ -0.97
HDAC3-202ENST00000459727 TMEM40Q8WWA1 233 aa8.99□□□□□ -0.97
HDAC3-202ENST00000459727 PEX13Q92968 403 aa8.99□□□□□ -0.97
HDAC3-202ENST00000459727 PRR11Q96HE9 360 aaPredicted RBP8.99□□□□□ -0.97
HDAC3-202ENST00000459727 ZNF778Q96MU6 729 aa8.99□□□□□ -0.97
HDAC3-202ENST00000459727 FCRL3Q96P31 734 aaPredicted RBP8.99□□□□□ -0.97
HDAC3-202ENST00000459727 AGAP3Q96P47 875 aa8.99□□□□□ -0.97
HDAC3-202ENST00000459727 RANBP9Q96S59 729 aa8.99□□□□□ -0.97
HDAC3-202ENST00000459727 IL12RB2Q99665 862 aa8.99□□□□□ -0.97
HDAC3-202ENST00000459727 SMOQ99835 787 aa8.99□□□□□ -0.97
HDAC3-202ENST00000459727 TBL1YQ9BQ87 522 aa8.99□□□□□ -0.97
HDAC3-202ENST00000459727 EBF4Q9BQW3 602 aa8.99□□□□□ -0.97
HDAC3-202ENST00000459727 CENPKQ9BS16 269 aa8.99□□□□□ -0.97
HDAC3-202ENST00000459727 MTG1Q9BT17 334 aaPredicted RBP8.99□□□□□ -0.97
HDAC3-202ENST00000459727 TRMOQ9BU70 441 aa8.99□□□□□ -0.97
HDAC3-202ENST00000459727 FSD1LQ9BXM9 530 aa8.99□□□□□ -0.97
HDAC3-202ENST00000459727 KLHL4Q9C0H6 718 aa8.99□□□□□ -0.97
HDAC3-202ENST00000459727 C20orf27Q9GZN8 174 aa8.99□□□□□ -0.97
HDAC3-202ENST00000459727 TKTL2Q9H0I9 626 aa8.99□□□□□ -0.97
HDAC3-202ENST00000459727 MRPL46Q9H2W6 279 aaKnown RBP8.99□□□□□ -0.97
HDAC3-202ENST00000459727 SMOC2Q9H3U7 446 aa8.99□□□□□ -0.97
HDAC3-202ENST00000459727 TASP1Q9H6P5 420 aa8.99□□□□□ -0.97
HDAC3-202ENST00000459727 COG4Q9H9E3 785 aa8.99□□□□□ -0.97
HDAC3-202ENST00000459727 VPS45Q9NRW7 570 aa8.99□□□□□ -0.97
HDAC3-202ENST00000459727 ARHGEF38Q9NXL2 777 aa8.99□□□□□ -0.97
HDAC3-202ENST00000459727 NDUFA13Q9P0J0 144 aa8.99□□□□□ -0.97
HDAC3-202ENST00000459727 COX16Q9P0S2 106 aa8.99□□□□□ -0.97
HDAC3-202ENST00000459727 EPS15L1Q9UBC2 864 aa8.99□□□□□ -0.97
HDAC3-202ENST00000459727 STK39Q9UEW8 545 aa8.99□□□□□ -0.97
HDAC3-202ENST00000459727 CDH22Q9UJ99 828 aa8.99□□□□□ -0.97
HDAC3-202ENST00000459727 MFHAS1Q9Y4C4 1052 aa8.99□□□□□ -0.97
HDAC3-202ENST00000459727 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.99□□□□□ -0.97
HDAC3-202ENST00000459727 TSC2P49815 1807 aa8.98□□□□□ -0.97
HDAC3-202ENST00000459727 HEATR9A2RTY3 570 aa8.98□□□□□ -0.97
HDAC3-202ENST00000459727 WASH4PA8MWX3 477 aa8.98□□□□□ -0.97
HDAC3-202ENST00000459727 HHLA1C9JL84 531 aa8.98□□□□□ -0.97
HDAC3-202ENST00000459727 ZNF195O14628 629 aa8.98□□□□□ -0.97
HDAC3-202ENST00000459727 NRP1O14786 923 aa8.98□□□□□ -0.97
HDAC3-202ENST00000459727 IRAK2O43187 625 aa8.98□□□□□ -0.97
HDAC3-202ENST00000459727 ATP9BO43861 1147 aa8.98□□□□□ -0.97
HDAC3-202ENST00000459727 ZNF623O75123 536 aa8.98□□□□□ -0.97
HDAC3-202ENST00000459727 DUSP11O75319 330 aaKnown RBP8.98□□□□□ -0.97
HDAC3-202ENST00000459727 LYPLA1O75608 230 aaPredicted RBP8.98□□□□□ -0.97
HDAC3-202ENST00000459727 LRIG2O94898 1065 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms