RNA–Protein interactions for RNA: ENST00000459159.1

SNORD54-201, Transcript of small nucleolar RNA, C/D box 54, humanhuman

BASIC

Gene SNORD54, Length 67 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD54-201ENST00000459159 LMX1AQ8TE12 382 aa-1.9□□□□□ -2.71
SNORD54-201ENST00000459159 FCAMRQ8WWV6 532 aa-1.9□□□□□ -2.71
SNORD54-201ENST00000459159 CLEC4DQ8WXI8 215 aa-1.9□□□□□ -2.71
SNORD54-201ENST00000459159 BBXQ8WY36 941 aaPredicted RBP-1.9□□□□□ -2.71
SNORD54-201ENST00000459159 MYLIPQ8WY64 445 aa-1.9□□□□□ -2.71
SNORD54-201ENST00000459159 NR4A3Q92570 626 aa-1.9□□□□□ -2.71
SNORD54-201ENST00000459159 ANKRD9Q96BM1 317 aaPredicted RBP-1.9□□□□□ -2.71
SNORD54-201ENST00000459159 RHBDF1Q96CC6 855 aa-1.9□□□□□ -2.71
SNORD54-201ENST00000459159 DYNLL2Q96FJ2 89 aa-1.9□□□□□ -2.71
SNORD54-201ENST00000459159 TRMT61AQ96FX7 289 aaKnown RBP-1.9□□□□□ -2.71
SNORD54-201ENST00000459159 MFSD14AQ96MC6 490 aa-1.9□□□□□ -2.71
SNORD54-201ENST00000459159 TRERF1Q96PN7 1200 aa-1.9□□□□□ -2.71
SNORD54-201ENST00000459159 MXRA8Q9BRK3 442 aa-1.9□□□□□ -2.71
SNORD54-201ENST00000459159 MANSC1Q9H8J5 431 aa-1.9□□□□□ -2.71
SNORD54-201ENST00000459159 POPDC2Q9HBU9 364 aa-1.9□□□□□ -2.71
SNORD54-201ENST00000459159 JPH1Q9HDC5 661 aaPredicted RBP-1.9□□□□□ -2.71
SNORD54-201ENST00000459159 ARHGEF4Q9NR80 690 aa-1.9□□□□□ -2.71
SNORD54-201ENST00000459159 KCNQ5Q9NR82 932 aa-1.9□□□□□ -2.71
SNORD54-201ENST00000459159 TXLNGQ9NUQ3 528 aa-1.9□□□□□ -2.71
SNORD54-201ENST00000459159 EXD2Q9NVH0 621 aa-1.9□□□□□ -2.71
SNORD54-201ENST00000459159 MAP3K20Q9NYL2 800 aaKnown RBP-1.9□□□□□ -2.71
SNORD54-201ENST00000459159 PLK2Q9NYY3 685 aa-1.9□□□□□ -2.71
SNORD54-201ENST00000459159 RAI14Q9P0K7 980 aa-1.9□□□□□ -2.71
SNORD54-201ENST00000459159 PTGFRNQ9P2B2 879 aa-1.9□□□□□ -2.71
SNORD54-201ENST00000459159 HCSTQ9UBK5 93 aa-1.9□□□□□ -2.71
SNORD54-201ENST00000459159 DNAJB4Q9UDY4 337 aa-1.9□□□□□ -2.71
SNORD54-201ENST00000459159 PRODH2Q9UF12 536 aa-1.9□□□□□ -2.71
SNORD54-201ENST00000459159 KLK12Q9UKR0 248 aa-1.9□□□□□ -2.71
SNORD54-201ENST00000459159 BRPF3Q9ULD4 1205 aa-1.9□□□□□ -2.71
SNORD54-201ENST00000459159 PCDHA7Q9UN72 937 aa-1.9□□□□□ -2.71
SNORD54-201ENST00000459159 PCDHA12Q9UN75 941 aa-1.9□□□□□ -2.71
SNORD54-201ENST00000459159 SLC27A5Q9Y2P5 690 aa-1.9□□□□□ -2.71
SNORD54-201ENST00000459159 ADCY9O60503 1353 aa-1.9□□□□□ -2.71
SNORD54-201ENST00000459159 RALGAPA2Q2PPJ7 1873 aa-1.9□□□□□ -2.71
SNORD54-201ENST00000459159 NAV1Q8NEY1 1877 aa-1.9□□□□□ -2.71
SNORD54-201ENST00000459159 ARHGAP21Q5T5U3 1957 aa-1.9□□□□□ -2.71
SNORD54-201ENST00000459159 A0A0D9SG52 128 aa-1.91□□□□□ -2.72
SNORD54-201ENST00000459159 A0A0U1RQK1 487 aa-1.91□□□□□ -2.72
SNORD54-201ENST00000459159 A0A1W2PQ67 120 aa-1.91□□□□□ -2.72
SNORD54-201ENST00000459159 ZNF320A2RRD8 509 aa-1.91□□□□□ -2.72
SNORD54-201ENST00000459159 MEIOCA2RUB1 952 aa-1.91□□□□□ -2.72
SNORD54-201ENST00000459159 SH3D21A4FU49 640 aa-1.91□□□□□ -2.72
SNORD54-201ENST00000459159 USP17L3A6NCW0 530 aa-1.91□□□□□ -2.72
SNORD54-201ENST00000459159 C2CD4DB7Z1M9 353 aa-1.91□□□□□ -2.72
SNORD54-201ENST00000459159 ZNF878C9JN71 531 aa-1.91□□□□□ -2.72
SNORD54-201ENST00000459159 C5orf67F2Z3F1 127 aa-1.91□□□□□ -2.72
SNORD54-201ENST00000459159 H7C1Q1 480 aa-1.91□□□□□ -2.72
SNORD54-201ENST00000459159 TNFRSF11BO00300 401 aa-1.91□□□□□ -2.72
SNORD54-201ENST00000459159 SYT5O00445 386 aa-1.91□□□□□ -2.72
SNORD54-201ENST00000459159 TRIM38O00635 465 aa-1.91□□□□□ -2.72
SNORD54-201ENST00000459159 TRIM24O15164 1050 aa-1.91□□□□□ -2.72
SNORD54-201ENST00000459159 KLK10O43240 276 aa-1.91□□□□□ -2.72
SNORD54-201ENST00000459159 CACNG3O60359 315 aa-1.91□□□□□ -2.72
SNORD54-201ENST00000459159 B4GALT3O60512 393 aa-1.91□□□□□ -2.72
SNORD54-201ENST00000459159 ZG16O60844 167 aa-1.91□□□□□ -2.72
SNORD54-201ENST00000459159 OFD1O75665 1012 aa-1.91□□□□□ -2.72
SNORD54-201ENST00000459159 HEXIM1O94992 359 aaKnown RBP-1.91□□□□□ -2.72
SNORD54-201ENST00000459159 TBX6O95947 436 aaPredicted RBP-1.91□□□□□ -2.72
SNORD54-201ENST00000459159 CFDP00746 253 aaPredicted RBP-1.91□□□□□ -2.72
SNORD54-201ENST00000459159 TGFB1P01137 390 aa-1.91□□□□□ -2.72
SNORD54-201ENST00000459159 IGLV2-23P01705 113 aa-1.91□□□□□ -2.72
SNORD54-201ENST00000459159 PDHA1P08559 390 aa-1.91□□□□□ -2.72
SNORD54-201ENST00000459159 PDGFRAP16234 1089 aa-1.91□□□□□ -2.72
SNORD54-201ENST00000459159 ITGA2P17301 1181 aa-1.91□□□□□ -2.72
SNORD54-201ENST00000459159 JUNDP17535 347 aa-1.91□□□□□ -2.72
SNORD54-201ENST00000459159 TSPAN8P19075 237 aa-1.91□□□□□ -2.72
SNORD54-201ENST00000459159 GARTP22102 1010 aa-1.91□□□□□ -2.72
SNORD54-201ENST00000459159 WARSP23381 471 aaKnown RBP-1.91□□□□□ -2.72
SNORD54-201ENST00000459159 MCCP23508 829 aa-1.91□□□□□ -2.72
SNORD54-201ENST00000459159 AOAHP28039 575 aa-1.91□□□□□ -2.72
SNORD54-201ENST00000459159 CD1CP29017 333 aa-1.91□□□□□ -2.72
SNORD54-201ENST00000459159 MSX2P35548 267 aaPredicted RBP-1.91□□□□□ -2.72
SNORD54-201ENST00000459159 G6PCP35575 357 aa-1.91□□□□□ -2.72
SNORD54-201ENST00000459159 IGFALSP35858 605 aa-1.91□□□□□ -2.72
SNORD54-201ENST00000459159 GNALP38405 381 aa-1.91□□□□□ -2.72
SNORD54-201ENST00000459159 SLC19A1P41440 591 aa-1.91□□□□□ -2.72
SNORD54-201ENST00000459159 UQCRFS1P47985 274 aa-1.91□□□□□ -2.72
SNORD54-201ENST00000459159 RPL34P49207 117 aaKnown RBP-1.91□□□□□ -2.72
SNORD54-201ENST00000459159 KCNK10P57789 538 aa-1.91□□□□□ -2.72
SNORD54-201ENST00000459159 LMO4P61968 165 aa-1.91□□□□□ -2.72
SNORD54-201ENST00000459159 HLA-DRB3P79483 266 aa-1.91□□□□□ -2.72
SNORD54-201ENST00000459159 ZBTB17Q13105 803 aa-1.91□□□□□ -2.72
SNORD54-201ENST00000459159 USP4Q13107 963 aa-1.91□□□□□ -2.72
SNORD54-201ENST00000459159 MRPL49Q13405 166 aaKnown RBP-1.91□□□□□ -2.72
SNORD54-201ENST00000459159 SNW1Q13573 536 aaKnown RBP-1.91□□□□□ -2.72
SNORD54-201ENST00000459159 SF3A1Q15459 793 aaKnown RBP-1.91□□□□□ -2.72
SNORD54-201ENST00000459159 HLFQ16534 295 aa-1.91□□□□□ -2.72
SNORD54-201ENST00000459159 CYP51A1Q16850 503 aa-1.91□□□□□ -2.72
SNORD54-201ENST00000459159 KCTD19Q17RG1 926 aaPredicted RBP-1.91□□□□□ -2.72
SNORD54-201ENST00000459159 DEFB109BQ30KR1 87 aa-1.91□□□□□ -2.72
SNORD54-201ENST00000459159 PLEKHG6Q3KR16 790 aa-1.91□□□□□ -2.72
SNORD54-201ENST00000459159 FBXL19-AS1Q494R0 122 aa-1.91□□□□□ -2.72
SNORD54-201ENST00000459159 DCST2Q5T1A1 773 aa-1.91□□□□□ -2.72
SNORD54-201ENST00000459159 ZNF468Q5VIY5 522 aaPredicted RBP-1.91□□□□□ -2.72
SNORD54-201ENST00000459159 MBNL2Q5VZF2 373 aaKnown RBP-1.91□□□□□ -2.72
SNORD54-201ENST00000459159 PDPK2PQ6A1A2 396 aa-1.91□□□□□ -2.72
SNORD54-201ENST00000459159 GRAMD4Q6IC98 578 aa-1.91□□□□□ -2.72
SNORD54-201ENST00000459159 DNAJC24Q6P3W2 148 aa-1.91□□□□□ -2.72
SNORD54-201ENST00000459159 ZNF474Q6S9Z5 364 aaPredicted RBP-1.91□□□□□ -2.72
SNORD54-201ENST00000459159 PARM1Q6UWI2 310 aa-1.91□□□□□ -2.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms