RNA–Protein interactions for RNA: ENST00000457888.2

UBDP1-202, Transcript of ubiquitin D pseudogene 1, humanhuman

BASIC

Gene UBDP1, Length 382 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBDP1-202ENST00000457888 PRMT2P55345 433 aa4.31□□□□□ -1.72
UBDP1-202ENST00000457888 SOX8P57073 446 aa4.31□□□□□ -1.72
UBDP1-202ENST00000457888 ARHGAP1Q07960 439 aa4.31□□□□□ -1.72
UBDP1-202ENST00000457888 DAG1Q14118 895 aa4.31□□□□□ -1.72
UBDP1-202ENST00000457888 KCTD2Q14681 263 aa4.31□□□□□ -1.72
UBDP1-202ENST00000457888 KRT72Q14CN4 511 aa4.31□□□□□ -1.72
UBDP1-202ENST00000457888 TMEM95Q3KNT9 176 aa4.31□□□□□ -1.72
UBDP1-202ENST00000457888 CEP55Q53EZ4 464 aa4.31□□□□□ -1.72
UBDP1-202ENST00000457888 LCE1EQ5T753 118 aa4.31□□□□□ -1.72
UBDP1-202ENST00000457888 TSTD2Q5T7W7 516 aa4.31□□□□□ -1.72
UBDP1-202ENST00000457888 KIAA0895LQ68EN5 471 aa4.31□□□□□ -1.72
UBDP1-202ENST00000457888 ZNF529Q6P280 563 aa4.31□□□□□ -1.72
UBDP1-202ENST00000457888 PIK3AP1Q6ZUJ8 805 aa4.31□□□□□ -1.72
UBDP1-202ENST00000457888 NKAPQ8N5F7 415 aaKnown RBP4.31□□□□□ -1.72
UBDP1-202ENST00000457888 CCDC33Q8N5R6 958 aa4.31□□□□□ -1.72
UBDP1-202ENST00000457888 IL17RDQ8NFM7 739 aa4.31□□□□□ -1.72
UBDP1-202ENST00000457888 SPATA3Q8NHX4 192 aa4.31□□□□□ -1.72
UBDP1-202ENST00000457888 ETNPPLQ8TBG4 499 aa4.31□□□□□ -1.72
UBDP1-202ENST00000457888 KAT2BQ92831 832 aa4.31□□□□□ -1.72
UBDP1-202ENST00000457888 CUL5Q93034 780 aa4.31□□□□□ -1.72
UBDP1-202ENST00000457888 C18orf8Q96DM3 657 aa4.31□□□□□ -1.72
UBDP1-202ENST00000457888 C8orf76Q96K31 380 aa4.31□□□□□ -1.72
UBDP1-202ENST00000457888 ZNF48Q96MX3 618 aaPredicted RBP4.31□□□□□ -1.72
UBDP1-202ENST00000457888 CTAGE1Q96RT6 745 aa4.31□□□□□ -1.72
UBDP1-202ENST00000457888 IWS1Q96ST2 819 aa4.31□□□□□ -1.72
UBDP1-202ENST00000457888 MXRA8Q9BRK3 442 aa4.31□□□□□ -1.72
UBDP1-202ENST00000457888 ADGRE3Q9BY15 652 aa4.31□□□□□ -1.72
UBDP1-202ENST00000457888 TRIM54Q9BYV2 358 aa4.31□□□□□ -1.72
UBDP1-202ENST00000457888 FTOQ9C0B1 505 aaKnown RBP eCLIP4.31□□□□□ -1.72
UBDP1-202ENST00000457888 FOXP1Q9H334 677 aaPredicted RBP4.31□□□□□ -1.72
UBDP1-202ENST00000457888 ABHD16BQ9H3Z7 469 aa4.31□□□□□ -1.72
UBDP1-202ENST00000457888 KCNMB3Q9NPA1 279 aa4.31□□□□□ -1.72
UBDP1-202ENST00000457888 MRPS18AQ9NVS2 196 aaKnown RBP4.31□□□□□ -1.72
UBDP1-202ENST00000457888 SMC3Q9UQE7 1217 aa4.31□□□□□ -1.72
UBDP1-202ENST00000457888 WNT6Q9Y6F9 365 aa4.31□□□□□ -1.72
UBDP1-202ENST00000457888 LRRC37A2A6NM11 1700 aa4.31□□□□□ -1.72
UBDP1-202ENST00000457888 COL6A3P12111 3177 aa4.31□□□□□ -1.72
UBDP1-202ENST00000457888 TRIOBPQ9H2D6 2365 aa4.31□□□□□ -1.72
UBDP1-202ENST00000457888 CUL9Q8IWT3 2517 aa4.3□□□□□ -1.72
UBDP1-202ENST00000457888 CHD9Q3L8U1 2897 aa4.3□□□□□ -1.72
UBDP1-202ENST00000457888 PFASO15067 1338 aa4.3□□□□□ -1.72
UBDP1-202ENST00000457888 CNTNAP2Q9UHC6 1331 aa4.3□□□□□ -1.72
UBDP1-202ENST00000457888 A0A087WV62 115 aa4.3□□□□□ -1.72
UBDP1-202ENST00000457888 A0A087WWV3 80 aa4.3□□□□□ -1.72
UBDP1-202ENST00000457888 IGKV6D-21A0A0A0MT36 114 aa4.3□□□□□ -1.72
UBDP1-202ENST00000457888 ASB14A6NK59 587 aa4.3□□□□□ -1.72
UBDP1-202ENST00000457888 hCG_1984214I3L0E3 225 aa4.3□□□□□ -1.72
UBDP1-202ENST00000457888 APOL1O14791 398 aa4.3□□□□□ -1.72
UBDP1-202ENST00000457888 SEPT4O43236 478 aa4.3□□□□□ -1.72
UBDP1-202ENST00000457888 STX6O43752 255 aa4.3□□□□□ -1.72
UBDP1-202ENST00000457888 PSMD10O75832 226 aa4.3□□□□□ -1.72
UBDP1-202ENST00000457888 FGF18O76093 207 aa4.3□□□□□ -1.72
UBDP1-202ENST00000457888 IL18RAPO95256 599 aa4.3□□□□□ -1.72
UBDP1-202ENST00000457888 SGPL1O95470 568 aa4.3□□□□□ -1.72
UBDP1-202ENST00000457888 CCL5P13501 91 aa4.3□□□□□ -1.72
UBDP1-202ENST00000457888 HOXD10P28358 340 aa4.3□□□□□ -1.72
UBDP1-202ENST00000457888 GNA11P29992 359 aa4.3□□□□□ -1.72
UBDP1-202ENST00000457888 RPS16P62249 146 aaKnown RBP4.3□□□□□ -1.72
UBDP1-202ENST00000457888 HMGN5P82970 282 aaKnown RBP4.3□□□□□ -1.72
UBDP1-202ENST00000457888 AKAP17AQ02040 695 aaKnown RBP4.3□□□□□ -1.72
UBDP1-202ENST00000457888 FHL1Q13642 323 aa4.3□□□□□ -1.72
UBDP1-202ENST00000457888 KIF22Q14807 665 aa4.3□□□□□ -1.72
UBDP1-202ENST00000457888 STXBP2Q15833 593 aa4.3□□□□□ -1.72
UBDP1-202ENST00000457888 PKN2Q16513 984 aaKnown RBP4.3□□□□□ -1.72
UBDP1-202ENST00000457888 MPEG1Q2M385 716 aa4.3□□□□□ -1.72
UBDP1-202ENST00000457888 HSDL1Q3SXM5 330 aa4.3□□□□□ -1.72
UBDP1-202ENST00000457888 Q4G0T1 1027 aa4.3□□□□□ -1.72
UBDP1-202ENST00000457888 DUSP28Q4G0W2 176 aa4.3□□□□□ -1.72
UBDP1-202ENST00000457888 DGKKQ5KSL6 1271 aa4.3□□□□□ -1.72
UBDP1-202ENST00000457888 EMC10Q5UCC4 262 aa4.3□□□□□ -1.72
UBDP1-202ENST00000457888 ARHGEF16Q5VV41 709 aa4.3□□□□□ -1.72
UBDP1-202ENST00000457888 ZNF626Q68DY1 528 aa4.3□□□□□ -1.72
UBDP1-202ENST00000457888 FCRLBQ6BAA4 426 aa4.3□□□□□ -1.72
UBDP1-202ENST00000457888 GALNT17Q6IS24 598 aa4.3□□□□□ -1.72
UBDP1-202ENST00000457888 SEPT14Q6ZU15 432 aa4.3□□□□□ -1.72
UBDP1-202ENST00000457888 USP49Q70CQ1 688 aa4.3□□□□□ -1.72
UBDP1-202ENST00000457888 PEG10Q86TG7 708 aaKnown RBP4.3□□□□□ -1.72
UBDP1-202ENST00000457888 ZNF713Q8N859 430 aaPredicted RBP4.3□□□□□ -1.72
UBDP1-202ENST00000457888 PCSK9Q8NBP7 692 aaKnown RBP4.3□□□□□ -1.72
UBDP1-202ENST00000457888 RAET1EQ8TD07 263 aa4.3□□□□□ -1.72
UBDP1-202ENST00000457888 SOCS4Q8WXH5 440 aa4.3□□□□□ -1.72
UBDP1-202ENST00000457888 HERPUD2Q9BSE4 406 aa4.3□□□□□ -1.72
UBDP1-202ENST00000457888 MMTAG2Q9BU76 263 aaKnown RBP4.3□□□□□ -1.72
UBDP1-202ENST00000457888 PACSIN1Q9BY11 444 aa4.3□□□□□ -1.72
UBDP1-202ENST00000457888 UPF3AQ9H1J1 476 aaKnown RBP4.3□□□□□ -1.72
UBDP1-202ENST00000457888 AGO4Q9HCK5 861 aaKnown RBP4.3□□□□□ -1.72
UBDP1-202ENST00000457888 C6orf50Q9HD87 102 aa4.3□□□□□ -1.72
UBDP1-202ENST00000457888 STARD7Q9NQZ5 370 aa4.3□□□□□ -1.72
UBDP1-202ENST00000457888 FBXO34Q9NWN3 711 aa4.3□□□□□ -1.72
UBDP1-202ENST00000457888 PIH1D1Q9NWS0 290 aaKnown RBP4.3□□□□□ -1.72
UBDP1-202ENST00000457888 JKAMPQ9P055 326 aa4.3□□□□□ -1.72
UBDP1-202ENST00000457888 WRAP73Q9P2S5 460 aaPredicted RBP4.3□□□□□ -1.72
UBDP1-202ENST00000457888 SEC63Q9UGP8 760 aaKnown RBP4.3□□□□□ -1.72
UBDP1-202ENST00000457888 PNMA2Q9UL42 364 aa4.3□□□□□ -1.72
UBDP1-202ENST00000457888 ZDHHC8Q9ULC8 765 aa4.3□□□□□ -1.72
UBDP1-202ENST00000457888 AGAP1Q9UPQ3 857 aa4.3□□□□□ -1.72
UBDP1-202ENST00000457888 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.3□□□□□ -1.72
UBDP1-202ENST00000457888 CLIC4Q9Y696 253 aa4.3□□□□□ -1.72
UBDP1-202ENST00000457888 CHD7Q9P2D1 2997 aa4.3□□□□□ -1.72
UBDP1-202ENST00000457888 UNC80Q8N2C7 3258 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms