RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 LYPLA1O75608 230 aaPredicted RBP13.84□□□□□ -0.19
TOP3B-213ENST00000457179 GABBR2O75899 941 aa13.84□□□□□ -0.19
TOP3B-213ENST00000457179 TOP3BO95985 862 aaKnown RBP13.84□□□□□ -0.19
TOP3B-213ENST00000457179 SERPINA6P08185 405 aa13.84□□□□□ -0.19
TOP3B-213ENST00000457179 OCM2P0CE71 109 aa13.84□□□□□ -0.19
TOP3B-213ENST00000457179 OCMP0CE72 109 aaPredicted RBP13.84□□□□□ -0.19
TOP3B-213ENST00000457179 CA8P35219 290 aa13.84□□□□□ -0.19
TOP3B-213ENST00000457179 CRYBB1P53674 252 aaPredicted RBP13.84□□□□□ -0.19
TOP3B-213ENST00000457179 FCGRTP55899 365 aa13.84□□□□□ -0.19
TOP3B-213ENST00000457179 UBXN11Q5T124 520 aa13.84□□□□□ -0.19
TOP3B-213ENST00000457179 RARS2Q5T160 578 aaKnown RBP13.84□□□□□ -0.19
TOP3B-213ENST00000457179 ATG16L1Q676U5 607 aa13.84□□□□□ -0.19
TOP3B-213ENST00000457179 IFNLR1Q8IU57 520 aaPredicted RBP13.84□□□□□ -0.19
TOP3B-213ENST00000457179 KATNAL1Q9BW62 490 aa13.84□□□□□ -0.19
TOP3B-213ENST00000457179 FAM105AQ9NUU6 356 aa13.84□□□□□ -0.19
TOP3B-213ENST00000457179 TMEM98Q9Y2Y6 226 aa13.84□□□□□ -0.19
TOP3B-213ENST00000457179 LOC285556D6RIA3 1793 aa13.84□□□□□ -0.19
TOP3B-213ENST00000457179 MYBPHLA2RUH7 354 aa13.84□□□□□ -0.19
TOP3B-213ENST00000457179 DENRO43583 198 aaKnown RBP13.84□□□□□ -0.19
TOP3B-213ENST00000457179 CCNT2O60583 730 aaKnown RBP13.84□□□□□ -0.19
TOP3B-213ENST00000457179 UGT1A9O60656 530 aa13.84□□□□□ -0.19
TOP3B-213ENST00000457179 CBFA2T3O75081 653 aa13.84□□□□□ -0.19
TOP3B-213ENST00000457179 CHRNA1P02708 482 aa13.84□□□□□ -0.19
TOP3B-213ENST00000457179 CDKL1Q00532 357 aa13.84□□□□□ -0.19
TOP3B-213ENST00000457179 PDCD4Q53EL6 469 aaKnown RBP13.84□□□□□ -0.19
TOP3B-213ENST00000457179 OGFRL1Q5TC84 451 aaPredicted RBP13.84□□□□□ -0.19
TOP3B-213ENST00000457179 OSTM1Q86WC4 334 aa13.84□□□□□ -0.19
TOP3B-213ENST00000457179 ERI1Q8IV48 349 aaKnown RBP13.84□□□□□ -0.19
TOP3B-213ENST00000457179 DDI1Q8WTU0 396 aa13.84□□□□□ -0.19
TOP3B-213ENST00000457179 KBTBD7Q8WVZ9 684 aa13.84□□□□□ -0.19
TOP3B-213ENST00000457179 CNPY3Q9BT09 278 aa13.84□□□□□ -0.19
TOP3B-213ENST00000457179 CAAP1Q9H8G2 361 aa13.84□□□□□ -0.19
TOP3B-213ENST00000457179 PPCSQ9HAB8 311 aa13.84□□□□□ -0.19
TOP3B-213ENST00000457179 UGT1A7Q9HAW7 530 aa13.84□□□□□ -0.19
TOP3B-213ENST00000457179 UGT1A10Q9HAW8 530 aa13.84□□□□□ -0.19
TOP3B-213ENST00000457179 UGT1A8Q9HAW9 530 aa13.84□□□□□ -0.19
TOP3B-213ENST00000457179 PADI3Q9ULW8 664 aa13.84□□□□□ -0.19
TOP3B-213ENST00000457179 TCRBV9S1A1TA0A576 114 aa13.83□□□□□ -0.2
TOP3B-213ENST00000457179 TMX2-CTNND1H3BSU7 103 aa13.83□□□□□ -0.2
TOP3B-213ENST00000457179 ZBED1O96006 694 aa13.83□□□□□ -0.2
TOP3B-213ENST00000457179 IDO1P14902 403 aa13.83□□□□□ -0.2
TOP3B-213ENST00000457179 EIF2B2P49770 351 aaKnown RBP13.83□□□□□ -0.2
TOP3B-213ENST00000457179 ZNF143P52747 638 aaPredicted RBP13.83□□□□□ -0.2
TOP3B-213ENST00000457179 AHI1Q8N157 1196 aa13.83□□□□□ -0.2
TOP3B-213ENST00000457179 C3orf58Q8NDZ4 430 aa13.83□□□□□ -0.2
TOP3B-213ENST00000457179 SOCS4Q8WXH5 440 aa13.83□□□□□ -0.2
TOP3B-213ENST00000457179 ADAM2Q99965 735 aa13.83□□□□□ -0.2
TOP3B-213ENST00000457179 C1orf21Q9H246 121 aa13.83□□□□□ -0.2
TOP3B-213ENST00000457179 PRG3Q9Y2Y8 225 aaPredicted RBP13.83□□□□□ -0.2
TOP3B-213ENST00000457179 TTLL3Q9Y4R7 772 aa13.83□□□□□ -0.2
TOP3B-213ENST00000457179 C5orf42Q9H799 3197 aa13.83□□□□□ -0.2
TOP3B-213ENST00000457179 MYO7AQ13402 2215 aa13.83□□□□□ -0.2
TOP3B-213ENST00000457179 C2CD4BA6NLJ0 364 aa13.83□□□□□ -0.2
TOP3B-213ENST00000457179 DUSP11O75319 330 aaKnown RBP13.83□□□□□ -0.2
TOP3B-213ENST00000457179 THP07101 528 aa13.83□□□□□ -0.2
TOP3B-213ENST00000457179 MRPS6P82932 125 aaKnown RBP13.83□□□□□ -0.2
TOP3B-213ENST00000457179 CD300CQ08708 224 aa13.83□□□□□ -0.2
TOP3B-213ENST00000457179 PDAP1Q13442 181 aaKnown RBP13.83□□□□□ -0.2
TOP3B-213ENST00000457179 TGFBIQ15582 683 aa13.83□□□□□ -0.2
TOP3B-213ENST00000457179 NRF1Q16656 503 aa13.83□□□□□ -0.2
TOP3B-213ENST00000457179 OGFOD2Q6N063 350 aa13.83□□□□□ -0.2
TOP3B-213ENST00000457179 PCGF5Q86SE9 256 aa13.83□□□□□ -0.2
TOP3B-213ENST00000457179 CROCCP3Q8IVE0 287 aa13.83□□□□□ -0.2
TOP3B-213ENST00000457179 SIX6OS1Q8N1H7 587 aa13.83□□□□□ -0.2
TOP3B-213ENST00000457179 RNF148Q8N7C7 305 aa13.83□□□□□ -0.2
TOP3B-213ENST00000457179 B3GALNT2Q8NCR0 500 aa13.83□□□□□ -0.2
TOP3B-213ENST00000457179 CCNYQ8ND76 341 aa13.83□□□□□ -0.2
TOP3B-213ENST00000457179 CMASQ8NFW8 434 aaPredicted RBP13.83□□□□□ -0.2
TOP3B-213ENST00000457179 TSPAN14Q8NG11 270 aa13.83□□□□□ -0.2
TOP3B-213ENST00000457179 MCRS1Q96EZ8 462 aa13.83□□□□□ -0.2
TOP3B-213ENST00000457179 COX4I2Q96KJ9 171 aa13.83□□□□□ -0.2
TOP3B-213ENST00000457179 SENP8Q96LD8 212 aa13.83□□□□□ -0.2
TOP3B-213ENST00000457179 SNRNP25Q9BV90 132 aaKnown RBP13.83□□□□□ -0.2
TOP3B-213ENST00000457179 OSBPL6Q9BZF3 934 aa13.83□□□□□ -0.2
TOP3B-213ENST00000457179 CNTN3Q9P232 1028 aa13.83□□□□□ -0.2
TOP3B-213ENST00000457179 MGAMO43451 1857 aa13.83□□□□□ -0.2
TOP3B-213ENST00000457179 FUOMA2VDF0 154 aa13.82□□□□□ -0.2
TOP3B-213ENST00000457179 GRIA1P42261 906 aa13.82□□□□□ -0.2
TOP3B-213ENST00000457179 ARPP19P56211 112 aa13.82□□□□□ -0.2
TOP3B-213ENST00000457179 SLC2A7Q6PXP3 512 aa13.82□□□□□ -0.2
TOP3B-213ENST00000457179 HFE2Q6ZVN8 426 aa13.82□□□□□ -0.2
TOP3B-213ENST00000457179 CASP10Q92851 521 aa13.82□□□□□ -0.2
TOP3B-213ENST00000457179 MTG1Q9BT17 334 aaPredicted RBP13.82□□□□□ -0.2
TOP3B-213ENST00000457179 ZNF696Q9H7X3 374 aa13.82□□□□□ -0.2
TOP3B-213ENST00000457179 RSAD1Q9HA92 442 aa13.82□□□□□ -0.2
TOP3B-213ENST00000457179 TBC1D23Q9NUY8 699 aa13.82□□□□□ -0.2
TOP3B-213ENST00000457179 CSPG5O95196 566 aa13.82□□□□□ -0.2
TOP3B-213ENST00000457179 CD4P01730 458 aa13.82□□□□□ -0.2
TOP3B-213ENST00000457179 KPNA1P52294 538 aaPredicted RBP13.82□□□□□ -0.2
TOP3B-213ENST00000457179 PFKPQ01813 784 aa13.82□□□□□ -0.2
TOP3B-213ENST00000457179 SLC6A3Q01959 620 aa13.82□□□□□ -0.2
TOP3B-213ENST00000457179 GBE1Q04446 702 aa13.82□□□□□ -0.2
TOP3B-213ENST00000457179 INCA1Q0VD86 236 aa13.82□□□□□ -0.2
TOP3B-213ENST00000457179 ELMSAN1Q6PJG2 1045 aa13.82□□□□□ -0.2
TOP3B-213ENST00000457179 DEFB106AQ8N104 65 aa13.82□□□□□ -0.2
TOP3B-213ENST00000457179 CCDC185Q8N715 623 aa13.82□□□□□ -0.2
TOP3B-213ENST00000457179 C7orf26Q96N11 449 aa13.82□□□□□ -0.2
TOP3B-213ENST00000457179 HEPHQ9BQS7 1158 aa13.82□□□□□ -0.2
TOP3B-213ENST00000457179 TRPV6Q9H1D0 765 aa13.82□□□□□ -0.2
TOP3B-213ENST00000457179 PLEKHA5Q9HAU0 1116 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms