RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 BCL7BQ9BQE9 202 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 TINF2Q9BSI4 451 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 ERVK-5Q9HDB9 667 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 ADPRHL2Q9NX46 363 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.07□□□□□ -1.6
PCDH9-203ENST00000456367 GGA3Q9NZ52 723 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 FBXO40Q9UH90 709 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 CCNL1Q9UK58 526 aaPredicted RBP5.07□□□□□ -1.6
PCDH9-203ENST00000456367 RBMX2Q9Y388 322 aaKnown RBP5.07□□□□□ -1.6
PCDH9-203ENST00000456367 ATRNO75882 1429 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 UBAP1LF5GYI3 381 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 UBE2Q2LH0YL09 131 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 MYL12BO14950 172 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 RGS10O43665 173 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 MYCP01106 439 aaPredicted RBP5.07□□□□□ -1.6
PCDH9-203ENST00000456367 ERBB2P04626 1255 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 THRBP10828 461 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 MYL12AP19105 171 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 MAPK10P53779 464 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 CDC42P60953 191 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 CDC42EP1Q00587 391 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 STXBP2Q15833 593 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 FSCN1Q16658 493 aaKnown RBP5.07□□□□□ -1.6
PCDH9-203ENST00000456367 ZC3H12AQ5D1E8 599 aaKnown RBP5.07□□□□□ -1.6
PCDH9-203ENST00000456367 ANKS6Q68DC2 871 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 KCNMB4Q86W47 210 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 FAM126BQ8IXS8 530 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 TMEM132CQ8N3T6 1108 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.07□□□□□ -1.6
PCDH9-203ENST00000456367 TMIEQ8NEW7 156 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 HTRA1Q92743 480 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 GATA6Q92908 595 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 CLPTM1LQ96KA5 538 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 MRPL57Q9BQC6 102 aaKnown RBP5.07□□□□□ -1.6
PCDH9-203ENST00000456367 KCTD10Q9H3F6 313 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 KRCC1Q9NPI7 259 aaPredicted RBP5.07□□□□□ -1.6
PCDH9-203ENST00000456367 ZDHHC7Q9NXF8 308 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 GDAP2Q9NXN4 497 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 RNF112Q9ULX5 631 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 VPS4AQ9UN37 437 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 hCG_1818297A0A087WSY0 165 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 KRT87PA6NCN2 255 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 TTLL13PA6NNM8 815 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 H3BSA7 217 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 CYP27B1O15528 508 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 RNASEH1O60930 286 aaKnown RBP5.07□□□□□ -1.6
PCDH9-203ENST00000456367 NDUFS2O75306 463 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 EPN2O95208 641 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 SLC12A3P55017 1021 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 POU5F1Q01860 360 aaKnown RBP5.07□□□□□ -1.6
PCDH9-203ENST00000456367 ELP6Q0PNE2 266 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 DGCR6Q14129 220 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 ZNF235Q14590 738 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 ERAP2Q6P179 960 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 FAM228AQ86W67 206 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 WDR49Q8IV35 697 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 ASCC1Q8N9N2 400 aaKnown RBP5.07□□□□□ -1.6
PCDH9-203ENST00000456367 TAS1R2Q8TE23 839 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 KBTBD7Q8WVZ9 684 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 IPCEF1Q8WWN9 437 aaPredicted RBP5.07□□□□□ -1.6
PCDH9-203ENST00000456367 HTR3CQ8WXA8 447 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 MKL1Q969V6 931 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 TSEN34Q9BSV6 310 aaKnown RBP5.07□□□□□ -1.6
PCDH9-203ENST00000456367 PDCD10Q9BUL8 212 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 TLE6Q9H808 572 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 UBP1Q9NZI7 540 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 AKAP7Q9P0M2 348 aaPredicted RBP5.07□□□□□ -1.6
PCDH9-203ENST00000456367 SALL4Q9UJQ4 1053 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 PDE10AQ9Y233 779 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 SPATA31D1Q6ZQQ2 1576 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 FAM220BPB1ANY3 271 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 VPS26AO75436 327 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 NOL4O94818 638 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 IFNA7P01567 189 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 PRKCBP05771 671 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 PGK2P07205 417 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 FOSL1P15407 271 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 ATF4P18848 351 aaPredicted RBP5.07□□□□□ -1.6
PCDH9-203ENST00000456367 TGFBR2P37173 567 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 JAM2P57087 298 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 OR2B6P58173 313 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 GMFBP60983 142 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 OSTNP61366 133 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 RELAQ04206 551 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 MERTKQ12866 999 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 FAM187BQ17R55 369 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 EPC2Q52LR7 807 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 IQSEC1Q6DN90 963 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 FAAH2Q6GMR7 532 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 CDC73Q6P1J9 531 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 FBXO33Q7Z6M2 555 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 OR56A4Q8NGH8 313 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 URGCPQ8TCY9 931 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 C7orf43Q8WVR3 580 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 ZNF606Q8WXB4 792 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 FIG4Q92562 907 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 TNFRSF25Q93038 417 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 CIB1Q99828 191 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 ACAT2Q9BWD1 397 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 ACE2Q9BYF1 805 aaPredicted RBP5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms