RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 GLDCP23378 1020 aa21.71■■□□□ 1.07
HMGB3-205ENST00000455596 ETFBP38117 255 aa21.71■■□□□ 1.07
HMGB3-205ENST00000455596 MAPKAPK2P49137 400 aa21.71■■□□□ 1.07
HMGB3-205ENST00000455596 CCR5P51681 352 aa21.71■■□□□ 1.07
HMGB3-205ENST00000455596 METAP1P53582 386 aa21.71■■□□□ 1.07
HMGB3-205ENST00000455596 RPL7AP62424 266 aaKnown RBP21.71■■□□□ 1.07
HMGB3-205ENST00000455596 HLA-BQ31612 363 aa21.71■■□□□ 1.07
HMGB3-205ENST00000455596 PPP1R15BQ5SWA1 713 aa21.71■■□□□ 1.07
HMGB3-205ENST00000455596 RETSATQ6NUM9 610 aa21.71■■□□□ 1.07
HMGB3-205ENST00000455596 DCUN1D2Q6PH85 259 aa21.71■■□□□ 1.07
HMGB3-205ENST00000455596 ADAT2Q7Z6V5 191 aaKnown RBP21.71■■□□□ 1.07
HMGB3-205ENST00000455596 LUZP1Q86V48 1076 aa21.71■■□□□ 1.07
HMGB3-205ENST00000455596 TBC1D31Q96DN5 1066 aa21.71■■□□□ 1.07
HMGB3-205ENST00000455596 EDEM3Q9BZQ6 932 aa21.71■■□□□ 1.07
HMGB3-205ENST00000455596 HAUS4Q9H6D7 363 aa21.71■■□□□ 1.07
HMGB3-205ENST00000455596 TMEM248Q9NWD8 314 aa21.71■■□□□ 1.07
HMGB3-205ENST00000455596 TAS2R14Q9NYV8 317 aa21.71■■□□□ 1.07
HMGB3-205ENST00000455596 ANGPTL2Q9UKU9 493 aa21.71■■□□□ 1.07
HMGB3-205ENST00000455596 TPX2Q9ULW0 747 aaKnown RBP21.71■■□□□ 1.07
HMGB3-205ENST00000455596 TBC1D3DA0A087WVF3 549 aa21.7■■□□□ 1.06
HMGB3-205ENST00000455596 TBC1D3IA0A087WXS9 549 aa21.7■■□□□ 1.06
HMGB3-205ENST00000455596 TBC1D3EA0A087X179 549 aa21.7■■□□□ 1.06
HMGB3-205ENST00000455596 TBC1D3KA0A087X1G2 549 aa21.7■■□□□ 1.06
HMGB3-205ENST00000455596 TBC1D3FA6NER0 549 aaPredicted RBP21.7■■□□□ 1.06
HMGB3-205ENST00000455596 TMCO5BA8MYB1 307 aa21.7■■□□□ 1.06
HMGB3-205ENST00000455596 TBC1D3LB9A6J9 549 aa21.7■■□□□ 1.06
HMGB3-205ENST00000455596 FAM72CH0Y354 149 aa21.7■■□□□ 1.06
HMGB3-205ENST00000455596 PLK4O00444 970 aa21.7■■□□□ 1.06
HMGB3-205ENST00000455596 SMAD6O43541 496 aaKnown RBP21.7■■□□□ 1.06
HMGB3-205ENST00000455596 LRIG2O94898 1065 aa21.7■■□□□ 1.06
HMGB3-205ENST00000455596 TBC1D3HP0C7X1 549 aa21.7■■□□□ 1.06
HMGB3-205ENST00000455596 RACK1P63244 317 aaKnown RBP21.7■■□□□ 1.06
HMGB3-205ENST00000455596 SLC20A2Q08357 652 aa21.7■■□□□ 1.06
HMGB3-205ENST00000455596 SCAPQ12770 1279 aa21.7■■□□□ 1.06
HMGB3-205ENST00000455596 HNRNPDQ14103 355 aaKnown RBP21.7■■□□□ 1.06
HMGB3-205ENST00000455596 EFHC2Q5JST6 749 aa21.7■■□□□ 1.06
HMGB3-205ENST00000455596 FAM72AQ5TYM5 149 aa21.7■■□□□ 1.06
HMGB3-205ENST00000455596 TBC1D3GQ6DHY5 549 aa21.7■■□□□ 1.06
HMGB3-205ENST00000455596 TBC1D3CQ6IPX1 549 aa21.7■■□□□ 1.06
HMGB3-205ENST00000455596 FAM72DQ6L9T8 149 aa21.7■■□□□ 1.06
HMGB3-205ENST00000455596 SCYL2Q6P3W7 929 aa21.7■■□□□ 1.06
HMGB3-205ENST00000455596 C22orf39Q6P5X5 142 aa21.7■■□□□ 1.06
HMGB3-205ENST00000455596 NLRP14Q86W24 1093 aa21.7■■□□□ 1.06
HMGB3-205ENST00000455596 FAM72BQ86X60 149 aa21.7■■□□□ 1.06
HMGB3-205ENST00000455596 TBC1D3Q8IZP1 549 aaPredicted RBP21.7■■□□□ 1.06
HMGB3-205ENST00000455596 OR2A12Q8NGT7 310 aa21.7■■□□□ 1.06
HMGB3-205ENST00000455596 FAM131CQ96AQ9 280 aa21.7■■□□□ 1.06
HMGB3-205ENST00000455596 MAGEB5Q9BZ81 275 aa21.7■■□□□ 1.06
HMGB3-205ENST00000455596 TTYH3Q9C0H2 523 aa21.7■■□□□ 1.06
HMGB3-205ENST00000455596 KDM4CQ9H3R0 1056 aa21.7■■□□□ 1.06
HMGB3-205ENST00000455596 IL21RQ9HBE5 538 aa21.7■■□□□ 1.06
HMGB3-205ENST00000455596 ANKRD6Q9Y2G4 727 aa21.7■■□□□ 1.06
HMGB3-205ENST00000455596 NCOR2Q9Y618 2525 aa21.7■■□□□ 1.06
HMGB3-205ENST00000455596 C10orf142B7Z368 130 aa21.69■■□□□ 1.06
HMGB3-205ENST00000455596 ZMPSTE24O75844 475 aa21.69■■□□□ 1.06
HMGB3-205ENST00000455596 ZNF883P0CG24 379 aa21.69■■□□□ 1.06
HMGB3-205ENST00000455596 CHRNA3P32297 505 aa21.69■■□□□ 1.06
HMGB3-205ENST00000455596 PRKCIP41743 596 aa21.69■■□□□ 1.06
HMGB3-205ENST00000455596 RECQLP46063 649 aaPredicted RBP21.69■■□□□ 1.06
HMGB3-205ENST00000455596 SERPINH1P50454 418 aaKnown RBP21.69■■□□□ 1.06
HMGB3-205ENST00000455596 AIF1P55008 147 aa21.69■■□□□ 1.06
HMGB3-205ENST00000455596 FANCCQ00597 558 aa21.69■■□□□ 1.06
HMGB3-205ENST00000455596 KIF19Q2TAC6 998 aa21.69■■□□□ 1.06
HMGB3-205ENST00000455596 POM121L1PQ3SYA9 428 aa21.69■■□□□ 1.06
HMGB3-205ENST00000455596 CNPY3Q9BT09 278 aa21.69■■□□□ 1.06
HMGB3-205ENST00000455596 TM7SF3Q9NS93 570 aa21.69■■□□□ 1.06
HMGB3-205ENST00000455596 NDFIP2Q9NV92 336 aa21.69■■□□□ 1.06
HMGB3-205ENST00000455596 PARVAQ9NVD7 372 aa21.69■■□□□ 1.06
HMGB3-205ENST00000455596 DNAI1Q9UI46 699 aa21.69■■□□□ 1.06
HMGB3-205ENST00000455596 NEU3Q9UQ49 428 aa21.69■■□□□ 1.06
HMGB3-205ENST00000455596 SNX11Q9Y5W9 270 aa21.69■■□□□ 1.06
HMGB3-205ENST00000455596 GOLGA6L19H0YKK7 550 aa21.68■■□□□ 1.06
HMGB3-205ENST00000455596 PLRG1O43660 514 aaKnown RBP21.68■■□□□ 1.06
HMGB3-205ENST00000455596 SH3BP5O60239 455 aa21.68■■□□□ 1.06
HMGB3-205ENST00000455596 RTN2O75298 545 aa21.68■■□□□ 1.06
HMGB3-205ENST00000455596 PRNPP04156 253 aa21.68■■□□□ 1.06
HMGB3-205ENST00000455596 CTSLP07711 333 aa21.68■■□□□ 1.06
HMGB3-205ENST00000455596 L1CAMP32004 1257 aa21.68■■□□□ 1.06
HMGB3-205ENST00000455596 ARF5P84085 180 aa21.68■■□□□ 1.06
HMGB3-205ENST00000455596 SHC2P98077 582 aa21.68■■□□□ 1.06
HMGB3-205ENST00000455596 KLHL30Q0D2K2 578 aa21.68■■□□□ 1.06
HMGB3-205ENST00000455596 CNTN1Q12860 1018 aa21.68■■□□□ 1.06
HMGB3-205ENST00000455596 FIGNQ5HY92 759 aa21.68■■□□□ 1.06
HMGB3-205ENST00000455596 E4F1Q66K89 784 aaPredicted RBP21.68■■□□□ 1.06
HMGB3-205ENST00000455596 LAYNQ6UX15 382 aa21.68■■□□□ 1.06
HMGB3-205ENST00000455596 ZNF571Q7Z3V5 609 aaPredicted RBP21.68■■□□□ 1.06
HMGB3-205ENST00000455596 NAXDQ8IW45 347 aa21.68■■□□□ 1.06
HMGB3-205ENST00000455596 TMIEQ8NEW7 156 aa21.68■■□□□ 1.06
HMGB3-205ENST00000455596 SLC6A18Q96N87 628 aa21.68■■□□□ 1.06
HMGB3-205ENST00000455596 CNTNAP3BQ96NU0 1288 aa21.68■■□□□ 1.06
HMGB3-205ENST00000455596 ACE2Q9BYF1 805 aaPredicted RBP21.68■■□□□ 1.06
HMGB3-205ENST00000455596 CNTNAP3Q9BZ76 1288 aa21.68■■□□□ 1.06
HMGB3-205ENST00000455596 CEP44Q9C0F1 390 aa21.68■■□□□ 1.06
HMGB3-205ENST00000455596 MAGEH1Q9H213 219 aa21.68■■□□□ 1.06
HMGB3-205ENST00000455596 TNKS2Q9H2K2 1166 aa21.68■■□□□ 1.06
HMGB3-205ENST00000455596 EBF2Q9HAK2 575 aa21.68■■□□□ 1.06
HMGB3-205ENST00000455596 FNDC3AQ9Y2H6 1198 aaKnown RBP21.68■■□□□ 1.06
HMGB3-205ENST00000455596 CXorf51AA0A1B0GTR3 108 aa21.67■■□□□ 1.06
HMGB3-205ENST00000455596 SPAARA0A1B0GVQ0 90 aa21.67■■□□□ 1.06
HMGB3-205ENST00000455596 KPNA3O00505 521 aaPredicted RBP21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms