RNA–Protein interactions for RNA: ENST00000454555.2

LINC00343-203, long intergenic non-protein coding RNA 343, humanhuman

TSL 2 BASIC

Gene LINC00343, Length 1,765 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-203ENST00000454555 TMEM110Q86TL2 294 aa13.55□□□□□ -0.24
LINC00343-203ENST00000454555 TMEM173Q86WV6 379 aaPredicted RBP13.55□□□□□ -0.24
LINC00343-203ENST00000454555 TMEM126BQ8IUX1 230 aa13.55□□□□□ -0.24
LINC00343-203ENST00000454555 KBTBD2Q8IY47 623 aa13.55□□□□□ -0.24
LINC00343-203ENST00000454555 RNF168Q8IYW5 571 aaPredicted RBP13.55□□□□□ -0.24
LINC00343-203ENST00000454555 ADGRF2Q8IZF7 708 aa13.55□□□□□ -0.24
LINC00343-203ENST00000454555 OR6Y1Q8NGX8 325 aa13.55□□□□□ -0.24
LINC00343-203ENST00000454555 AZIN2Q96A70 460 aa13.55□□□□□ -0.24
LINC00343-203ENST00000454555 SUSD3Q96L08 255 aa13.55□□□□□ -0.24
LINC00343-203ENST00000454555 SENP8Q96LD8 212 aa13.55□□□□□ -0.24
LINC00343-203ENST00000454555 BTBD9Q96Q07 612 aa13.55□□□□□ -0.24
LINC00343-203ENST00000454555 SLC4A5Q9BY07 1137 aa13.55□□□□□ -0.24
LINC00343-203ENST00000454555 DNAI2Q9GZS0 605 aa13.55□□□□□ -0.24
LINC00343-203ENST00000454555 BCAP29Q9UHQ4 241 aa13.55□□□□□ -0.24
LINC00343-203ENST00000454555 TSPAN16Q9UKR8 245 aa13.55□□□□□ -0.24
LINC00343-203ENST00000454555 COLQQ9Y215 455 aaPredicted RBP13.55□□□□□ -0.24
LINC00343-203ENST00000454555 ARHGEF37A1IGU5 675 aa13.55□□□□□ -0.24
LINC00343-203ENST00000454555 HMX2A2RU54 273 aa13.55□□□□□ -0.24
LINC00343-203ENST00000454555 CASQ2O14958 399 aaPredicted RBP13.55□□□□□ -0.24
LINC00343-203ENST00000454555 BUD23O43709 281 aaKnown RBP13.55□□□□□ -0.24
LINC00343-203ENST00000454555 PLIN3O60664 434 aa13.55□□□□□ -0.24
LINC00343-203ENST00000454555 ARHGEF15O94989 841 aa13.55□□□□□ -0.24
LINC00343-203ENST00000454555 PGAM1P18669 254 aa13.55□□□□□ -0.24
LINC00343-203ENST00000454555 CYP2F1P24903 491 aa13.55□□□□□ -0.24
LINC00343-203ENST00000454555 BRCC3P46736 316 aa13.55□□□□□ -0.24
LINC00343-203ENST00000454555 HARS2P49590 506 aaKnown RBP13.55□□□□□ -0.24
LINC00343-203ENST00000454555 ERVK-21P61565 698 aa13.55□□□□□ -0.24
LINC00343-203ENST00000454555 MTM1Q13496 603 aa13.55□□□□□ -0.24
LINC00343-203ENST00000454555 BMPR2Q13873 1038 aa13.55□□□□□ -0.24
LINC00343-203ENST00000454555 FRG1Q14331 258 aaKnown RBP13.55□□□□□ -0.24
LINC00343-203ENST00000454555 C15orf59Q2T9L4 293 aaPredicted RBP13.55□□□□□ -0.24
LINC00343-203ENST00000454555 TEDDM1Q5T9Z0 273 aa13.55□□□□□ -0.24
LINC00343-203ENST00000454555 MROH9Q5TGP6 573 aa13.55□□□□□ -0.24
LINC00343-203ENST00000454555 TRNP1Q6NT89 227 aa13.55□□□□□ -0.24
LINC00343-203ENST00000454555 FUT10Q6P4F1 479 aa13.55□□□□□ -0.24
LINC00343-203ENST00000454555 LRRC8BQ6P9F7 803 aa13.55□□□□□ -0.24
LINC00343-203ENST00000454555 PDSS2Q86YH6 399 aa13.55□□□□□ -0.24
LINC00343-203ENST00000454555 TOP6BLQ8N6T0 577 aa13.55□□□□□ -0.24
LINC00343-203ENST00000454555 BCL7CQ8WUZ0 217 aaPredicted RBP13.55□□□□□ -0.24
LINC00343-203ENST00000454555 ISL2Q96A47 359 aa13.55□□□□□ -0.24
LINC00343-203ENST00000454555 TMEM169Q96HH4 297 aa13.55□□□□□ -0.24
LINC00343-203ENST00000454555 KCNK16Q96T55 309 aa13.55□□□□□ -0.24
LINC00343-203ENST00000454555 EPB41L1Q9H4G0 881 aa13.55□□□□□ -0.24
LINC00343-203ENST00000454555 STK39Q9UEW8 545 aa13.55□□□□□ -0.24
LINC00343-203ENST00000454555 MID2Q9UJV3 735 aa13.55□□□□□ -0.24
LINC00343-203ENST00000454555 TBC1D30Q9Y2I9 924 aa13.55□□□□□ -0.24
LINC00343-203ENST00000454555 SNX9Q9Y5X1 595 aa13.55□□□□□ -0.24
LINC00343-203ENST00000454555 CDY1Q9Y6F8 540 aa13.55□□□□□ -0.24
LINC00343-203ENST00000454555 CEP290O15078 2479 aa13.55□□□□□ -0.24
LINC00343-203ENST00000454555 PDE4DIPQ5VU43 2346 aa13.54□□□□□ -0.24
LINC00343-203ENST00000454555 A0A0A0MRY4 1105 aa13.54□□□□□ -0.24
LINC00343-203ENST00000454555 CCDC195A0A1B0GUA6 201 aa13.54□□□□□ -0.24
LINC00343-203ENST00000454555 KLHL33A6NCF5 533 aa13.54□□□□□ -0.24
LINC00343-203ENST00000454555 SLC22A2O15244 555 aa13.54□□□□□ -0.24
LINC00343-203ENST00000454555 AP1G1O43747 822 aa13.54□□□□□ -0.24
LINC00343-203ENST00000454555 OPHN1O60890 802 aa13.54□□□□□ -0.24
LINC00343-203ENST00000454555 FGF3P11487 239 aaPredicted RBP13.54□□□□□ -0.24
LINC00343-203ENST00000454555 TYMPP19971 482 aa13.54□□□□□ -0.24
LINC00343-203ENST00000454555 NDST1P52848 882 aa13.54□□□□□ -0.24
LINC00343-203ENST00000454555 NRLP54845 237 aa13.54□□□□□ -0.24
LINC00343-203ENST00000454555 MED21Q13503 144 aa13.54□□□□□ -0.24
LINC00343-203ENST00000454555 PDCD2Q16342 344 aaPredicted RBP13.54□□□□□ -0.24
LINC00343-203ENST00000454555 PKDCCQ504Y2 493 aa13.54□□□□□ -0.24
LINC00343-203ENST00000454555 SCYL2Q6P3W7 929 aa13.54□□□□□ -0.24
LINC00343-203ENST00000454555 PACS1Q6VY07 963 aa13.54□□□□□ -0.24
LINC00343-203ENST00000454555 DDX53Q86TM3 631 aaKnown RBP13.54□□□□□ -0.24
LINC00343-203ENST00000454555 HASPINQ8TF76 798 aa13.54□□□□□ -0.24
LINC00343-203ENST00000454555 SPATA13Q96N96 652 aa13.54□□□□□ -0.24
LINC00343-203ENST00000454555 KLHL4Q9C0H6 718 aa13.54□□□□□ -0.24
LINC00343-203ENST00000454555 NGRNQ9NPE2 291 aaKnown RBP13.54□□□□□ -0.24
LINC00343-203ENST00000454555 HMGXB4Q9UGU5 601 aa13.54□□□□□ -0.24
LINC00343-203ENST00000454555 PCDHB8Q9UN66 801 aa13.54□□□□□ -0.24
LINC00343-203ENST00000454555 DNAJC16Q9Y2G8 782 aa13.54□□□□□ -0.24
LINC00343-203ENST00000454555 COMMD3-BMI1R4GMX3 469 aa13.54□□□□□ -0.24
LINC00343-203ENST00000454555 SMIM31A0A1B0GVY4 71 aa13.53□□□□□ -0.24
LINC00343-203ENST00000454555 EME2A4GXA9 379 aaPredicted RBP13.53□□□□□ -0.24
LINC00343-203ENST00000454555 EIF4E1BA6NMX2 242 aaKnown RBP13.53□□□□□ -0.24
LINC00343-203ENST00000454555 CYB561D2O14569 222 aa13.53□□□□□ -0.24
LINC00343-203ENST00000454555 SYN3O14994 580 aa13.53□□□□□ -0.24
LINC00343-203ENST00000454555 HUS1O60921 280 aa13.53□□□□□ -0.24
LINC00343-203ENST00000454555 SIN3BO75182 1162 aa13.53□□□□□ -0.24
LINC00343-203ENST00000454555 FGF18O76093 207 aa13.53□□□□□ -0.24
LINC00343-203ENST00000454555 RTN3O95197 1032 aaPredicted RBP13.53□□□□□ -0.24
LINC00343-203ENST00000454555 GSRP00390 522 aa13.53□□□□□ -0.24
LINC00343-203ENST00000454555 CYP11A1P05108 521 aa13.53□□□□□ -0.24
LINC00343-203ENST00000454555 KITP10721 976 aa13.53□□□□□ -0.24
LINC00343-203ENST00000454555 UQCRBP14927 111 aa13.53□□□□□ -0.24
LINC00343-203ENST00000454555 CTNNB1P35222 781 aa13.53□□□□□ -0.24
LINC00343-203ENST00000454555 GRM2Q14416 872 aa13.53□□□□□ -0.24
LINC00343-203ENST00000454555 CDO1Q16878 200 aa13.53□□□□□ -0.24
LINC00343-203ENST00000454555 SOWAHAQ2M3V2 549 aa13.53□□□□□ -0.24
LINC00343-203ENST00000454555 N4BP2L1Q5TBK1 243 aaPredicted RBP13.53□□□□□ -0.24
LINC00343-203ENST00000454555 GRTP1Q5TC63 336 aa13.53□□□□□ -0.24
LINC00343-203ENST00000454555 FAXCQ5TGI0 409 aa13.53□□□□□ -0.24
LINC00343-203ENST00000454555 CES4AQ5XG92 561 aa13.53□□□□□ -0.24
LINC00343-203ENST00000454555 TRMT10BQ6PF06 316 aaKnown RBP13.53□□□□□ -0.24
LINC00343-203ENST00000454555 RASSF3Q86WH2 238 aa13.53□□□□□ -0.24
LINC00343-203ENST00000454555 TMEM86AQ8N2M4 240 aa13.53□□□□□ -0.24
LINC00343-203ENST00000454555 KLHL23Q8NBE8 558 aa13.53□□□□□ -0.24
LINC00343-203ENST00000454555 APPL2Q8NEU8 664 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 670.9 ms